RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 ZNF703Q9H7S9 590 aaPredicted RBP4.31□□□□□ -1.72
PCDH9-201ENST00000377861 SAP30LQ9HAJ7 183 aa4.31□□□□□ -1.72
PCDH9-201ENST00000377861 C4AP0C0L4 1744 aa4.31□□□□□ -1.72
PCDH9-201ENST00000377861 K7EQS6 105 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 GAGE1Q13065 139 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 LIPCP11150 499 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 TMEM186Q96B77 213 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 SLC23A3Q6PIS1 610 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 ZNF721Q8TF20 911 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 WDR13Q9H1Z4 485 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 RNF126Q9BV68 326 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 DNAJC4Q9NNZ3 241 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 JPT1Q9UK76 154 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 TMEM231Q9H6L2 316 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 ELOVL5Q9NYP7 299 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 OOSP1A8MZH6 123 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 MRPL14Q6P1L8 145 aaKnown RBP4.3□□□□□ -1.72
PCDH9-201ENST00000377861 TSPAN32Q96QS1 320 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 TCF24Q7RTU0 167 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 FGFRL1Q8N441 504 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 QTRT1Q9BXR0 403 aaKnown RBP4.3□□□□□ -1.72
PCDH9-201ENST00000377861 BOLA1Q9Y3E2 137 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 MYH2Q9UKX2 1941 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 SLC25A38Q96DW6 304 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 CLDN12P56749 244 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 A0A087X0M5 115 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 A0A1B0GX30 115 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 PGGT1BP53609 377 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 A0A0B4J293 547 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 NPY1RP25929 384 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 ZNF738Q8NE65 137 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 ZPLD1Q8TCW7 415 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 A0A1W2PRE2 83 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 C5orf49A4QMS7 147 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 FRS3O43559 492 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 IL11P20809 199 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 CEACAM6P40199 344 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 FAM24BQ8N5W8 94 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 OR13C5Q8NGS8 318 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 FBXL17Q9UF56 701 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 LRRC75BQ2VPJ9 315 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 ANKRD37Q7Z713 158 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 C17orf51A8MQB3 221 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 AREGP15514 252 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 A8MU76 341 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 PIN1P1O15428 100 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 UCNP55089 124 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 FAM206AQ9NX38 181 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 PGLYRP1O75594 196 aaPredicted RBP4.3□□□□□ -1.72
PCDH9-201ENST00000377861 PPP1CBP62140 327 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 OR4C13Q8NGP0 309 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 NKX6-3A6NJ46 265 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 ARG2P78540 354 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 TINAGL1Q9GZM7 467 aaPredicted RBP4.3□□□□□ -1.72
PCDH9-201ENST00000377861 A0A1W2PQF6 199 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 FCN1O00602 326 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 RHBDL1O75783 438 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 USF1P22415 310 aaPredicted RBP4.3□□□□□ -1.72
PCDH9-201ENST00000377861 TGIF2LXQ8IUE1 241 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 TAF15Q92804 592 aaKnown RBP eCLIP4.3□□□□□ -1.72
PCDH9-201ENST00000377861 H3BML4 177 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 KBTBD11O94819 623 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 CITED1Q99966 193 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 TRAPPC1Q9Y5R8 145 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 SYNGR1O43759 233 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 SLC38A11Q08AI6 406 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 GFRA4Q9GZZ7 299 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 SLC25A18Q9H1K4 315 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 C9JCJ5 164 aa4.3□□□□□ -1.72
PCDH9-201ENST00000377861 CDC14CA4D256 554 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 HOXB3P14651 431 aaPredicted RBP4.29□□□□□ -1.72
PCDH9-201ENST00000377861 HLA-DRB5Q30154 266 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 GCSAMQ8N6F7 178 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 NEURL1O76050 574 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 TNFRSF9Q07011 255 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 FAM180BQ6P0A1 224 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 LRRC75AQ8NAA5 344 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 ATG101Q9BSB4 218 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 RSG1Q9BU20 258 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 SMPD2O60906 423 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 LINC00614P0C842 121 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 DDTP30046 118 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 RHOGP84095 191 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 TMEM54Q969K7 222 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 HSPB7Q9UBY9 170 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 ZG16O60844 167 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 NTN1O95631 604 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 FOXL2NBQ6ZUU3 175 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 WDFY1Q8IWB7 410 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 C12orf76Q8N812 135 aaPredicted RBP4.29□□□□□ -1.72
PCDH9-201ENST00000377861 LANCL2Q9NS86 450 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 J3QR06 171 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 ATP6V0CP27449 155 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 GRAMD2BQ96HH9 432 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 RFLNAQ6ZTI6 216 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 MRPS16Q9Y3D3 137 aaKnown RBP4.29□□□□□ -1.72
PCDH9-201ENST00000377861 LIFP15018 202 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 BEX1Q9HBH7 125 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 OSTCQ9NRP0 149 aa4.29□□□□□ -1.72
PCDH9-201ENST00000377861 HSBP1O75506 76 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms