RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 GTF2H4Q92759 462 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 SNAPC3Q92966 411 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 CREB3L1Q96BA8 519 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 ROPN1LQ96C74 230 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 MTERF3Q96E29 417 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 FCRL1Q96LA6 429 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 SEPHS2Q99611 448 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 CPNE1Q99829 537 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 SCRT1Q9BWW7 348 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 GGTLC1Q9BX51 225 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 MFFQ9GZY8 342 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 Q9H521 79 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 BIN3Q9NQY0 253 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 SLC35D1Q9NTN3 355 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 TAS2R1Q9NYW7 299 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 CCDC59Q9P031 241 aaKnown RBP3.58□□□□□ -1.84
SDCBP-205ENST00000447267 P2RX2Q9UBL9 471 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 HAO1Q9UJM8 370 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 RPH3ALQ9UNE2 315 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 CCL27Q9Y4X3 112 aa3.58□□□□□ -1.84
SDCBP-205ENST00000447267 TRAV36DV7A0A075B6V5 113 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 A0A0U1RQV1 116 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 RFPL4AA6NLU0 287 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 LRRN3E7EW58 273 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 RFPL4AL1F8VTS6 287 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 PLPP3O14495 311 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 OR2T1O43869 369 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 MITFO75030 526 aaPredicted RBP3.57□□□□□ -1.84
SDCBP-205ENST00000447267 SPAG7O75391 227 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 C6orf47O95873 294 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 IGHG2P01859 326 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 S100A8P05109 93 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 C2P06681 752 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 ENO1P06733 434 aaKnown RBP3.57□□□□□ -1.84
SDCBP-205ENST00000447267 IGHV1-8P0DP01 117 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 CD36P16671 472 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 CAMLGP49069 296 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 VAMP2P63027 116 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 DLK1P80370 383 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 RUNX1Q01196 453 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 BTN1A1Q13410 526 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 HNF4GQ14541 408 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 PAN3Q58A45 887 aaKnown RBP3.57□□□□□ -1.84
SDCBP-205ENST00000447267 OR2B11Q5JQS5 317 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 FGD3Q5JSP0 725 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 C10orf128Q5T292 105 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 ATAD3CQ5T2N8 411 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 DDI2Q5TDH0 399 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 LIPMQ5VYY2 423 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 STUMQ69YW2 141 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 PLEKHG7Q6ZR37 379 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 ENTHD1Q8IYW4 607 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 EIF1ADQ8N9N8 165 aaKnown RBP3.57□□□□□ -1.84
SDCBP-205ENST00000447267 FBXO36Q8NEA4 188 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 BBS1Q8NFJ9 593 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 OR5T1Q8NG75 326 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 OR4M1Q8NGD0 313 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 OR5K1Q8NHB7 308 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 GLMPQ8WWB7 406 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 OR5P2Q8WZ92 322 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 NPIPB3Q92617 1050 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 SLC38A4Q969I6 547 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 MOAP1Q96BY2 351 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 C12orf43Q96C57 262 aaKnown RBP3.57□□□□□ -1.84
SDCBP-205ENST00000447267 RCN3Q96D15 328 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 SGTBQ96EQ0 304 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 SLC25A44Q96H78 314 aaPredicted RBP3.57□□□□□ -1.84
SDCBP-205ENST00000447267 URB1-AS1Q96HZ7 61 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 SLC35G5Q96KT7 338 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 CCDC115Q96NT0 180 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 TSSK3Q96PN8 268 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 GAFA1Q96PS6 74 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 C2orf88Q9BSF0 95 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 BTBD10Q9BSF8 475 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 DCUN1D5Q9BTE7 237 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 C1orf50Q9BV19 199 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 SLC38A1Q9H2H9 487 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 OR51I1Q9H343 314 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 EVA1AQ9H8M9 152 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 MAP6D1Q9H9H5 199 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 ZNF556Q9HAH1 456 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 SEPSECSQ9HD40 501 aaKnown RBP3.57□□□□□ -1.84
SDCBP-205ENST00000447267 SDHAF2Q9NX18 166 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 IMPAD1Q9NX62 359 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 BABAM2Q9NXR7 383 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 ENPP5Q9UJA9 477 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 VSIG4Q9Y279 399 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 WSB1Q9Y6I7 421 aa3.57□□□□□ -1.84
SDCBP-205ENST00000447267 TNXBP22105 4242 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 A0A087WYN8 130 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 LOC102724200A0A096LPH7 203 aaPredicted RBP3.56□□□□□ -1.84
SDCBP-205ENST00000447267 A0A0B4J293 547 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 TEX13CA0A0J9YWL9 993 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 FAM159BA6NKW6 160 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 DUXAA6NLW8 204 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 A8MT66 165 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 C11orf98E9PRG8 122 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 M0QZK8 103 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 RGS5O15539 181 aa3.56□□□□□ -1.84
SDCBP-205ENST00000447267 ZNF780AO75290 641 aaPredicted RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms