RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 DUX4L9Q6RFH8 374 aaPredicted RBP6.4□□□□□ -1.38
CLK1-215ENST00000621181 LYPD4Q6UWN0 246 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 ZNF782Q6ZMW2 699 aaPredicted RBP6.4□□□□□ -1.38
CLK1-215ENST00000621181 ZNF767PQ75MW2 155 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 KLHDC1Q8N7A1 406 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 FAM216BQ8N7L0 139 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 LY6G5BQ8NDX9 201 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 OR11H4Q8NGC9 324 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 OR56B2PQ8NGI1 322 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 OR51L1Q8NGJ5 315 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 OR4C13Q8NGP0 309 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 LRRC29Q8WV35 223 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 H1FXQ92522 213 aaKnown RBP6.4□□□□□ -1.38
CLK1-215ENST00000621181 OR14A2Q96R54 314 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 OR51J1Q9H342 316 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 PNRC2Q9NPJ4 139 aaKnown RBP6.4□□□□□ -1.38
CLK1-215ENST00000621181 NUDT15Q9NV35 164 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 RABL2AQ9UBK7 228 aaPredicted RBP6.4□□□□□ -1.38
CLK1-215ENST00000621181 DUX4Q9UBX2 424 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 CYB5R1Q9UHQ9 305 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 ELF5Q9UKW6 265 aaPredicted RBP6.4□□□□□ -1.38
CLK1-215ENST00000621181 RABL2BQ9UNT1 228 aa6.4□□□□□ -1.38
CLK1-215ENST00000621181 MEIKINA0A087WXM9 373 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 A0A1W2PPK0 400 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 AIPO00170 330 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 ZNF593O00488 134 aaPredicted RBP6.39□□□□□ -1.39
CLK1-215ENST00000621181 NDUFB3O43676 98 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 GLCEO94923 617 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 VSIG10L2P0DP72 767 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 ZNF823P16415 610 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 CXCL3P19876 107 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 NAA10P41227 235 aaPredicted RBP6.39□□□□□ -1.39
CLK1-215ENST00000621181 HTR2BP41595 481 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 EFNB2P52799 333 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 PITPNAQ00169 270 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 UBE2NLQ5JXB2 153 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 GLYATL3Q5SZD4 288 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 NCR3LG1Q68D85 454 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 PNKDQ8N490 385 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 PPP1R35Q8TAP8 253 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 LGALS14Q8TCE9 139 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 SNAPC3Q92966 411 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 DERL3Q96Q80 235 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 SSX3Q99909 188 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 PDCD1LG2Q9BQ51 273 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 FAM234AQ9H0X4 552 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 NECAP2Q9NVZ3 263 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 COPZ2Q9P299 210 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 SLC23A1Q9UHI7 598 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 KLHDC2Q9Y2U9 406 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 AK6Q9Y3D8 172 aaKnown RBP6.39□□□□□ -1.39
CLK1-215ENST00000621181 HSPB11Q9Y547 144 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 TRAV6A0A075B6T7 132 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 TRBV2A0A0J9YWF9 115 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 TRBV5-5A0A0J9YX44 114 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 IFITM5A6NNB3 132 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 ANKRD30BLA7E2S9 258 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 ZFPL1O95159 310 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 DHFRP00374 187 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 SRMP19623 302 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 RPS27P42677 84 aaKnown RBP6.39□□□□□ -1.39
CLK1-215ENST00000621181 CCR6P51684 374 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 UBE2E1P51965 193 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 ZP1P60852 638 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 LY6EQ16553 131 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 NSUN5P1Q3KNT7 163 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 VAX1Q5SQQ9 334 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 DRAM2Q6UX65 266 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 DPY19L4Q7Z388 723 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 TIGD4Q8IY51 512 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 LYG1Q8N1E2 194 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 Q8N7P7 452 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 BEND2Q8NDZ0 799 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 OR4S1Q8NGB4 309 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 OR5T2Q8NGG2 359 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 CFHR4Q92496 578 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 DCTN5Q9BTE1 182 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 TTTY10Q9BZA0 68 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 MED28Q9H204 178 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 OPA3Q9H6K4 179 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 METTL8Q9H825 291 aaKnown RBP6.39□□□□□ -1.39
CLK1-215ENST00000621181 RAB18Q9NP72 206 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 BRD7Q9NPI1 651 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 MRM2Q9UI43 246 aaKnown RBP6.39□□□□□ -1.39
CLK1-215ENST00000621181 GNG8Q9UK08 70 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 MAB21L2Q9Y586 359 aa6.39□□□□□ -1.39
CLK1-215ENST00000621181 TRBV5-7A0A0A0MS05 114 aa6.38□□□□□ -1.39
CLK1-215ENST00000621181 A6NJY4 79 aa6.38□□□□□ -1.39
CLK1-215ENST00000621181 TPPPO94811 219 aa6.38□□□□□ -1.39
CLK1-215ENST00000621181 H2AFB2P0C5Z0 115 aa6.38□□□□□ -1.39
CLK1-215ENST00000621181 SLC2A1P11166 492 aa6.38□□□□□ -1.39
CLK1-215ENST00000621181 SELLP14151 372 aa6.38□□□□□ -1.39
CLK1-215ENST00000621181 ANOS1P23352 680 aa6.38□□□□□ -1.39
CLK1-215ENST00000621181 OTX1P32242 354 aaPredicted RBP6.38□□□□□ -1.39
CLK1-215ENST00000621181 GDNFP39905 211 aa6.38□□□□□ -1.39
CLK1-215ENST00000621181 KIR2DS4P43632 304 aa6.38□□□□□ -1.39
CLK1-215ENST00000621181 CCR9P51686 369 aa6.38□□□□□ -1.39
CLK1-215ENST00000621181 GMFBP60983 142 aa6.38□□□□□ -1.39
CLK1-215ENST00000621181 MRPL28Q13084 256 aaKnown RBP6.38□□□□□ -1.39
CLK1-215ENST00000621181 TAF13Q15543 124 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 172 ms