RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 LGALS14Q8TCE9 139 aa9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 AP3S1Q92572 193 aa9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 UPRTQ96BW1 309 aa9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 ISOC1Q96CN7 298 aa9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 RAB3CQ96E17 227 aa9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 ZNF714Q96N38 554 aa9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 SIRPDQ9H106 197 aa9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 GAL3ST2Q9H3Q3 398 aa9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 RIMS4Q9H426 269 aaPredicted RBP9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 HEXA-AS1Q9H8Q6 139 aa9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 DIABLOQ9NR28 239 aa9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 TRAPPC2LQ9UL33 140 aa9.8□□□□□ -0.84
SPTLC1-202ENST00000337841 A0A0A6YYD4 124 aa9.79□□□□□ -0.84
SPTLC1-202ENST00000337841 ZNF729A6NN14 1252 aaPredicted RBP9.79□□□□□ -0.84
SPTLC1-202ENST00000337841 C17orf98A8MV24 154 aa9.79□□□□□ -0.84
SPTLC1-202ENST00000337841 CRLF1O75462 422 aa9.79□□□□□ -0.84
SPTLC1-202ENST00000337841 RBP4P02753 201 aa9.79□□□□□ -0.84
SPTLC1-202ENST00000337841 CCL3L1P16619 93 aa9.79□□□□□ -0.84
SPTLC1-202ENST00000337841 BPIFB3P59826 476 aa9.79□□□□□ -0.84
SPTLC1-202ENST00000337841 ERVFRD-1P60508 538 aa9.79□□□□□ -0.84
SPTLC1-202ENST00000337841 MRPS15P82914 257 aaKnown RBP9.79□□□□□ -0.84
SPTLC1-202ENST00000337841 PLA2G7Q13093 441 aa9.79□□□□□ -0.84
SPTLC1-202ENST00000337841 ZNF273Q14593 569 aa9.79□□□□□ -0.84
SPTLC1-202ENST00000337841 SPCS2Q15005 226 aa9.79□□□□□ -0.84
SPTLC1-202ENST00000337841 NCR3LG1Q68D85 454 aa9.79□□□□□ -0.84
SPTLC1-202ENST00000337841 LURAP1LQ8IV03 231 aa9.79□□□□□ -0.84
SPTLC1-202ENST00000337841 OR5H6Q8NGV6 325 aa9.79□□□□□ -0.84
SPTLC1-202ENST00000337841 S100A16Q96FQ6 103 aaKnown RBP9.79□□□□□ -0.84
SPTLC1-202ENST00000337841 ARHGAP5-AS1Q96IT6 56 aa9.79□□□□□ -0.84
SPTLC1-202ENST00000337841 SULT4A1Q9BR01 284 aa9.79□□□□□ -0.84
SPTLC1-202ENST00000337841 PECRQ9BY49 303 aa9.79□□□□□ -0.84
SPTLC1-202ENST00000337841 RAB9BQ9NP90 201 aa9.79□□□□□ -0.84
SPTLC1-202ENST00000337841 RHBDL2Q9NX52 303 aa9.79□□□□□ -0.84
SPTLC1-202ENST00000337841 KCNIP1Q9NZI2 227 aa9.79□□□□□ -0.84
SPTLC1-202ENST00000337841 A0A0A6YYH2 397 aa9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 KBTBD11-OT1A0A1B0GTJ5 212 aa9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 SMIM31A0A1B0GVY4 71 aa9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 A6NJ64 397 aa9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 POM121CA8CG34 1229 aa9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 FOXI3A8MTJ6 420 aaPredicted RBP9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 RAB27BO00194 218 aa9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 MMP9P14780 707 aa9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 SRD5A1P18405 259 aa9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 FPR2P25090 351 aa9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 GUCA2AQ02747 115 aa9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 CDNFQ49AH0 187 aa9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 C6orf183Q5T699 404 aa9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 GPR157Q5UAW9 335 aa9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 OR52W1Q6IF63 320 aa9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 TRAT1Q6PIZ9 186 aa9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 C1orf229Q6ZS94 237 aaPredicted RBP9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 VMO1Q7Z5L0 202 aa9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 Q8N7P7 452 aa9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 SAMD12Q8N8I0 201 aa9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 CCDC107Q8WV48 283 aa9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 LHX4Q969G2 390 aa9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 CMTM3Q96MX0 182 aa9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 TBX15Q96SF7 602 aa9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 UNKLQ9H9P5 680 aaKnown RBP9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 CHMP1AQ9HD42 196 aaPredicted RBP9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 COMMD3Q9UBI1 195 aa9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 RSL24D1Q9UHA3 163 aaKnown RBP9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 NUP50Q9UKX7 468 aa9.78□□□□□ -0.84
SPTLC1-202ENST00000337841 MEX3AA1L020 520 aaKnown RBP9.77□□□□□ -0.85
SPTLC1-202ENST00000337841 H3BMQ9 156 aa9.77□□□□□ -0.85
SPTLC1-202ENST00000337841 ZNF701M0R085 212 aaPredicted RBP9.77□□□□□ -0.85
SPTLC1-202ENST00000337841 ORC5O43913 435 aa9.77□□□□□ -0.85
SPTLC1-202ENST00000337841 CD3GP09693 182 aa9.77□□□□□ -0.85
SPTLC1-202ENST00000337841 CGB3P0DN86 165 aa9.77□□□□□ -0.85
SPTLC1-202ENST00000337841 CGB7P0DN87 165 aa9.77□□□□□ -0.85
SPTLC1-202ENST00000337841 TALDO1P37837 337 aa9.77□□□□□ -0.85
SPTLC1-202ENST00000337841 GLP1RP43220 463 aa9.77□□□□□ -0.85
SPTLC1-202ENST00000337841 DLX6P56179 175 aa9.77□□□□□ -0.85
SPTLC1-202ENST00000337841 PLAC9Q5JTB6 97 aa9.77□□□□□ -0.85
SPTLC1-202ENST00000337841 UBE2NLQ5JXB2 153 aa9.77□□□□□ -0.85
SPTLC1-202ENST00000337841 IL17RELQ6ZVW7 336 aa9.77□□□□□ -0.85
SPTLC1-202ENST00000337841 GAPTQ8N292 157 aa9.77□□□□□ -0.85
SPTLC1-202ENST00000337841 C11orf42Q8N5U0 333 aa9.77□□□□□ -0.85
SPTLC1-202ENST00000337841 OR13A1Q8NGR1 328 aa9.77□□□□□ -0.85
SPTLC1-202ENST00000337841 OR13D1Q8NGV5 346 aa9.77□□□□□ -0.85
SPTLC1-202ENST00000337841 OR4K15Q8NH41 348 aa9.77□□□□□ -0.85
SPTLC1-202ENST00000337841 MRGPRDQ8TDS7 321 aa9.77□□□□□ -0.85
SPTLC1-202ENST00000337841 ARL11Q969Q4 196 aa9.77□□□□□ -0.85
SPTLC1-202ENST00000337841 DGCR14Q96DF8 476 aaKnown RBP9.77□□□□□ -0.85
SPTLC1-202ENST00000337841 CMSS1Q9BQ75 279 aaKnown RBP9.77□□□□□ -0.85
SPTLC1-202ENST00000337841 MS4A7Q9GZW8 240 aaPredicted RBP9.77□□□□□ -0.85
SPTLC1-202ENST00000337841 ABCG5Q9H222 651 aa9.77□□□□□ -0.85
SPTLC1-202ENST00000337841 SIRT7Q9NRC8 400 aa9.77□□□□□ -0.85
SPTLC1-202ENST00000337841 HIVEP2P31629 2446 aa9.77□□□□□ -0.85
SPTLC1-202ENST00000337841 YLPM1P49750 1951 aaKnown RBP9.77□□□□□ -0.85
SPTLC1-202ENST00000337841 A0A075B6Q4 140 aa9.76□□□□□ -0.85
SPTLC1-202ENST00000337841 TRAV18A0A075B6X5 111 aa9.76□□□□□ -0.85
SPTLC1-202ENST00000337841 TRAV39A0A0B4J263 110 aa9.76□□□□□ -0.85
SPTLC1-202ENST00000337841 CENPVL3A0A0U1RRI6 287 aa9.76□□□□□ -0.85
SPTLC1-202ENST00000337841 SERPINE3A8MV23 424 aa9.76□□□□□ -0.85
SPTLC1-202ENST00000337841 SPINT2O43291 252 aa9.76□□□□□ -0.85
SPTLC1-202ENST00000337841 GSTP1P09211 210 aaKnown RBP9.76□□□□□ -0.85
SPTLC1-202ENST00000337841 IGHV1-8P0DP01 117 aa9.76□□□□□ -0.85
SPTLC1-202ENST00000337841 HIST1H1DP16402 221 aaKnown RBP9.76□□□□□ -0.85
SPTLC1-202ENST00000337841 GNB3P16520 340 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms