RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 ZNF273Q14593 569 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 TBCEQ15813 527 aaPredicted RBP5.19□□□□□ -1.58
USP54-202ENST00000413442 TAF9Q16594 264 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 HSD17B12Q53GQ0 312 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 PRR31Q5SQ13 230 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 C6orf183Q5T699 404 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 DHRS7BQ6IAN0 325 aaPredicted RBP5.19□□□□□ -1.58
USP54-202ENST00000413442 OR2W3Q7Z3T1 314 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 GAPTQ8N292 157 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 FGFRL1Q8N441 504 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 PNKDQ8N490 385 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 JAGN1Q8N5M9 183 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 LINC00311Q8N616 119 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 OR5D18Q8NGL1 313 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 OR6M1Q8NGM8 313 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 OR2T6Q8NHC8 308 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 LINC01006Q8NI28 216 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 NRG4Q8WWG1 115 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 RFT1Q96AA3 541 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 SPACA5Q96QH8 159 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 OR14A2Q96R54 314 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 MGLLQ99685 303 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 URM1Q9BTM9 101 aaKnown RBP5.19□□□□□ -1.58
USP54-202ENST00000413442 DPCDQ9BVM2 203 aaPredicted RBP5.19□□□□□ -1.58
USP54-202ENST00000413442 PRSS22Q9GZN4 317 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 RCC2Q9P258 522 aaKnown RBP5.19□□□□□ -1.58
USP54-202ENST00000413442 MRPS28Q9Y2Q9 187 aaKnown RBP5.19□□□□□ -1.58
USP54-202ENST00000413442 LSM2Q9Y333 95 aaKnown RBP5.19□□□□□ -1.58
USP54-202ENST00000413442 RNF114Q9Y508 228 aa5.19□□□□□ -1.58
USP54-202ENST00000413442 TRAV1-2A0A0B4J238 106 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 TRAV24A0A0B4J272 114 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 ANKRD65E5RJM6 399 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 BUB1B-PAK6H3BSN5 160 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 H3BUX3 64 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 J3QR06 171 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 SPINT2O43291 252 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 TXNL1O43396 289 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 CDRT1O95170 752 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 IL1AP01583 271 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 MT-ND4P03905 459 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 MAS1P04201 325 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 CDK2P24941 298 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 IL3RAP26951 378 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 HTR2CP28335 458 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 GABRA5P31644 462 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 GLIPR1P48060 266 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 EMX1Q04741 257 aaPredicted RBP5.18□□□□□ -1.58
USP54-202ENST00000413442 SLC22A6Q4U2R8 563 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 RSBN1Q5VWQ0 802 aaPredicted RBP5.18□□□□□ -1.58
USP54-202ENST00000413442 AWAT2Q6E213 333 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 GLIPR1L1Q6UWM5 242 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 IZUMO2Q6UXV1 221 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 ZNF497Q6ZNH5 498 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 ZNF367Q7RTV3 350 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 CEACAM19Q7Z692 300 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 TPRA1Q86W33 373 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 OR8H3Q8N146 312 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 Q8N2B8 174 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 SUMF2Q8NBJ7 301 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 OR4C13Q8NGP0 309 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 CAPSLQ8WWF8 208 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 PTX4Q96A99 478 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 COQ2Q96H96 371 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 NEDD4LQ96PU5 975 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 NR1H4Q96RI1 486 aaPredicted RBP5.18□□□□□ -1.58
USP54-202ENST00000413442 CITED1Q99966 193 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 OCSTAMPQ9BR26 566 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 CHCHD6Q9BRQ6 235 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 CCDC90BQ9GZT6 254 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 CHST6Q9GZX3 395 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 PPA2Q9H2U2 334 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 LIN7BQ9HAP6 207 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 IDI2-AS1Q9NZ38 188 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 KCNIP1Q9NZI2 227 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 HSF4Q9ULV5 492 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 TCF19Q9Y242 345 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 KIAA2026Q5HYC2 2103 aa5.18□□□□□ -1.58
USP54-202ENST00000413442 TRAV8-7A0A075B6U6 113 aa5.17□□□□□ -1.58
USP54-202ENST00000413442 MDFIC2A0A1B0GVS7 189 aa5.17□□□□□ -1.58
USP54-202ENST00000413442 TRDV1A0A1B0GX56 115 aa5.17□□□□□ -1.58
USP54-202ENST00000413442 A6NDX4 124 aa5.17□□□□□ -1.58
USP54-202ENST00000413442 LY6LH3BQJ8 138 aa5.17□□□□□ -1.58
USP54-202ENST00000413442 M0QZ24 198 aa5.17□□□□□ -1.58
USP54-202ENST00000413442 F2RL2O00254 374 aa5.17□□□□□ -1.58
USP54-202ENST00000413442 SLC17A2O00624 439 aa5.17□□□□□ -1.58
USP54-202ENST00000413442 ITGB1BP1O14713 200 aa5.17□□□□□ -1.58
USP54-202ENST00000413442 GEMIN2O14893 280 aaKnown RBP5.17□□□□□ -1.58
USP54-202ENST00000413442 SLC22A1O15245 554 aa5.17□□□□□ -1.58
USP54-202ENST00000413442 PIN1P1O15428 100 aa5.17□□□□□ -1.58
USP54-202ENST00000413442 PDCD6O75340 191 aa5.17□□□□□ -1.58
USP54-202ENST00000413442 RGS9O75916 674 aaPredicted RBP5.17□□□□□ -1.58
USP54-202ENST00000413442 RGS11O94810 467 aa5.17□□□□□ -1.58
USP54-202ENST00000413442 TFF1P04155 84 aa5.17□□□□□ -1.58
USP54-202ENST00000413442 GAPDHP04406 335 aaKnown RBP5.17□□□□□ -1.58
USP54-202ENST00000413442 ARSBP15848 533 aa5.17□□□□□ -1.58
USP54-202ENST00000413442 MGMTP16455 207 aa5.17□□□□□ -1.58
USP54-202ENST00000413442 SERPINA2P20848 420 aa5.17□□□□□ -1.58
USP54-202ENST00000413442 FGF9P31371 208 aaPredicted RBP5.17□□□□□ -1.58
USP54-202ENST00000413442 OR3A4PP47883 348 aa5.17□□□□□ -1.58
USP54-202ENST00000413442 SCAND1P57086 179 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms