RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 RAB9BQ9NP90 201 aa11.68□□□□□ -0.54
NIF3L1-205ENST00000409588 SIGLEC9Q9Y336 463 aa11.68□□□□□ -0.54
NIF3L1-205ENST00000409588 LY6LH3BQJ8 138 aa11.67□□□□□ -0.54
NIF3L1-205ENST00000409588 FAM106CPP0CH98 169 aa11.67□□□□□ -0.54
NIF3L1-205ENST00000409588 VSIG10L2P0DP72 767 aa11.67□□□□□ -0.54
NIF3L1-205ENST00000409588 FSTP19883 344 aa11.67□□□□□ -0.54
NIF3L1-205ENST00000409588 MAPK3P27361 379 aaPredicted RBP11.67□□□□□ -0.54
NIF3L1-205ENST00000409588 RBM39Q14498 530 aaKnown RBP11.67□□□□□ -0.54
NIF3L1-205ENST00000409588 PLA1AQ53H76 456 aa11.67□□□□□ -0.54
NIF3L1-205ENST00000409588 STX19Q8N4C7 294 aa11.67□□□□□ -0.54
NIF3L1-205ENST00000409588 OR52M1Q8NGK5 317 aa11.67□□□□□ -0.54
NIF3L1-205ENST00000409588 FBLIM1Q8WUP2 373 aa11.67□□□□□ -0.54
NIF3L1-205ENST00000409588 KIRREL1Q96J84 757 aa11.67□□□□□ -0.54
NIF3L1-205ENST00000409588 DPCDQ9BVM2 203 aaPredicted RBP11.67□□□□□ -0.54
NIF3L1-205ENST00000409588 WNT10AQ9GZT5 417 aa11.67□□□□□ -0.54
NIF3L1-205ENST00000409588 MMP28Q9H239 520 aa11.67□□□□□ -0.54
NIF3L1-205ENST00000409588 IDI2-AS1Q9NZ38 188 aa11.67□□□□□ -0.54
NIF3L1-205ENST00000409588 CLEC2DQ9UHP7 191 aa11.67□□□□□ -0.54
NIF3L1-205ENST00000409588 PSORS1C1Q9UIG5 152 aa11.67□□□□□ -0.54
NIF3L1-205ENST00000409588 KIF25Q9UIL4 384 aa11.67□□□□□ -0.54
NIF3L1-205ENST00000409588 ERGIC3Q9Y282 383 aa11.67□□□□□ -0.54
NIF3L1-205ENST00000409588 SIRT4Q9Y6E7 314 aaPredicted RBP11.67□□□□□ -0.54
NIF3L1-205ENST00000409588 J3QR06 171 aa11.66□□□□□ -0.54
NIF3L1-205ENST00000409588 OR7C1O76099 320 aaPredicted RBP11.66□□□□□ -0.54
NIF3L1-205ENST00000409588 OR2F2O95006 317 aa11.66□□□□□ -0.54
NIF3L1-205ENST00000409588 IL1AP01583 271 aa11.66□□□□□ -0.54
NIF3L1-205ENST00000409588 OPN1MWP04001 364 aa11.66□□□□□ -0.54
NIF3L1-205ENST00000409588 GLAP06280 429 aa11.66□□□□□ -0.54
NIF3L1-205ENST00000409588 OPN1MW2P0DN77 364 aa11.66□□□□□ -0.54
NIF3L1-205ENST00000409588 OPN1MW3P0DN78 364 aa11.66□□□□□ -0.54
NIF3L1-205ENST00000409588 WNT4P56705 351 aa11.66□□□□□ -0.54
NIF3L1-205ENST00000409588 RBM11P57052 281 aaKnown RBP11.66□□□□□ -0.54
NIF3L1-205ENST00000409588 RPS11P62280 158 aaKnown RBP eCLIP11.66□□□□□ -0.54
NIF3L1-205ENST00000409588 DOC2BQ14184 412 aa11.66□□□□□ -0.54
NIF3L1-205ENST00000409588 Q3ZCU0 254 aa11.66□□□□□ -0.54
NIF3L1-205ENST00000409588 PDLIM3Q53GG5 364 aaPredicted RBP11.66□□□□□ -0.54
NIF3L1-205ENST00000409588 ARSJQ5FYB0 599 aaPredicted RBP11.66□□□□□ -0.54
NIF3L1-205ENST00000409588 TPTE2P1Q5T6R2 138 aa11.66□□□□□ -0.54
NIF3L1-205ENST00000409588 RSBN1Q5VWQ0 802 aaPredicted RBP11.66□□□□□ -0.54
NIF3L1-205ENST00000409588 TMEM219Q86XT9 240 aa11.66□□□□□ -0.54
NIF3L1-205ENST00000409588 MS4A15Q8N5U1 240 aa11.66□□□□□ -0.54
NIF3L1-205ENST00000409588 SUMF2Q8NBJ7 301 aa11.66□□□□□ -0.54
NIF3L1-205ENST00000409588 PGLYRP3Q96LB9 341 aa11.66□□□□□ -0.54
NIF3L1-205ENST00000409588 RBM14Q96PK6 669 aaKnown RBP11.66□□□□□ -0.54
NIF3L1-205ENST00000409588 ZNF184Q99676 751 aaPredicted RBP11.66□□□□□ -0.54
NIF3L1-205ENST00000409588 PPIL3Q9H2H8 161 aaKnown RBP11.66□□□□□ -0.54
NIF3L1-205ENST00000409588 ZNF286AQ9HBT8 521 aa11.66□□□□□ -0.54
NIF3L1-205ENST00000409588 CALYQ9NYX4 217 aa11.66□□□□□ -0.54
NIF3L1-205ENST00000409588 GHRLQ9UBU3 117 aa11.66□□□□□ -0.54
NIF3L1-205ENST00000409588 TRBV5-7A0A0A0MS05 114 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 FAM90A10PA6NDY2 464 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 FAM90A18PA6NE21 464 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 FAM90A16PA6NEW6 464 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 FAM90A20PA6NIJ5 464 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 FAM90A7PA6NKC0 464 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 FAM90A12PA8MX19 464 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 FAM90A5PA8MXJ8 464 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 FAM90A23PA8MXZ1 464 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 MYL12BO14950 172 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 ORC5O43913 435 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 FBXO24O75426 580 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 CA11O75493 328 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 CDRT1O95170 752 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 LALBAP00709 142 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 FAM90A15PP0C7V4 464 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 FAM90A13PP0C7W8 464 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 FAM90A14PP0C7W9 464 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 FAM90A24PP0C7X0 464 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 NFYBP25208 207 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 GLP1RP43220 463 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 VDAC2P45880 294 aaPredicted RBP11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 OR3A4PP47883 348 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 RAB7AP51149 207 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 BLCAPP62952 87 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 MADCAM1Q13477 382 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 TMEM30BQ3MIR4 351 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 PIGYQ3MUY2 71 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 NDUFA11Q86Y39 141 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 NANOGP1Q8N7R0 232 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 NKAIN3Q8N8D7 197 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 C8orf31Q8N9H6 132 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 OR4F17Q8NGA8 305 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 FAM110DQ8TAY7 271 aaPredicted RBP11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 WIPF2Q8TF74 440 aaPredicted RBP11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 TFAP2CQ92754 450 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 RPEQ96AT9 228 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 OR4F4Q96R69 305 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 UQCC2Q9BRT2 126 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 WNK1Q9H4A3 2382 aa11.65□□□□□ -0.54
NIF3L1-205ENST00000409588 TET2Q6N021 2002 aaPredicted RBP11.64□□□□□ -0.55
NIF3L1-205ENST00000409588 TMEM30CPA0ZSE6 113 aa11.64□□□□□ -0.55
NIF3L1-205ENST00000409588 FAM90A9PA6NNJ1 464 aa11.64□□□□□ -0.55
NIF3L1-205ENST00000409588 MCRIP1C9JLW8 97 aa11.64□□□□□ -0.55
NIF3L1-205ENST00000409588 XPNPEP2O43895 674 aa11.64□□□□□ -0.55
NIF3L1-205ENST00000409588 TSPAN15O95858 294 aa11.64□□□□□ -0.55
NIF3L1-205ENST00000409588 CELP19835 753 aa11.64□□□□□ -0.55
NIF3L1-205ENST00000409588 GPR50Q13585 617 aa11.64□□□□□ -0.55
NIF3L1-205ENST00000409588 OR8H3Q8N146 312 aa11.64□□□□□ -0.55
NIF3L1-205ENST00000409588 OR13A1Q8NGR1 328 aa11.64□□□□□ -0.55
NIF3L1-205ENST00000409588 OR10K1Q8NGX5 313 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 215.5 ms