RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 STX19Q8N4C7 294 aa7.78□□□□□ -1.16
TMEM39A-210ENST00000490099 FAM110DQ8TAY7 271 aaPredicted RBP7.78□□□□□ -1.16
TMEM39A-210ENST00000490099 CREB3L1Q96BA8 519 aa7.78□□□□□ -1.16
TMEM39A-210ENST00000490099 KIRREL1Q96J84 757 aa7.78□□□□□ -1.16
TMEM39A-210ENST00000490099 PPIL3Q9H2H8 161 aaKnown RBP7.78□□□□□ -1.16
TMEM39A-210ENST00000490099 LIN7BQ9HAP6 207 aa7.78□□□□□ -1.16
TMEM39A-210ENST00000490099 ZNF286AQ9HBT8 521 aa7.78□□□□□ -1.16
TMEM39A-210ENST00000490099 VCX3AQ9NNX9 186 aa7.78□□□□□ -1.16
TMEM39A-210ENST00000490099 TMEM138Q9NPI0 162 aa7.78□□□□□ -1.16
TMEM39A-210ENST00000490099 CHCHD3Q9NX63 227 aaKnown RBP7.78□□□□□ -1.16
TMEM39A-210ENST00000490099 PSORS1C1Q9UIG5 152 aa7.78□□□□□ -1.16
TMEM39A-210ENST00000490099 A0A087WXM4 84 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 LEUTXA8MZ59 168 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 F2RL2O00254 374 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 RGS10O43665 173 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 XPNPEP2O43895 674 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 HCKP08631 526 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 VSIG10L2P0DP72 767 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 ZNF44P15621 663 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 MYL12AP19105 171 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 SLC35A2P78381 396 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 CD83Q01151 205 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 SCN1BQ07699 218 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 HLA-DRB5Q30154 266 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 BEAN1Q3B7T3 259 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 FBLN7Q53RD9 439 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 TPTE2P1Q5T6R2 138 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 RSBN1Q5VWQ0 802 aaPredicted RBP7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 TMPRSS11AQ6ZMR5 421 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 SLC16A12Q6ZSM3 486 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 AHSA2Q719I0 299 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 TRAPPC6BQ86SZ2 158 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 NDUFA11Q86Y39 141 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 LYPD6Q86Y78 171 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 THNSL2Q86YJ6 484 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 SVOPQ8N4V2 548 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 ZNF565Q8N9K5 539 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 WFDC9Q8NEX5 89 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 OR10A7Q8NGE5 316 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 OR4D6Q8NGJ1 314 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 OR52N1Q8NH53 320 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 OR9G1Q8NH87 305 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 NDNFQ8TB73 568 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 TMEM106AQ96A25 262 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 SMIM19Q96E16 107 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 CPNE2Q96FN4 548 aaPredicted RBP7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 TMEM80Q96HE8 168 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 DUSP21Q9H596 190 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 TAS2R4Q9NYW5 299 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 CLEC2DQ9UHP7 191 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 ZNF281Q9Y2X9 895 aa7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 EXOSC1Q9Y3B2 195 aaKnown RBP7.77□□□□□ -1.17
TMEM39A-210ENST00000490099 TRBV5-7A0A0A0MS05 114 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 PTGES3LE9PB15 166 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 H3BUI4 141 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 FBXO24O75426 580 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 OR2F2O95006 317 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 CDK1P06493 297 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 CD2P06729 351 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 CD28P10747 220 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 BRS3P32247 399 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 CEACAM3P40198 252 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 SOX2P48431 317 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 PRRX1P54821 245 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 ST3GAL4Q11206 333 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 ATXN7L3Q14CW9 347 aaPredicted RBP7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 TCTEX1D4Q5JR98 221 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 HIST2H2BDQ6DRA6 164 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 ZNF773Q6PK81 442 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 PRSS48Q7RTY5 328 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 CDH26Q8IXH8 852 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 C11orf44Q8N8P7 122 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 TSPAN14Q8NG11 270 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 OR13A1Q8NGR1 328 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 PLPPR1Q8TBJ4 325 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 TNFAIP8L1Q8WVP5 186 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 TSEN15Q8WW01 171 aaKnown RBP7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 GGHQ92820 318 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 GHSRQ92847 366 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 PGLYRP3Q96LB9 341 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 RBM14Q96PK6 669 aaKnown RBP7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 NKX3-1Q99801 234 aaPredicted RBP7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 MRPS26Q9BYN8 205 aaKnown RBP7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 BARHL1Q9BZE3 327 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 FKBP14Q9NWM8 211 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 CALYQ9NYX4 217 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 ZNF581Q9P0T4 197 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 SCOCQ9UIL1 159 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 KIF25Q9UIL4 384 aa7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 PRKDCP78527 4128 aaKnown RBP7.76□□□□□ -1.17
TMEM39A-210ENST00000490099 MEIKINA0A087WXM9 373 aa7.75□□□□□ -1.17
TMEM39A-210ENST00000490099 C15orf65H3BRN8 121 aa7.75□□□□□ -1.17
TMEM39A-210ENST00000490099 J3QR06 171 aa7.75□□□□□ -1.17
TMEM39A-210ENST00000490099 MYL12BO14950 172 aa7.75□□□□□ -1.17
TMEM39A-210ENST00000490099 MAGEB3O15480 346 aa7.75□□□□□ -1.17
TMEM39A-210ENST00000490099 CDRT1O95170 752 aa7.75□□□□□ -1.17
TMEM39A-210ENST00000490099 IL1AP01583 271 aa7.75□□□□□ -1.17
TMEM39A-210ENST00000490099 CD1AP06126 327 aa7.75□□□□□ -1.17
TMEM39A-210ENST00000490099 GZMHP20718 246 aa7.75□□□□□ -1.17
TMEM39A-210ENST00000490099 C21orf33P30042 268 aaPredicted RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms