RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 TMEM187Q14656 261 aa13.61□□□□□ -0.23
CTDSP1-201ENST00000273062 HSPB9Q9BQS6 159 aa13.61□□□□□ -0.23
CTDSP1-201ENST00000273062 TBL1XR1Q9BZK7 514 aa13.61□□□□□ -0.23
CTDSP1-201ENST00000273062 MAP1LC3BQ9GZQ8 125 aa13.61□□□□□ -0.23
CTDSP1-201ENST00000273062 MANBALQ9NQG1 85 aa13.61□□□□□ -0.23
CTDSP1-201ENST00000273062 ZNF701Q9NV72 531 aaPredicted RBP13.61□□□□□ -0.23
CTDSP1-201ENST00000273062 CISD1Q9NZ45 108 aaKnown RBP13.61□□□□□ -0.23
CTDSP1-201ENST00000273062 TP53TG3Q9ULZ0 132 aa13.61□□□□□ -0.23
CTDSP1-201ENST00000273062 LAMTOR2Q9Y2Q5 125 aa13.61□□□□□ -0.23
CTDSP1-201ENST00000273062 R4GMQ9 66 aa13.61□□□□□ -0.23
CTDSP1-201ENST00000273062 PROB1E7EW31 1015 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 OR6A2O95222 327 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 HRASP01112 189 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 ASAH2BP0C7U1 165 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 HSD11B1P28845 292 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 DYNLT3P51808 116 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 IL13RA2Q14627 380 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 LGI3Q8N145 548 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 SPACA7Q96KW9 195 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 SMIM7Q9BQ49 75 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 HDHD3Q9BSH5 251 aaPredicted RBP13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 PHF7Q9BWX1 381 aaPredicted RBP13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 Q9N2K0 584 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 PRSS50Q9UI38 385 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 TRAV39A0A0B4J263 110 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 IGHV5-51A0A0C4DH38 117 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 CEBPZOSA8MTT3 80 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 ZNF878C9JN71 531 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 NXPH3O95157 252 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 SLC35E2P0CK97 266 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 CAPZBP47756 277 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 BLKP51451 505 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 PRTGQ2VWP7 1150 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 PHLDA2Q53GA4 152 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 Q5PR19 223 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 CHRDL2Q6WN34 429 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 OR4C3Q8NH37 302 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 APH1AQ96BI3 265 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 LOXL4Q96JB6 756 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 OR5B12Q96R08 314 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 RBM7Q9Y580 266 aaKnown RBP13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 PITX3O75364 302 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 CDS2O95674 445 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 NKX2-1P43699 371 aaPredicted RBP13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 RPL23P62829 140 aaKnown RBP13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 RPL19P84098 196 aaKnown RBP13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 OCIAD2Q56VL3 154 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 OR5L1Q8NGL2 311 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 CMTM2Q8TAZ6 248 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 RPUSD4Q96CM3 377 aaKnown RBP13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 TMEM59Q9BXS4 323 aa13.6□□□□□ -0.23
CTDSP1-201ENST00000273062 PCNX3Q9H6A9 2034 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 F6UZH7 168 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 NKX2-2O95096 273 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 CSTAP01040 98 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 HLA-HP01893 362 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 HPNP05981 417 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 MYF5P13349 255 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 TCN2P20062 427 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 CD38P28907 300 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 MRPS34P82930 218 aaKnown RBP13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 ZNF726P1Q15940 193 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 BSXQ3C1V8 233 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 OGFOD3Q6PK18 319 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 TCF23Q7RTU1 214 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 OR2T10Q8NGZ9 312 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 OR52N5Q8NH56 324 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 PLPPR1Q8TBJ4 325 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 MMABQ96EY8 250 aaPredicted RBP13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 CST9LQ9H4G1 147 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 UBE2ZQ9H832 354 aaPredicted RBP13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 SOHLH2Q9NX45 425 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 MUC3AQ02505 3323 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 THADAQ6YHU6 1953 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 IGHV2OR16-5A0A0B4J2B6 119 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 A0A1W2PR77 199 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 ZNF732B4DXR9 585 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 ANOS1P23352 680 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 TAS2R46P59540 309 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 RANP62826 216 aaKnown RBP13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 Q6ZN92 141 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 MYPOPQ86VE0 399 aaPredicted RBP13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 WDFY1Q8IWB7 410 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 OR5D18Q8NGL1 313 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 WWTR1Q9GZV5 400 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 SPAG17Q6Q759 2223 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 VPS13AQ96RL7 3174 aa13.59□□□□□ -0.23
CTDSP1-201ENST00000273062 COL6A3P12111 3177 aa13.58□□□□□ -0.23
CTDSP1-201ENST00000273062 ASXL3Q9C0F0 2248 aa13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 TMEM131Q92545 1883 aa13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 MSTNO14793 375 aa13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 SSSCA1O60232 199 aa13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 CTSDP07339 412 aaPredicted RBP13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 RPL15P61313 204 aaKnown RBP13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 ZNF787Q6DD87 383 aa13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 KCTD18Q6PI47 426 aaPredicted RBP13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 ZNF738Q8NE65 137 aa13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 RBM24Q9BX46 236 aaKnown RBP13.58□□□□□ -0.24
CTDSP1-201ENST00000273062 C11orf1Q9H5F2 150 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 124.4 ms