RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 DANCRP0C864 163 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 MC5RP33032 325 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 PSMB10P40306 273 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 UCP3P55916 312 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 TCTN1Q2MV58 587 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 SLC25A26Q70HW3 274 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 OSR2Q8N2R0 312 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 BHLHE23Q8NDY6 225 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 LSM10Q969L4 123 aaKnown RBP4.32□□□□□ -1.72
CSMD3-201ENST00000297405 APIPQ96GX9 242 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 Q96M85 177 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 PLSCR3Q9NRY6 295 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 DUSP13Q9UII6 198 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 SERINC4A6NH21 518 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 OR8G3PP0DMU2 310 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 PLNP26678 52 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 ADRA1AP35348 466 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 LHX2P50458 406 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 RNF175Q8N4F7 328 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 OR52E5Q8NH55 327 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 IRF7Q92985 503 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 WBP2Q969T9 261 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 MRGPRX3Q96LB0 322 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 TAAR3PQ9P1P4 343 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 TMEM30CPA0ZSE6 113 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 IGLON5A6NGN9 336 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 LINC00587B1AMM8 73 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 SDCBPO00560 298 aaPredicted RBP4.32□□□□□ -1.72
CSMD3-201ENST00000297405 CTSVO60911 334 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 RRADP55042 308 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 NPY5RQ15761 445 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 GALNT14Q96FL9 552 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 SMOC1Q9H4F8 434 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 LOC105371267A0A1B0GV96 52 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 PRAMEF26H0Y7S4 382 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 PCMT1P22061 227 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 GPX4P36969 197 aaPredicted RBP4.32□□□□□ -1.72
CSMD3-201ENST00000297405 MPLP40238 635 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 MARCH1Q8TCQ1 289 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 SNRNP40Q96DI7 357 aaKnown RBP4.32□□□□□ -1.72
CSMD3-201ENST00000297405 DERL3Q96Q80 235 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 RTP3Q9BQQ7 232 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 SFXN3Q9BWM7 321 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 TTTY10Q9BZA0 68 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 OBP2BQ9NPH6 170 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 NTNG1Q9Y2I2 539 aa4.32□□□□□ -1.72
CSMD3-201ENST00000297405 P2RY10O00398 339 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 CD79AP11912 226 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 SELPP16109 830 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 FAHP16930 419 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 RPS11P62280 158 aaKnown RBP eCLIP4.31□□□□□ -1.72
CSMD3-201ENST00000297405 SUSD1Q6UWL2 747 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 SH2D5Q6ZV89 423 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 Q8WTZ3 238 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 WDR83Q9BRX9 315 aaKnown RBP4.31□□□□□ -1.72
CSMD3-201ENST00000297405 QTRT1Q9BXR0 403 aaKnown RBP4.31□□□□□ -1.72
CSMD3-201ENST00000297405 CRISPLD2Q9H0B8 497 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 TRAV27A0A087WT01 109 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 TISP43B9A030 160 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 SOCS6O14544 535 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 HPRT1P00492 218 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 CRYAAP02489 173 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 PPBPP02775 128 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 CD74P04233 296 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 TMEM215Q68D42 235 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 STPG3Q8N7X2 389 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 C5orf17Q8NAS9 161 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 RNASEH2CQ8TDP1 164 aaKnown RBP4.31□□□□□ -1.72
CSMD3-201ENST00000297405 AQP3Q92482 292 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 HSF5Q4G112 596 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-201ENST00000297405 GAGE13Q4V321 117 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 WNT16Q9UBV4 365 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 USP9XQ93008 2570 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-201ENST00000297405 BCAT2O15382 392 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-201ENST00000297405 DRD1P21728 446 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 MFAP2P55001 183 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 MMDQ15546 238 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 LDLRAD2Q5SZI1 272 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 SLC35E4Q6ICL7 350 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 TEPPQ6URK8 271 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 SFXN1Q9H9B4 322 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 GDE1Q9NZC3 331 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 PPP1R1AQ13522 171 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 FAM110CQ1W6H9 321 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 LAIR1Q6GTX8 287 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 TINAGQ9UJW2 476 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 TIMM10BQ9Y5J6 103 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 MRPL33O75394 65 aaKnown RBP4.31□□□□□ -1.72
CSMD3-201ENST00000297405 CTSOP43234 321 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-201ENST00000297405 WNT3P56703 355 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 RPS26P11Q5JNZ5 115 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-201ENST00000297405 CYB561D1Q8N8Q1 229 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 NMNAT3Q96T66 252 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 VSIG4Q9Y279 399 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 NPTNQ9Y639 398 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 LOC102724200A0A096LPH7 203 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-201ENST00000297405 C3orf80F5H4A9 247 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 ATXN7O15265 892 aaPredicted RBP4.31□□□□□ -1.72
CSMD3-201ENST00000297405 MMP23AO75900 390 aa4.31□□□□□ -1.72
CSMD3-201ENST00000297405 LGALS1P09382 135 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms