RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 GNMTQ14749 295 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 HPSE2Q8WWQ2 592 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 OR6C1Q96RD1 312 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 RASL10BQ96S79 203 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 PRO3102Q9H379 93 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 SLC2A9Q9NRM0 540 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 TP53I11O14683 189 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 SCRG1O75711 98 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 TIAF1O95411 115 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 CRYABP02511 175 aaKnown RBP7.55□□□□□ -1.2
VCL-207ENST00000624354 RGS19P49795 217 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 CNN3Q15417 329 aaKnown RBP7.55□□□□□ -1.2
VCL-207ENST00000624354 SNAI3Q3KNW1 292 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 PHYHD1Q5SRE7 291 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 FADS6Q8N9I5 356 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 OR5L1Q8NGL2 311 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 TMEM54Q969K7 222 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 ZNF385AQ96PM9 386 aaKnown RBP7.55□□□□□ -1.2
VCL-207ENST00000624354 PCED1AQ9H1Q7 454 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 SH3BGRL3Q9H299 93 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 C19orf25Q9UFG5 118 aaPredicted RBP7.55□□□□□ -1.2
VCL-207ENST00000624354 PITPNC1Q9UKF7 332 aa7.55□□□□□ -1.2
VCL-207ENST00000624354 SVILO95425 2214 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 MSTNO14793 375 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 VAMP5O95183 116 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 HIST1H3AP68431 136 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 DLK1P80370 383 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 H3F3AP84243 136 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 COTL1Q14019 142 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 RSPO4Q2I0M5 234 aaPredicted RBP7.54□□□□□ -1.2
VCL-207ENST00000624354 HIKESHIQ53FT3 197 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 TMEM182Q6ZP80 229 aaPredicted RBP7.54□□□□□ -1.2
VCL-207ENST00000624354 SLC25A45Q8N413 288 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 PRR18Q8N4B5 295 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 OR52M1Q8NGK5 317 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 FAM213BQ8TBF2 198 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 NABP1Q96AH0 204 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 BORCS8Q96FH0 119 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 REEP6Q96HR9 211 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 C18orf12Q96KH6 178 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 FAM210BQ96KR6 192 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 SNX22Q96L94 193 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 RARRES2Q99969 163 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 TMEM208Q9BTX3 173 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 ANGPTL4Q9BY76 406 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 ULBP2Q9BZM5 246 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 ACTR3CQ9C0K3 210 aaPredicted RBP7.54□□□□□ -1.2
VCL-207ENST00000624354 SMDT1Q9H4I9 107 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 FER1L5A0AVI2 2057 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 CFAP47Q6ZTR5 3102 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 MED19A0JLT2 244 aaPredicted RBP7.54□□□□□ -1.2
VCL-207ENST00000624354 PHF1O43189 567 aaPredicted RBP7.54□□□□□ -1.2
VCL-207ENST00000624354 DFFBO76075 338 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 PPP1CCP36873 323 aaKnown RBP7.54□□□□□ -1.2
VCL-207ENST00000624354 FOXL2NBQ6ZUU3 175 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 CCDC71LQ8N9Z2 235 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 OR2AE1Q8NHA4 323 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 MSI2Q96DH6 328 aaKnown RBP7.54□□□□□ -1.2
VCL-207ENST00000624354 GPR87Q9BY21 358 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 ZNF286AQ9HBT8 521 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 RCL1Q9Y2P8 373 aaKnown RBP7.54□□□□□ -1.2
VCL-207ENST00000624354 RALGAPA1Q6GYQ0 2036 aa7.54□□□□□ -1.2
VCL-207ENST00000624354 IGHV3-15A0A0B4J1V0 119 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 A0A1B0GW64 132 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 FAM221AA4D161 298 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 TOX3O15405 576 aaPredicted RBP7.53□□□□□ -1.2
VCL-207ENST00000624354 TGOLN2O43493 480 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 GNG10P50151 68 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 C20orf196Q8IYI0 205 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 MAML2Q8IZL2 1156 aaPredicted RBP7.53□□□□□ -1.2
VCL-207ENST00000624354 RNASEH2CQ8TDP1 164 aaKnown RBP7.53□□□□□ -1.2
VCL-207ENST00000624354 WNT5BQ9H1J7 359 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 IL17BQ9UHF5 180 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 RARRES3Q9UL19 164 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 BOD1L1Q8NFC6 3051 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 PGA5P0DJD9 388 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 GLIPR1P48060 266 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 TDGF1P3P51864 188 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 HERV-K104P61576 105 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 ZNF266Q14584 549 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 RAET1LQ5VY80 246 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 BRICD5Q6PL45 260 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 ZNF429Q86V71 674 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 TVP23CQ96ET8 276 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 ZNF581Q9P0T4 197 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 CHCHD2Q9Y6H1 151 aaPredicted RBP7.53□□□□□ -1.2
VCL-207ENST00000624354 H0YL77 283 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 GEMIN2O14893 280 aaKnown RBP7.53□□□□□ -1.2
VCL-207ENST00000624354 NPSP0C0P6 89 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 METTL15P1P0C7V9 234 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 LINC00614P0C842 121 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 UCP3P55916 312 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 EWSR1Q01844 656 aaKnown RBP eCLIP7.53□□□□□ -1.2
VCL-207ENST00000624354 FAM27BQ5VT28 67 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 MEX3BQ6ZN04 569 aaKnown RBP7.53□□□□□ -1.2
VCL-207ENST00000624354 LHFPL2Q6ZUX7 228 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 THNSL2Q86YJ6 484 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 TMEM183AQ8IXX5 376 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 C1orf87Q8N0U7 546 aa7.53□□□□□ -1.2
VCL-207ENST00000624354 TMEM123Q8N131 208 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms