RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 TBC1D28Q2M2D7 210 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 FAM78BQ5VT40 261 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 GCNT2Q8N0V5 402 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 OR1K1Q8NGR3 316 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 CFHR5Q9BXR6 569 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 A0A1B0GTI1 187 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 SPINK4O60575 86 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 NGFP01138 241 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 ADAMTS17Q8TE56 1095 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 ABHD3Q8WU67 409 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 MESP1Q9BRJ9 268 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 ACACBO00763 2458 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 TRBV23-1A0A0A0MS06 115 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 IGHV3-13P01766 116 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 IGHV3-7P01780 117 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 HKR1P10072 659 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 COL19A1Q14993 1142 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 MYOZ1Q9NP98 299 aaPredicted RBP4.02□□□□□ -1.77
VPS13C-201ENST00000249837 SMIM6P0DI80 62 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 GNG3P63215 75 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 TMEM211Q6ICI0 200 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 CXorf67Q86X51 503 aaPredicted RBP4.02□□□□□ -1.77
VPS13C-201ENST00000249837 ZNF573Q86YE8 665 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 PRSS50Q9UI38 385 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 A0A087X0M5 115 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 A0A1B0GX30 115 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 MAP1LC3B2A6NCE7 125 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 ZNF737O75373 536 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 SCTP09683 121 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 IFI6P09912 130 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 MAP1LC3BQ9GZQ8 125 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 HIPK2Q9H2X6 1198 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 IGHV5-10-1A0A0J9YXX1 117 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 ZNF880Q6PDB4 577 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 FOXB1Q99853 325 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 RARRES2Q99969 163 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 Q9N2K0 584 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 LIN7CQ9NUP9 197 aaKnown RBP4.02□□□□□ -1.77
VPS13C-201ENST00000249837 CACFD1Q9UGQ2 172 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 FABP6P51161 128 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 FNDC7Q5VTL7 733 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 LINC00114Q6XXX2 140 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 TAAR6Q96RI8 345 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 RSG1Q9BU20 258 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 V9GYS6 101 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 CD74P04233 296 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 ACKR3P25106 362 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 CDCP2Q5VXM1 449 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 SPINK14Q6IE38 97 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 DHRS11Q6UWP2 260 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 CADM4Q8NFZ8 388 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 ABHD14AQ9BUJ0 271 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 KMT2EQ8IZD2 1858 aa4.02□□□□□ -1.77
VPS13C-201ENST00000249837 ZNF106Q9H2Y7 1883 aaKnown RBP4.02□□□□□ -1.77
VPS13C-201ENST00000249837 DEFB108AA8MXU0 73 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 M0R1X1 148 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 ISG15P05161 165 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 FBP1P09467 338 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 LIFP15018 202 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 RNF144BQ7Z419 303 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 GPR146Q96CH1 333 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 ZDHHC11Q9H8X9 412 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 CD63P08962 238 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 IGFBP3P17936 291 aaPredicted RBP4.01□□□□□ -1.77
VPS13C-201ENST00000249837 PLAURQ03405 335 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 RHBDD2Q6NTF9 364 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 FGF11Q92914 225 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 TIAF1O95411 115 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 ZNF439Q8NDP4 499 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 NEIL1Q96FI4 390 aaPredicted RBP4.01□□□□□ -1.77
VPS13C-201ENST00000249837 MSL2Q9HCI7 577 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 C17orf112F2Z3M2 114 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 H0YL77 283 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 FCGR3AP08637 254 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 ZNF735P0CB33 412 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 TNFSF4P23510 183 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 SNCAP37840 140 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 OR3A1P47881 315 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 GABRA4P48169 554 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 HLA-DRB3P79483 266 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 SURF2Q15527 256 aaPredicted RBP4.01□□□□□ -1.77
VPS13C-201ENST00000249837 OR52M1Q8NGK5 317 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 BTF3L4Q96K17 158 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 SLC7A10Q9NS82 523 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 IGHV3-43A0A0B4J1X8 118 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 SLC22A20A6NK97 555 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 DEDDO75618 318 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 CD8AP01732 235 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 IGHV3-43DP0DP04 118 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 ZNF574Q6ZN55 896 aaPredicted RBP4.01□□□□□ -1.77
VPS13C-201ENST00000249837 SELENOHQ8IZQ5 122 aaKnown RBP4.01□□□□□ -1.77
VPS13C-201ENST00000249837 IL22RA2Q969J5 263 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 HIST1H2BAQ96A08 127 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 SLX1AQ9BQ83 275 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 TMEM30CPA0ZSE6 113 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 LRP5LA4QPB2 252 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 TMEM14DPA8MWL7 114 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 TRAF3IP2O43734 574 aaPredicted RBP4.01□□□□□ -1.77
VPS13C-201ENST00000249837 PGA4P0DJD7 388 aa4.01□□□□□ -1.77
VPS13C-201ENST00000249837 DHRS7BQ6IAN0 325 aaPredicted RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms