RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 PLSCR2Q9NRY7 297 aa15.92■□□□□ 0.14
PDLIM4-201ENST00000253754 CLCF1Q9UBD9 225 aa15.92■□□□□ 0.14
PDLIM4-201ENST00000253754 ITPR1Q14643 2758 aa15.92■□□□□ 0.14
PDLIM4-201ENST00000253754 TSPAN4O14817 238 aa15.92■□□□□ 0.14
PDLIM4-201ENST00000253754 SMPD2O60906 423 aa15.92■□□□□ 0.14
PDLIM4-201ENST00000253754 TK1P04183 234 aa15.92■□□□□ 0.14
PDLIM4-201ENST00000253754 MST1LQ2TV78 715 aa15.92■□□□□ 0.14
PDLIM4-201ENST00000253754 TMEM268Q5VZI3 342 aa15.92■□□□□ 0.14
PDLIM4-201ENST00000253754 DPPA2Q7Z7J5 298 aa15.92■□□□□ 0.14
PDLIM4-201ENST00000253754 TBC1D26Q86UD7 250 aa15.92■□□□□ 0.14
PDLIM4-201ENST00000253754 FAM58AQ8N1B3 248 aa15.92■□□□□ 0.14
PDLIM4-201ENST00000253754 GAPTQ8N292 157 aa15.92■□□□□ 0.14
PDLIM4-201ENST00000253754 CCDC71LQ8N9Z2 235 aa15.92■□□□□ 0.14
PDLIM4-201ENST00000253754 PLA2G2EQ9NZK7 142 aa15.92■□□□□ 0.14
PDLIM4-201ENST00000253754 ZDHHC8Q9ULC8 765 aa15.92■□□□□ 0.14
PDLIM4-201ENST00000253754 GTF3C1Q12789 2109 aa15.92■□□□□ 0.14
PDLIM4-201ENST00000253754 PTPRQQ9UMZ3 2332 aa15.91■□□□□ 0.14
PDLIM4-201ENST00000253754 OR5B21A6NL26 309 aa15.91■□□□□ 0.14
PDLIM4-201ENST00000253754 HSD17B6O14756 317 aa15.91■□□□□ 0.14
PDLIM4-201ENST00000253754 FBXO24O75426 580 aa15.91■□□□□ 0.14
PDLIM4-201ENST00000253754 TSPAN9O75954 239 aa15.91■□□□□ 0.14
PDLIM4-201ENST00000253754 KCNJ3P48549 501 aa15.91■□□□□ 0.14
PDLIM4-201ENST00000253754 CNEP1R1Q8N9A8 125 aa15.91■□□□□ 0.14
PDLIM4-201ENST00000253754 LRRC46Q96FV0 321 aa15.91■□□□□ 0.14
PDLIM4-201ENST00000253754 USB1Q9BQ65 265 aaKnown RBP15.91■□□□□ 0.14
PDLIM4-201ENST00000253754 LPAR3Q9UBY5 353 aa15.91■□□□□ 0.14
PDLIM4-201ENST00000253754 TRDCB7Z8K6 153 aa15.91■□□□□ 0.14
PDLIM4-201ENST00000253754 SELEP16581 610 aa15.91■□□□□ 0.14
PDLIM4-201ENST00000253754 IL24Q13007 206 aa15.91■□□□□ 0.14
PDLIM4-201ENST00000253754 Q6ZS92 163 aa15.91■□□□□ 0.14
PDLIM4-201ENST00000253754 TMEM231Q9H6L2 316 aa15.91■□□□□ 0.14
PDLIM4-201ENST00000253754 TRAV39A0A0B4J263 110 aa15.9■□□□□ 0.14
PDLIM4-201ENST00000253754 MKRN2OSH3BPM6 223 aa15.9■□□□□ 0.14
PDLIM4-201ENST00000253754 UBE2NP61088 152 aaKnown RBP15.9■□□□□ 0.14
PDLIM4-201ENST00000253754 FBXW12Q6X9E4 464 aa15.9■□□□□ 0.14
PDLIM4-201ENST00000253754 LDLRAD3Q86YD5 345 aa15.9■□□□□ 0.14
PDLIM4-201ENST00000253754 OR4A4PQ8NGN8 299 aa15.9■□□□□ 0.14
PDLIM4-201ENST00000253754 WNT2BQ93097 391 aa15.9■□□□□ 0.14
PDLIM4-201ENST00000253754 HRH4Q9H3N8 390 aa15.9■□□□□ 0.14
PDLIM4-201ENST00000253754 LUZP4Q9P127 313 aa15.9■□□□□ 0.14
PDLIM4-201ENST00000253754 ATP23Q9Y6H3 246 aa15.9■□□□□ 0.14
PDLIM4-201ENST00000253754 ABCD4O14678 606 aa15.89■□□□□ 0.13
PDLIM4-201ENST00000253754 TAAR5O14804 337 aa15.89■□□□□ 0.13
PDLIM4-201ENST00000253754 TNFSF12O43508 249 aa15.89■□□□□ 0.13
PDLIM4-201ENST00000253754 PPP1CBP62140 327 aa15.89■□□□□ 0.13
PDLIM4-201ENST00000253754 RBMXL3Q8N7X1 1067 aaKnown RBP15.89■□□□□ 0.13
PDLIM4-201ENST00000253754 ZNF565Q8N9K5 539 aa15.89■□□□□ 0.13
PDLIM4-201ENST00000253754 CCL28Q9NRJ3 127 aa15.89■□□□□ 0.13
PDLIM4-201ENST00000253754 NKX2-6A6NCS4 301 aa15.89■□□□□ 0.13
PDLIM4-201ENST00000253754 ZNF44P15621 663 aa15.89■□□□□ 0.13
PDLIM4-201ENST00000253754 ADCYAP1P18509 176 aa15.89■□□□□ 0.13
PDLIM4-201ENST00000253754 LPAR6P43657 344 aa15.89■□□□□ 0.13
PDLIM4-201ENST00000253754 ESPL1Q14674 2120 aa15.89■□□□□ 0.13
PDLIM4-201ENST00000253754 FAM122CQ6P4D5 195 aa15.89■□□□□ 0.13
PDLIM4-201ENST00000253754 VWA1Q6PCB0 445 aa15.89■□□□□ 0.13
PDLIM4-201ENST00000253754 FAM214BQ7L5A3 538 aa15.89■□□□□ 0.13
PDLIM4-201ENST00000253754 CCDC36Q8IYA8 594 aa15.89■□□□□ 0.13
PDLIM4-201ENST00000253754 ARL11Q969Q4 196 aa15.89■□□□□ 0.13
PDLIM4-201ENST00000253754 TMEM222Q9H0R3 208 aa15.89■□□□□ 0.13
PDLIM4-201ENST00000253754 KIR2DS1A0A191URI9 304 aa15.88■□□□□ 0.13
PDLIM4-201ENST00000253754 RAB19A4D1S5 217 aa15.88■□□□□ 0.13
PDLIM4-201ENST00000253754 C1QTNF9BB2RNN3 333 aa15.88■□□□□ 0.13
PDLIM4-201ENST00000253754 E5RGE8 158 aa15.88■□□□□ 0.13
PDLIM4-201ENST00000253754 PRSS44E7EML9 344 aa15.88■□□□□ 0.13
PDLIM4-201ENST00000253754 AQP7O14520 342 aa15.88■□□□□ 0.13
PDLIM4-201ENST00000253754 AGFG2O95081 481 aa15.88■□□□□ 0.13
PDLIM4-201ENST00000253754 C1QTNF9P0C862 333 aa15.88■□□□□ 0.13
PDLIM4-201ENST00000253754 KIR2DS4P43632 304 aa15.88■□□□□ 0.13
PDLIM4-201ENST00000253754 KIR2DS1Q14954 304 aa15.88■□□□□ 0.13
PDLIM4-201ENST00000253754 SRSF7Q16629 238 aaKnown RBP eCLIP15.88■□□□□ 0.13
PDLIM4-201ENST00000253754 SLC25A40Q8TBP6 338 aa15.88■□□□□ 0.13
PDLIM4-201ENST00000253754 ABHD17AQ96GS6 310 aa15.88■□□□□ 0.13
PDLIM4-201ENST00000253754 PLK3Q9H4B4 646 aa15.88■□□□□ 0.13
PDLIM4-201ENST00000253754 CDH20Q9HBT6 801 aa15.88■□□□□ 0.13
PDLIM4-201ENST00000253754 WFDC1Q9HC57 220 aa15.88■□□□□ 0.13
PDLIM4-201ENST00000253754 RCL1Q9Y2P8 373 aaKnown RBP15.88■□□□□ 0.13
PDLIM4-201ENST00000253754 RAXQ9Y2V3 346 aa15.88■□□□□ 0.13
PDLIM4-201ENST00000253754 NSG2Q9Y328 171 aa15.88■□□□□ 0.13
PDLIM4-201ENST00000253754 UBE2J1Q9Y385 318 aaPredicted RBP15.88■□□□□ 0.13
PDLIM4-201ENST00000253754 J3QT63 122 aa15.88■□□□□ 0.13
PDLIM4-201ENST00000253754 MED6O75586 246 aa15.88■□□□□ 0.13
PDLIM4-201ENST00000253754 TUSC2O75896 110 aa15.88■□□□□ 0.13
PDLIM4-201ENST00000253754 HOXA4Q00056 320 aaPredicted RBP15.88■□□□□ 0.13
PDLIM4-201ENST00000253754 PCSK4Q6UW60 755 aa15.88■□□□□ 0.13
PDLIM4-201ENST00000253754 C9orf106Q8NAJ2 232 aa15.88■□□□□ 0.13
PDLIM4-201ENST00000253754 PKIBQ9C010 78 aa15.88■□□□□ 0.13
PDLIM4-201ENST00000253754 PARP12Q9H0J9 701 aaKnown RBP15.88■□□□□ 0.13
PDLIM4-201ENST00000253754 ACACBO00763 2458 aa15.87■□□□□ 0.13
PDLIM4-201ENST00000253754 RP1L1Q8IWN7 2480 aaPredicted RBP15.87■□□□□ 0.13
PDLIM4-201ENST00000253754 TMEM218A2RU14 115 aa15.87■□□□□ 0.13
PDLIM4-201ENST00000253754 SIRPB1O00241 398 aa15.87■□□□□ 0.13
PDLIM4-201ENST00000253754 GPR31O00270 319 aa15.87■□□□□ 0.13
PDLIM4-201ENST00000253754 TGFBR3Q03167 851 aa15.87■□□□□ 0.13
PDLIM4-201ENST00000253754 GABRA6Q16445 453 aa15.87■□□□□ 0.13
PDLIM4-201ENST00000253754 UQCC3Q6UW78 93 aa15.87■□□□□ 0.13
PDLIM4-201ENST00000253754 SCCPDHQ8NBX0 429 aa15.87■□□□□ 0.13
PDLIM4-201ENST00000253754 OR4D5Q8NGN0 318 aa15.87■□□□□ 0.13
PDLIM4-201ENST00000253754 LILRB1Q8NHL6 650 aaPredicted RBP15.87■□□□□ 0.13
PDLIM4-201ENST00000253754 SARAFQ96BY9 339 aa15.87■□□□□ 0.13
PDLIM4-201ENST00000253754 SPACA1Q9HBV2 294 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms