RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 HERPUD1Q15011 391 aa19.18■□□□□ 0.66
PTX3-201ENST00000295927 C2orf68Q2NKX9 166 aa19.18■□□□□ 0.66
PTX3-201ENST00000295927 FXYD6Q9H0Q3 95 aa19.18■□□□□ 0.66
PTX3-201ENST00000295927 SLC23A1Q9UHI7 598 aa19.18■□□□□ 0.66
PTX3-201ENST00000295927 IGHV3OR15-7A0A075B7D8 119 aa19.17■□□□□ 0.66
PTX3-201ENST00000295927 NFYAP23511 347 aaPredicted RBP19.17■□□□□ 0.66
PTX3-201ENST00000295927 VAMP1P23763 118 aa19.17■□□□□ 0.66
PTX3-201ENST00000295927 HLA-DRB3P79483 266 aa19.17■□□□□ 0.66
PTX3-201ENST00000295927 DHODHQ02127 395 aa19.17■□□□□ 0.66
PTX3-201ENST00000295927 TMEM128Q5BJH2 165 aa19.17■□□□□ 0.66
PTX3-201ENST00000295927 NOXA1Q86UR1 476 aa19.17■□□□□ 0.66
PTX3-201ENST00000295927 Q8TCH9 128 aa19.17■□□□□ 0.66
PTX3-201ENST00000295927 CACNA1BQ00975 2339 aa19.17■□□□□ 0.66
PTX3-201ENST00000295927 IGKV1D-17A0A075B6S4 117 aa19.17■□□□□ 0.66
PTX3-201ENST00000295927 TRAV39A0A0B4J263 110 aa19.17■□□□□ 0.66
PTX3-201ENST00000295927 IGKV1-6A0A0C4DH72 117 aa19.17■□□□□ 0.66
PTX3-201ENST00000295927 DEFB108AA8MXU0 73 aa19.17■□□□□ 0.66
PTX3-201ENST00000295927 BET1O15155 118 aa19.17■□□□□ 0.66
PTX3-201ENST00000295927 CLDN14O95500 239 aa19.17■□□□□ 0.66
PTX3-201ENST00000295927 MOB1BQ7L9L4 216 aa19.17■□□□□ 0.66
PTX3-201ENST00000295927 ZNF808Q8N4W9 903 aaPredicted RBP19.17■□□□□ 0.66
PTX3-201ENST00000295927 LILRB1Q8NHL6 650 aaPredicted RBP19.17■□□□□ 0.66
PTX3-201ENST00000295927 ITLN2Q8WWU7 325 aaPredicted RBP19.17■□□□□ 0.66
PTX3-201ENST00000295927 CNTNAP3BQ96NU0 1288 aa19.17■□□□□ 0.66
PTX3-201ENST00000295927 DHRS9Q9BPW9 319 aa19.17■□□□□ 0.66
PTX3-201ENST00000295927 CNTNAP3Q9BZ76 1288 aa19.17■□□□□ 0.66
PTX3-201ENST00000295927 CISD1Q9NZ45 108 aaKnown RBP19.17■□□□□ 0.66
PTX3-201ENST00000295927 TRAPPC2LQ9UL33 140 aa19.17■□□□□ 0.66
PTX3-201ENST00000295927 PPP1R3CQ9UQK1 317 aa19.17■□□□□ 0.66
PTX3-201ENST00000295927 C14orf166Q9Y224 244 aaKnown RBP19.17■□□□□ 0.66
PTX3-201ENST00000295927 C1QBP02746 253 aa19.16■□□□□ 0.66
PTX3-201ENST00000295927 CTXN2P0C2S0 81 aa19.16■□□□□ 0.66
PTX3-201ENST00000295927 TNFRSF1AP19438 455 aa19.16■□□□□ 0.66
PTX3-201ENST00000295927 AADACP22760 399 aa19.16■□□□□ 0.66
PTX3-201ENST00000295927 LOXP28300 417 aaPredicted RBP19.16■□□□□ 0.66
PTX3-201ENST00000295927 CD80P33681 288 aa19.16■□□□□ 0.66
PTX3-201ENST00000295927 OR3A1P47881 315 aa19.16■□□□□ 0.66
PTX3-201ENST00000295927 FXYD4P59646 89 aa19.16■□□□□ 0.66
PTX3-201ENST00000295927 MST1LQ2TV78 715 aa19.16■□□□□ 0.66
PTX3-201ENST00000295927 FAM201AQ5SY85 155 aa19.16■□□□□ 0.66
PTX3-201ENST00000295927 NLRC3Q7RTR2 1065 aa19.16■□□□□ 0.66
PTX3-201ENST00000295927 OR11L1Q8NGX0 322 aa19.16■□□□□ 0.66
PTX3-201ENST00000295927 TOMM40LQ969M1 308 aa19.16■□□□□ 0.66
PTX3-201ENST00000295927 SEBOXQ9HB31 216 aaPredicted RBP19.16■□□□□ 0.66
PTX3-201ENST00000295927 DLL4Q9NR61 685 aa19.16■□□□□ 0.66
PTX3-201ENST00000295927 SMG1Q96Q15 3661 aaKnown RBP19.16■□□□□ 0.66
PTX3-201ENST00000295927 CYB5R3P00387 301 aaPredicted RBP19.15■□□□□ 0.66
PTX3-201ENST00000295927 TK1P04183 234 aa19.15■□□□□ 0.66
PTX3-201ENST00000295927 CTSDP07339 412 aaPredicted RBP19.15■□□□□ 0.66
PTX3-201ENST00000295927 ZNF728P0DKX0 622 aa19.15■□□□□ 0.66
PTX3-201ENST00000295927 CD34P28906 385 aa19.15■□□□□ 0.66
PTX3-201ENST00000295927 TESK1Q15569 626 aa19.15■□□□□ 0.66
PTX3-201ENST00000295927 EFNB3Q15768 340 aa19.15■□□□□ 0.66
PTX3-201ENST00000295927 ASCC1Q8N9N2 400 aaKnown RBP19.15■□□□□ 0.66
PTX3-201ENST00000295927 OR4A4PQ8NGN8 299 aa19.15■□□□□ 0.66
PTX3-201ENST00000295927 MOB3AQ96BX8 217 aa19.15■□□□□ 0.66
PTX3-201ENST00000295927 PIK3IP1Q96FE7 263 aa19.15■□□□□ 0.66
PTX3-201ENST00000295927 CHIAQ9BZP6 476 aa19.15■□□□□ 0.66
PTX3-201ENST00000295927 TMEM30CPA0ZSE6 113 aa19.15■□□□□ 0.66
PTX3-201ENST00000295927 GOSR2O14653 212 aa19.15■□□□□ 0.66
PTX3-201ENST00000295927 AGAP20933 346 aa19.15■□□□□ 0.66
PTX3-201ENST00000295927 KCNJ3P48549 501 aa19.15■□□□□ 0.66
PTX3-201ENST00000295927 AESQ08117 197 aa19.15■□□□□ 0.66
PTX3-201ENST00000295927 FAM209AQ5JX71 171 aa19.15■□□□□ 0.66
PTX3-201ENST00000295927 SLC35E4Q6ICL7 350 aa19.15■□□□□ 0.66
PTX3-201ENST00000295927 TGIF2LYQ8IUE0 185 aa19.15■□□□□ 0.66
PTX3-201ENST00000295927 ZFAND1Q8TCF1 268 aa19.15■□□□□ 0.66
PTX3-201ENST00000295927 CASTOR1Q8WTX7 329 aa19.15■□□□□ 0.66
PTX3-201ENST00000295927 MITD1Q8WV92 249 aa19.15■□□□□ 0.66
PTX3-201ENST00000295927 SHARPINQ9H0F6 387 aa19.15■□□□□ 0.66
PTX3-201ENST00000295927 DYNLRB1Q9NP97 96 aa19.15■□□□□ 0.66
PTX3-201ENST00000295927 MBNL3Q9NUK0 354 aaKnown RBP19.15■□□□□ 0.66
PTX3-201ENST00000295927 MGAT4AQ9UM21 535 aa19.15■□□□□ 0.66
PTX3-201ENST00000295927 B9A039 149 aa19.14■□□□□ 0.65
PTX3-201ENST00000295927 SLC22A5O76082 557 aa19.14■□□□□ 0.65
PTX3-201ENST00000295927 DUS4LO95620 317 aaKnown RBP19.14■□□□□ 0.65
PTX3-201ENST00000295927 GABRA2P47869 451 aa19.14■□□□□ 0.65
PTX3-201ENST00000295927 HERV-K104P61576 105 aa19.14■□□□□ 0.65
PTX3-201ENST00000295927 COQ2Q96H96 371 aa19.14■□□□□ 0.65
PTX3-201ENST00000295927 EGLN1Q9GZT9 426 aa19.14■□□□□ 0.65
PTX3-201ENST00000295927 PIPOXQ9P0Z9 390 aa19.14■□□□□ 0.65
PTX3-201ENST00000295927 PKDREJQ9NTG1 2253 aa19.14■□□□□ 0.65
PTX3-201ENST00000295927 ZNF737O75373 536 aa19.13■□□□□ 0.65
PTX3-201ENST00000295927 SIX6O95475 246 aa19.13■□□□□ 0.65
PTX3-201ENST00000295927 PPYP01298 95 aa19.13■□□□□ 0.65
PTX3-201ENST00000295927 GZMKP49863 264 aa19.13■□□□□ 0.65
PTX3-201ENST00000295927 SUPT4H1P63272 117 aaKnown RBP19.13■□□□□ 0.65
PTX3-201ENST00000295927 ZNF672Q499Z4 452 aaPredicted RBP19.13■□□□□ 0.65
PTX3-201ENST00000295927 FAM222BQ8WU58 562 aa19.13■□□□□ 0.65
PTX3-201ENST00000295927 TMEM204Q9BSN7 226 aa19.13■□□□□ 0.65
PTX3-201ENST00000295927 KIF25Q9UIL4 384 aa19.13■□□□□ 0.65
PTX3-201ENST00000295927 PCDHB10Q9UN67 800 aa19.13■□□□□ 0.65
PTX3-201ENST00000295927 ARFGEF3Q5TH69 2177 aa19.13■□□□□ 0.65
PTX3-201ENST00000295927 DSCAMO60469 2012 aa19.13■□□□□ 0.65
PTX3-201ENST00000295927 OR2A4O95047 310 aa19.13■□□□□ 0.65
PTX3-201ENST00000295927 SFT2D2O95562 160 aa19.13■□□□□ 0.65
PTX3-201ENST00000295927 IRF2P14316 349 aa19.13■□□□□ 0.65
PTX3-201ENST00000295927 UCP3P55916 312 aa19.13■□□□□ 0.65
PTX3-201ENST00000295927 LIN54Q6MZP7 749 aa19.13■□□□□ 0.65
PTX3-201ENST00000295927 KIRREL1Q96J84 757 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms