RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 ATP6V1B2P21281 511 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 GGT2P36268 569 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 RIDAP52758 137 aaKnown RBP2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 SLC25A1P53007 311 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 KRTAP10-3P60369 221 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 TNFAIP6P98066 277 aaPredicted RBP2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 SCGB2A2Q13296 93 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 MICAQ29983 383 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 ALKBH6Q3KRA9 238 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 TMEM155Q4W5P6 130 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 SLC25A30Q5SVS4 291 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 SPATA46Q5T0L3 261 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 C9orf66Q5T8R8 295 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 LIPNQ5VXI9 398 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 ACSM5Q6NUN0 579 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 LEG1Q6P5S2 330 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 DRAM2Q6UX65 266 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 Q6ZR03 302 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 TRPM8Q7Z2W7 1104 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 LRRC28Q86X40 367 aaPredicted RBP2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 DHFR2Q86XF0 187 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR8H3Q8N146 312 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 CSNK1G2-AS1Q8NCQ2 148 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 ICA1LQ8NDH6 482 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR2T33Q8NG76 320 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR8G5Q8NG78 346 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR52L1Q8NGH7 329 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR52E2Q8NGJ4 325 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR13G1Q8NGZ3 307 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR2T4Q8NH00 348 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR4K13Q8NH42 304 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR51F2Q8NH61 342 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 CMBLQ96DG6 245 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 TIMD4Q96H15 378 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 SLC30A2Q9BRI3 323 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 PLA2G12AQ9BZM1 189 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 NMNAT2Q9BZQ4 307 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 SLC22A4Q9H015 551 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR51B6Q9H340 312 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 ZNF665Q9H7R5 613 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 SRD5A3Q9H8P0 318 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 MOB1AQ9H8S9 216 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 REEP1Q9H902 201 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 MARCH7Q9H992 704 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 RPRD1BQ9NQG5 326 aaKnown RBP2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 TMEM106BQ9NUM4 274 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 MRPL22Q9NWU5 206 aaKnown RBP2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 UBQLN2Q9UHD9 624 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 IL20RAQ9UHF4 553 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 NOP16Q9Y3C1 178 aaKnown RBP2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 NPTNQ9Y639 398 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 AUP1Q9Y679 476 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 V9GYQ6 96 aa2.79□□□□□ -1.96
CKS1BP3-201ENST00000600888 A0A0G2JMP0 313 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 A0A0X1KG70 313 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 TCRBV3S1A0A5B6 114 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 RPL37AP8A6NKH3 93 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 RNF212BA8MTL3 300 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 ZNF878C9JN71 531 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 M0R135 149 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 XRCC2O43543 280 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 TCF21O43680 179 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 CLN5O75503 358 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 FOXH1O75593 365 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 PNPP00491 289 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 CST1P01037 141 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 IFNGP01579 166 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 APOC1P02654 83 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 WNT2P09544 360 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 PPIAL4GP0DN37 164 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 ZNF823P16415 610 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 ZNF3P17036 446 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 BCL3P20749 454 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 FMO3P31513 532 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 DDOSTP39656 456 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 MDH2P40926 338 aaKnown RBP2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 CD200P41217 278 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 SRP9P49458 86 aaKnown RBP2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 CDK5Q00535 292 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 GPR50Q13585 617 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 CRMP1Q14194 572 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 GK2Q14410 553 aaPredicted RBP2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 MEP1BQ16820 701 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 C15orf32Q32M92 178 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 DNAL1Q4LDG9 190 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 SPRNQ5BIV9 151 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 LINC01590Q5TEZ4 76 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 SPICQ8N5J4 248 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 SPERTQ8NA61 448 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 SDR9C7Q8NEX9 313 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR4M2Q8NGB6 313 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR8D4Q8NGM9 314 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 OR4Q3Q8NH05 313 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 ST7LQ8TDW4 575 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 GIPC3Q8TF64 312 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 CANT1Q8WVQ1 401 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 ITLN1Q8WWA0 313 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 DNAJC9Q8WXX5 260 aa2.78□□□□□ -1.96
CKS1BP3-201ENST00000600888 SLC7A6Q92536 515 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms