RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 PARP11Q9NR21 331 aa20.35■□□□□ 0.85
PABPN1-202ENST00000397276 DEDDO75618 318 aa20.35■□□□□ 0.85
PABPN1-202ENST00000397276 IL18BPO95998 194 aa20.35■□□□□ 0.85
PABPN1-202ENST00000397276 ZNF561Q8N587 486 aa20.35■□□□□ 0.85
PABPN1-202ENST00000397276 SPRR3Q9UBC9 169 aa20.35■□□□□ 0.85
PABPN1-202ENST00000397276 CST4P01036 141 aa20.34■□□□□ 0.85
PABPN1-202ENST00000397276 PPYP01298 95 aa20.34■□□□□ 0.85
PABPN1-202ENST00000397276 SCTP09683 121 aa20.34■□□□□ 0.85
PABPN1-202ENST00000397276 WNT5AP41221 380 aa20.34■□□□□ 0.85
PABPN1-202ENST00000397276 ZNF616Q08AN1 781 aa20.34■□□□□ 0.85
PABPN1-202ENST00000397276 MOB3AQ96BX8 217 aa20.34■□□□□ 0.85
PABPN1-202ENST00000397276 PRRX2Q99811 253 aa20.34■□□□□ 0.85
PABPN1-202ENST00000397276 TRAPPC2LH3BP13 241 aa20.34■□□□□ 0.85
PABPN1-202ENST00000397276 MBPP02686 304 aaPredicted RBP20.34■□□□□ 0.85
PABPN1-202ENST00000397276 MT-ND4LP03901 98 aa20.34■□□□□ 0.85
PABPN1-202ENST00000397276 APLNRP35414 380 aa20.34■□□□□ 0.85
PABPN1-202ENST00000397276 SRSF6Q13247 344 aaKnown RBP20.34■□□□□ 0.85
PABPN1-202ENST00000397276 CLN3Q13286 438 aa20.34■□□□□ 0.85
PABPN1-202ENST00000397276 SPIN3Q5JUX0 258 aa20.34■□□□□ 0.85
PABPN1-202ENST00000397276 NCMAPQ5T1S8 102 aa20.34■□□□□ 0.85
PABPN1-202ENST00000397276 OR2T2Q6IF00 324 aa20.34■□□□□ 0.85
PABPN1-202ENST00000397276 EIF5AL1Q6IS14 154 aaKnown RBP20.34■□□□□ 0.85
PABPN1-202ENST00000397276 OR52M1Q8NGK5 317 aa20.34■□□□□ 0.85
PABPN1-202ENST00000397276 TUBD1Q9UJT1 453 aa20.34■□□□□ 0.85
PABPN1-202ENST00000397276 A0A1W2PPE2 198 aa20.34■□□□□ 0.85
PABPN1-202ENST00000397276 ZNF766Q5HY98 468 aa20.34■□□□□ 0.85
PABPN1-202ENST00000397276 C17orf78Q8N4C9 275 aa20.34■□□□□ 0.85
PABPN1-202ENST00000397276 ZFP62Q8NB50 900 aaPredicted RBP20.34■□□□□ 0.85
PABPN1-202ENST00000397276 TP53RKQ96S44 253 aa20.34■□□□□ 0.85
PABPN1-202ENST00000397276 HS3ST1O14792 307 aa20.33■□□□□ 0.85
PABPN1-202ENST00000397276 NDUFS6O75380 124 aaKnown RBP20.33■□□□□ 0.85
PABPN1-202ENST00000397276 FGF12P61328 243 aa20.33■□□□□ 0.85
PABPN1-202ENST00000397276 TRIP6Q15654 476 aaKnown RBP20.33■□□□□ 0.85
PABPN1-202ENST00000397276 TTC28Q96AY4 2481 aa20.33■□□□□ 0.84
PABPN1-202ENST00000397276 TRGV5A0A0B4J1U4 118 aa20.33■□□□□ 0.84
PABPN1-202ENST00000397276 IGHV3-64DA0A0J9YX35 117 aa20.33■□□□□ 0.84
PABPN1-202ENST00000397276 TSPAN15O95858 294 aa20.33■□□□□ 0.84
PABPN1-202ENST00000397276 LIAT1Q6ZQX7 453 aa20.33■□□□□ 0.84
PABPN1-202ENST00000397276 GALNT14Q96FL9 552 aa20.33■□□□□ 0.84
PABPN1-202ENST00000397276 WDYHV1Q96HA8 205 aa20.33■□□□□ 0.84
PABPN1-202ENST00000397276 SYT3Q9BQG1 590 aa20.33■□□□□ 0.84
PABPN1-202ENST00000397276 SCRT1Q9BWW7 348 aa20.33■□□□□ 0.84
PABPN1-202ENST00000397276 EIF5A2Q9GZV4 153 aaKnown RBP20.33■□□□□ 0.84
PABPN1-202ENST00000397276 COX5BP10606 129 aa20.32■□□□□ 0.84
PABPN1-202ENST00000397276 MKXQ8IYA7 352 aa20.32■□□□□ 0.84
PABPN1-202ENST00000397276 MSI2Q96DH6 328 aaKnown RBP20.32■□□□□ 0.84
PABPN1-202ENST00000397276 KPTNQ9Y664 436 aa20.32■□□□□ 0.84
PABPN1-202ENST00000397276 EP300Q09472 2414 aaPredicted RBP20.32■□□□□ 0.84
PABPN1-202ENST00000397276 LAMA5O15230 3695 aa20.32■□□□□ 0.84
PABPN1-202ENST00000397276 KMT2EQ8IZD2 1858 aa20.32■□□□□ 0.84
PABPN1-202ENST00000397276 SLC22A20A6NK97 555 aa20.32■□□□□ 0.84
PABPN1-202ENST00000397276 RAB5AP20339 215 aa20.32■□□□□ 0.84
PABPN1-202ENST00000397276 CA6P23280 308 aa20.32■□□□□ 0.84
PABPN1-202ENST00000397276 MDP1Q86V88 176 aa20.32■□□□□ 0.84
PABPN1-202ENST00000397276 OR51M1Q9H341 326 aa20.32■□□□□ 0.84
PABPN1-202ENST00000397276 IGHV2-5P01817 119 aa20.31■□□□□ 0.84
PABPN1-202ENST00000397276 RNF212Q495C1 297 aa20.31■□□□□ 0.84
PABPN1-202ENST00000397276 GCNT2Q8N0V5 402 aa20.31■□□□□ 0.84
PABPN1-202ENST00000397276 RDH5Q92781 318 aa20.31■□□□□ 0.84
PABPN1-202ENST00000397276 METTL1Q9UBP6 276 aaKnown RBP20.31■□□□□ 0.84
PABPN1-202ENST00000397276 TAAR5O14804 337 aa20.31■□□□□ 0.84
PABPN1-202ENST00000397276 PAX6P26367 422 aa20.31■□□□□ 0.84
PABPN1-202ENST00000397276 SNCAP37840 140 aa20.31■□□□□ 0.84
PABPN1-202ENST00000397276 GUK1Q16774 197 aa20.31■□□□□ 0.84
PABPN1-202ENST00000397276 CACNA1HO95180 2353 aa20.3■□□□□ 0.84
PABPN1-202ENST00000397276 ANKRD30BLA7E2S9 258 aa20.3■□□□□ 0.84
PABPN1-202ENST00000397276 WISP2O76076 250 aa20.3■□□□□ 0.84
PABPN1-202ENST00000397276 EIF5AP63241 154 aaKnown RBP20.3■□□□□ 0.84
PABPN1-202ENST00000397276 OR1K1Q8NGR3 316 aa20.3■□□□□ 0.84
PABPN1-202ENST00000397276 SUCNR1Q9BXA5 334 aa20.3■□□□□ 0.84
PABPN1-202ENST00000397276 IGHV2-70P01814 119 aa20.3■□□□□ 0.84
PABPN1-202ENST00000397276 GNRHRP30968 328 aa20.3■□□□□ 0.84
PABPN1-202ENST00000397276 FBXW9Q5XUX1 488 aa20.3■□□□□ 0.84
PABPN1-202ENST00000397276 MYPOPQ86VE0 399 aaPredicted RBP20.3■□□□□ 0.84
PABPN1-202ENST00000397276 SLC35G3Q8N808 338 aa20.3■□□□□ 0.84
PABPN1-202ENST00000397276 OR5A2Q8NGI9 324 aa20.3■□□□□ 0.84
PABPN1-202ENST00000397276 WFDC1Q9HC57 220 aa20.3■□□□□ 0.84
PABPN1-202ENST00000397276 Q9N2K0 584 aa20.3■□□□□ 0.84
PABPN1-202ENST00000397276 FBXO7Q9Y3I1 522 aa20.3■□□□□ 0.84
PABPN1-202ENST00000397276 NKX2-8O15522 239 aa20.29■□□□□ 0.84
PABPN1-202ENST00000397276 CELA3BP08861 270 aa20.29■□□□□ 0.84
PABPN1-202ENST00000397276 FBXW12Q6X9E4 464 aa20.29■□□□□ 0.84
PABPN1-202ENST00000397276 LGI3Q8N145 548 aa20.29■□□□□ 0.84
PABPN1-202ENST00000397276 Q8NFD4 153 aa20.29■□□□□ 0.84
PABPN1-202ENST00000397276 LYPD6BQ8NI32 183 aa20.29■□□□□ 0.84
PABPN1-202ENST00000397276 CD300LFQ8TDQ1 290 aa20.29■□□□□ 0.84
PABPN1-202ENST00000397276 C18orf12Q96KH6 178 aa20.29■□□□□ 0.84
PABPN1-202ENST00000397276 SH3BGRL3Q9H299 93 aa20.29■□□□□ 0.84
PABPN1-202ENST00000397276 RFNGQ9Y644 331 aa20.29■□□□□ 0.84
PABPN1-202ENST00000397276 RHBDL1O75783 438 aa20.29■□□□□ 0.84
PABPN1-202ENST00000397276 CCL11P51671 97 aa20.29■□□□□ 0.84
PABPN1-202ENST00000397276 OR5P3Q8WZ94 311 aa20.29■□□□□ 0.84
PABPN1-202ENST00000397276 C3orf85A0A1B0GTC6 90 aa20.29■□□□□ 0.84
PABPN1-202ENST00000397276 MPPED1O15442 326 aa20.29■□□□□ 0.84
PABPN1-202ENST00000397276 SS18L1O75177 396 aaPredicted RBP20.29■□□□□ 0.84
PABPN1-202ENST00000397276 JTBO76095 146 aa20.29■□□□□ 0.84
PABPN1-202ENST00000397276 OR13C7P0DN81 318 aa20.29■□□□□ 0.84
PABPN1-202ENST00000397276 HERPUD1Q15011 391 aa20.29■□□□□ 0.84
PABPN1-202ENST00000397276 C20orf204Q6ZNR8 217 aa20.29■□□□□ 0.84
PABPN1-202ENST00000397276 TK1P04183 234 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms