RNA–Protein interactions for RNA: ENST00000432072.6

FN1-209, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-209ENST00000432072 SIPA1L1O43166 1804 aa8.71□□□□□ -1.02
FN1-209ENST00000432072 A0A1W2PPV9 198 aa8.71□□□□□ -1.02
FN1-209ENST00000432072 C7orf72A4D263 438 aa8.71□□□□□ -1.02
FN1-209ENST00000432072 CLEC2LP0C7M8 214 aa8.71□□□□□ -1.02
FN1-209ENST00000432072 LIMS3P0CW19 117 aa8.71□□□□□ -1.02
FN1-209ENST00000432072 LIMS4P0CW20 117 aa8.71□□□□□ -1.02
FN1-209ENST00000432072 RPS4Y1P22090 263 aaKnown RBP8.71□□□□□ -1.02
FN1-209ENST00000432072 LTBRP36941 435 aa8.71□□□□□ -1.02
FN1-209ENST00000432072 FABP5Q01469 135 aa8.71□□□□□ -1.02
FN1-209ENST00000432072 ETFDHQ16134 617 aa8.71□□□□□ -1.02
FN1-209ENST00000432072 PDPNQ86YL7 162 aa8.71□□□□□ -1.02
FN1-209ENST00000432072 RCL1Q9Y2P8 373 aaKnown RBP8.71□□□□□ -1.02
FN1-209ENST00000432072 ROM1Q03395 351 aa8.71□□□□□ -1.02
FN1-209ENST00000432072 ZNF90Q03938 601 aa8.71□□□□□ -1.02
FN1-209ENST00000432072 MESP2Q0VG99 397 aa8.71□□□□□ -1.02
FN1-209ENST00000432072 NECAP1Q8NC96 275 aa8.71□□□□□ -1.02
FN1-209ENST00000432072 OR4Q3Q8NH05 313 aa8.71□□□□□ -1.02
FN1-209ENST00000432072 DDB2Q92466 427 aa8.71□□□□□ -1.02
FN1-209ENST00000432072 RNASE6Q93091 150 aaKnown RBP8.71□□□□□ -1.02
FN1-209ENST00000432072 SLC7A10Q9NS82 523 aa8.71□□□□□ -1.02
FN1-209ENST00000432072 USF3Q68DE3 2245 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 LIPFP07098 398 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 HTR1DP28221 377 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 PCSK4Q6UW60 755 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 RNF122Q9H9V4 155 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 RANGRFQ9HD47 186 aaPredicted RBP8.7□□□□□ -1.02
FN1-209ENST00000432072 HOXB1P14653 301 aaPredicted RBP8.7□□□□□ -1.02
FN1-209ENST00000432072 RPL12P30050 165 aaKnown RBP8.7□□□□□ -1.02
FN1-209ENST00000432072 CD200P41217 278 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 FAM3AP98173 230 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 SSBP1Q04837 148 aaKnown RBP8.7□□□□□ -1.02
FN1-209ENST00000432072 SP6Q3SY56 376 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 FAM106AQ4KMX7 169 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 MAP6Q96JE9 813 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 ANGPTL4Q9BY76 406 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 RHOFQ9HBH0 211 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 FBXL17Q9UF56 701 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 A0A0J9YW62 118 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 LALBAP00709 142 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 PSMB6P28072 239 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 CMPK2Q5EBM0 449 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 CGB2Q6NT52 195 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 RPUSD3Q6P087 351 aaKnown RBP8.7□□□□□ -1.02
FN1-209ENST00000432072 PPP1R32Q7Z5V6 425 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 RPUSD4Q96CM3 377 aaKnown RBP8.7□□□□□ -1.02
FN1-209ENST00000432072 R3HDM4Q96D70 268 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 DUX5Q96PT3 197 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 ABHD14AQ9BUJ0 271 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 PKDREJQ9NTG1 2253 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 CRHP06850 196 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 LCN2P80188 198 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 ENDOGQ14249 297 aaKnown RBP8.7□□□□□ -1.02
FN1-209ENST00000432072 ACSF3Q4G176 576 aaPredicted RBP8.7□□□□□ -1.02
FN1-209ENST00000432072 ATG4DQ86TL0 474 aaPredicted RBP8.7□□□□□ -1.02
FN1-209ENST00000432072 OR1L8Q8NGR8 309 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 PLEKHA2Q9HB19 425 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 UQCC1Q9NVA1 299 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 SOX15O60248 233 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 RPS19P39019 145 aaKnown RBP8.7□□□□□ -1.02
FN1-209ENST00000432072 DERL3Q96Q80 235 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 SIX6O95475 246 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 VSIG10L2P0DP72 767 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 SMAGPQ0VAQ4 97 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 C16orf82Q7Z2V1 217 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 FAM219AQ8IW50 185 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 FAM57AQ8TBR7 257 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 MZB1Q8WU39 189 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 C2orf50Q96LR7 162 aa8.7□□□□□ -1.02
FN1-209ENST00000432072 FGF20Q9NP95 211 aaPredicted RBP8.7□□□□□ -1.02
FN1-209ENST00000432072 CYB5R3P00387 301 aaPredicted RBP8.69□□□□□ -1.02
FN1-209ENST00000432072 HIST1H1DP16402 221 aaKnown RBP8.69□□□□□ -1.02
FN1-209ENST00000432072 OR10A7Q8NGE5 316 aa8.69□□□□□ -1.02
FN1-209ENST00000432072 CD3DP04234 171 aa8.69□□□□□ -1.02
FN1-209ENST00000432072 PTBP1P26599 531 aaKnown RBP eCLIP8.69□□□□□ -1.026e-7■■■□□ 19
FN1-209ENST00000432072 NCR3LG1Q68D85 454 aa8.69□□□□□ -1.02
FN1-209ENST00000432072 TMEM229BQ8NBD8 167 aa8.69□□□□□ -1.02
FN1-209ENST00000432072 ZBTB44Q8NCP5 570 aa8.69□□□□□ -1.02
FN1-209ENST00000432072 SSBP3Q9BWW4 388 aaPredicted RBP8.69□□□□□ -1.02
FN1-209ENST00000432072 CNTD2Q9H8S5 307 aa8.69□□□□□ -1.02
FN1-209ENST00000432072 TNFRSF12AQ9NP84 129 aa8.69□□□□□ -1.02
FN1-209ENST00000432072 C3orf85A0A1B0GTC6 90 aa8.69□□□□□ -1.02
FN1-209ENST00000432072 TMEM272A0A1B0GTI8 110 aa8.69□□□□□ -1.02
FN1-209ENST00000432072 A0A1W2PRX2 142 aa8.69□□□□□ -1.02
FN1-209ENST00000432072 GALR1P47211 349 aa8.69□□□□□ -1.02
FN1-209ENST00000432072 ZNF485Q8NCK3 441 aa8.69□□□□□ -1.02
FN1-209ENST00000432072 PXT1Q8NFP0 134 aa8.69□□□□□ -1.02
FN1-209ENST00000432072 OR4C13Q8NGP0 309 aa8.69□□□□□ -1.02
FN1-209ENST00000432072 MS4A3Q96HJ5 214 aa8.69□□□□□ -1.02
FN1-209ENST00000432072 CABLES2Q9BTV7 478 aa8.69□□□□□ -1.02
FN1-209ENST00000432072 GAB2Q9UQC2 676 aa8.69□□□□□ -1.02
FN1-209ENST00000432072 ZNF727A8MUV8 499 aa8.69□□□□□ -1.02
FN1-209ENST00000432072 J3QT63 122 aa8.69□□□□□ -1.02
FN1-209ENST00000432072 CST7O76096 145 aa8.69□□□□□ -1.02
FN1-209ENST00000432072 TMEM123Q8N131 208 aa8.69□□□□□ -1.02
FN1-209ENST00000432072 OR52M1Q8NGK5 317 aa8.69□□□□□ -1.02
FN1-209ENST00000432072 TMEM165Q9HC07 324 aa8.69□□□□□ -1.02
FN1-209ENST00000432072 CACNG5Q9UF02 275 aa8.69□□□□□ -1.02
FN1-209ENST00000432072 UPK3AO75631 287 aa8.69□□□□□ -1.02
FN1-209ENST00000432072 RAB5CP51148 216 aa8.69□□□□□ -1.02
FN1-209ENST00000432072 ZNF385AQ96PM9 386 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms