RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 TSPAN15O95858 294 aa9.87□□□□□ -0.83
PTPN2-201ENST00000309660 AKR1C3P42330 323 aa9.87□□□□□ -0.83
PTPN2-201ENST00000309660 NKX2-1P43699 371 aaPredicted RBP9.87□□□□□ -0.83
PTPN2-201ENST00000309660 CAMLGP49069 296 aa9.87□□□□□ -0.83
PTPN2-201ENST00000309660 ALKBH6Q3KRA9 238 aa9.87□□□□□ -0.83
PTPN2-201ENST00000309660 CXorf66Q5JRM2 361 aaPredicted RBP9.87□□□□□ -0.83
PTPN2-201ENST00000309660 TMEM178AQ8NBL3 297 aa9.87□□□□□ -0.83
PTPN2-201ENST00000309660 OR5P3Q8WZ94 311 aa9.87□□□□□ -0.83
PTPN2-201ENST00000309660 PLEKHA2Q9HB19 425 aa9.87□□□□□ -0.83
PTPN2-201ENST00000309660 CDK2AP1O14519 115 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 DEGS1O15121 323 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 VAMP2P63027 116 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 TBC1D28Q2M2D7 210 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 LDLRAD3Q86YD5 345 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 CMTM1Q8IZ96 169 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 C18orf12Q96KH6 178 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 WFDC1Q9HC57 220 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 PLA2G2EQ9NZK7 142 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 ATPIF1Q9UII2 106 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 ERRFI1Q9UJM3 462 aaPredicted RBP9.86□□□□□ -0.83
PTPN2-201ENST00000309660 KCNS2Q9ULS6 477 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 FZR1Q9UM11 496 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 GTF3C1Q12789 2109 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 KIR2DS1A0A191URI9 304 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 H7C1Q1 480 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 CDIPTO14735 213 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 NFYBP25208 207 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 KIR2DS4P43632 304 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 NPBWR1P48145 328 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 KIR2DS1Q14954 304 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 SPAG16Q8N0X2 631 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 IP6K3Q96PC2 410 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 RSRP1Q9BUV0 290 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 EIF5A2Q9GZV4 153 aaKnown RBP9.86□□□□□ -0.83
PTPN2-201ENST00000309660 TMED3Q9Y3Q3 217 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 CADP27708 2225 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 IGKV1-6A0A0C4DH72 117 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 TRDCB7Z8K6 153 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 RNASEK-C17orf49H0YIS7 233 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 TSPAN9O75954 239 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 AGFG2O95081 481 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 SFTA3P0C7M3 94 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 MIDNQ504T8 468 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 TMEM182Q6ZP80 229 aaPredicted RBP9.86□□□□□ -0.83
PTPN2-201ENST00000309660 FDCSPQ8NFU4 85 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 OR10J5Q8NHC4 309 aa9.86□□□□□ -0.83
PTPN2-201ENST00000309660 CNOT4O95628 575 aaKnown RBP9.85□□□□□ -0.83
PTPN2-201ENST00000309660 COX5BP10606 129 aa9.85□□□□□ -0.83
PTPN2-201ENST00000309660 CEBPDP49716 269 aaPredicted RBP9.85□□□□□ -0.83
PTPN2-201ENST00000309660 MPV17LQ2QL34 196 aa9.85□□□□□ -0.83
PTPN2-201ENST00000309660 FAM180AQ6UWF9 173 aa9.85□□□□□ -0.83
PTPN2-201ENST00000309660 LOXL4Q96JB6 756 aa9.85□□□□□ -0.83
PTPN2-201ENST00000309660 AKR1E2Q96JD6 320 aa9.85□□□□□ -0.83
PTPN2-201ENST00000309660 TMEM222Q9H0R3 208 aa9.85□□□□□ -0.83
PTPN2-201ENST00000309660 FAM212BQ9NTI7 297 aaPredicted RBP9.85□□□□□ -0.83
PTPN2-201ENST00000309660 TRAPPC2LQ9UL33 140 aa9.85□□□□□ -0.83
PTPN2-201ENST00000309660 ZDHHC8Q9ULC8 765 aa9.85□□□□□ -0.83
PTPN2-201ENST00000309660 PPP1R3CQ9UQK1 317 aa9.85□□□□□ -0.83
PTPN2-201ENST00000309660 LAMA5O15230 3695 aa9.85□□□□□ -0.83
PTPN2-201ENST00000309660 A6NLC8 198 aa9.85□□□□□ -0.83
PTPN2-201ENST00000309660 GPR137BO60478 399 aa9.85□□□□□ -0.83
PTPN2-201ENST00000309660 NXPH2O95156 264 aa9.85□□□□□ -0.83
PTPN2-201ENST00000309660 NAPSAO96009 420 aa9.85□□□□□ -0.83
PTPN2-201ENST00000309660 PVALBP20472 110 aaPredicted RBP9.85□□□□□ -0.83
PTPN2-201ENST00000309660 SULT1A2P50226 295 aa9.85□□□□□ -0.83
PTPN2-201ENST00000309660 CEBPGP53567 150 aa9.85□□□□□ -0.83
PTPN2-201ENST00000309660 OR1J1Q8NGS3 322 aa9.85□□□□□ -0.83
PTPN2-201ENST00000309660 FAM213BQ8TBF2 198 aa9.85□□□□□ -0.83
PTPN2-201ENST00000309660 BCL2L2Q92843 193 aaPredicted RBP9.85□□□□□ -0.83
PTPN2-201ENST00000309660 USB1Q9BQ65 265 aaKnown RBP9.85□□□□□ -0.83
PTPN2-201ENST00000309660 NRIP2Q9BQI9 281 aa9.85□□□□□ -0.83
PTPN2-201ENST00000309660 OBP2BQ9NPH6 170 aa9.85□□□□□ -0.83
PTPN2-201ENST00000309660 OR1A1Q9P1Q5 309 aa9.85□□□□□ -0.83
PTPN2-201ENST00000309660 ATP23Q9Y6H3 246 aa9.85□□□□□ -0.83
PTPN2-201ENST00000309660 TRAV24A0A0B4J272 114 aa9.84□□□□□ -0.83
PTPN2-201ENST00000309660 ZNF806P0C7X5 589 aa9.84□□□□□ -0.83
PTPN2-201ENST00000309660 UCP3P55916 312 aa9.84□□□□□ -0.83
PTPN2-201ENST00000309660 IL34Q6ZMJ4 242 aa9.84□□□□□ -0.83
PTPN2-201ENST00000309660 SAT2Q96F10 170 aaPredicted RBP9.84□□□□□ -0.83
PTPN2-201ENST00000309660 SMIM8Q96KF7 97 aa9.84□□□□□ -0.83
PTPN2-201ENST00000309660 DLL3Q9NYJ7 618 aa9.84□□□□□ -0.83
PTPN2-201ENST00000309660 C9JQL5 133 aa9.84□□□□□ -0.83
PTPN2-201ENST00000309660 SERPINE2P07093 398 aa9.84□□□□□ -0.83
PTPN2-201ENST00000309660 F2RL1P55085 397 aa9.84□□□□□ -0.83
PTPN2-201ENST00000309660 PPP1CBP62140 327 aa9.84□□□□□ -0.83
PTPN2-201ENST00000309660 TGFBR3Q03167 851 aa9.84□□□□□ -0.83
PTPN2-201ENST00000309660 OR2C3Q8N628 320 aa9.84□□□□□ -0.83
PTPN2-201ENST00000309660 CLRN3Q8NCR9 226 aa9.84□□□□□ -0.83
PTPN2-201ENST00000309660 C20orf24Q9BUV8 137 aa9.84□□□□□ -0.83
PTPN2-201ENST00000309660 UFSP2Q9NUQ7 469 aa9.84□□□□□ -0.83
PTPN2-201ENST00000309660 TINAGQ9UJW2 476 aa9.84□□□□□ -0.83
PTPN2-201ENST00000309660 PRELID1Q9Y255 219 aa9.84□□□□□ -0.83
PTPN2-201ENST00000309660 MPC1Q9Y5U8 109 aa9.84□□□□□ -0.83
PTPN2-201ENST00000309660 ZFHX4Q86UP3 3567 aa9.84□□□□□ -0.83
PTPN2-201ENST00000309660 MGAQ8IWI9 3026 aa9.84□□□□□ -0.83
PTPN2-201ENST00000309660 TRIM77I1YAP6 450 aa9.84□□□□□ -0.83
PTPN2-201ENST00000309660 WDR1O75083 606 aa9.84□□□□□ -0.83
PTPN2-201ENST00000309660 HOXC12P31275 282 aa9.84□□□□□ -0.83
PTPN2-201ENST00000309660 EWSR1Q01844 656 aaKnown RBP eCLIP9.84□□□□□ -0.83
PTPN2-201ENST00000309660 MRPL49Q13405 166 aaKnown RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 118.7 ms