RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, human

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLN6-208	ENST00000567060	SELL	P14151	372 aa		13.8	□□□□□ -0.2
CLN6-208	ENST00000567060	RPS19	P39019	145 aa	Known RBP	13.8	□□□□□ -0.2
CLN6-208	ENST00000567060	OR3A1	P47881	315 aa		13.8	□□□□□ -0.2
CLN6-208	ENST00000567060	SERPINB10	P48595	397 aa		13.8	□□□□□ -0.2
CLN6-208	ENST00000567060	VBP1	P61758	197 aa		13.8	□□□□□ -0.2
CLN6-208	ENST00000567060	NCS1	P62166	190 aa		13.8	□□□□□ -0.2
CLN6-208	ENST00000567060	LSM3	P62310	102 aa	Known RBP	13.8	□□□□□ -0.2
CLN6-208	ENST00000567060	RPL31	P62899	125 aa	Known RBP	13.8	□□□□□ -0.2
CLN6-208	ENST00000567060	PAX8	Q06710	450 aa		13.8	□□□□□ -0.2
CLN6-208	ENST00000567060	SCN1B	Q07699	218 aa		13.8	□□□□□ -0.2
CLN6-208	ENST00000567060	ARL6IP1	Q15041	203 aa		13.8	□□□□□ -0.2
CLN6-208	ENST00000567060	CMTM4	Q8IZR5	234 aa		13.8	□□□□□ -0.2
CLN6-208	ENST00000567060	OR56B1	Q8NGI3	324 aa		13.8	□□□□□ -0.2
CLN6-208	ENST00000567060	H1FX	Q92522	213 aa	Known RBP	13.8	□□□□□ -0.2
CLN6-208	ENST00000567060	FAM46B	Q96A09	425 aa		13.8	□□□□□ -0.2
CLN6-208	ENST00000567060	NEDD4L	Q96PU5	975 aa		13.8	□□□□□ -0.2
CLN6-208	ENST00000567060	DPCD	Q9BVM2	203 aa	Predicted RBP	13.8	□□□□□ -0.2
CLN6-208	ENST00000567060	LPAR2	Q9HBW0	351 aa		13.8	□□□□□ -0.2
CLN6-208	ENST00000567060	NDUFA13	Q9P0J0	144 aa		13.8	□□□□□ -0.2
CLN6-208	ENST00000567060	DAPK2	Q9UIK4	370 aa		13.8	□□□□□ -0.2
CLN6-208	ENST00000567060	TMEM272	A0A1B0GTI8	110 aa		13.79	□□□□□ -0.2
CLN6-208	ENST00000567060	hCG_1809904	A0A1W2PP81	198 aa		13.79	□□□□□ -0.2
CLN6-208	ENST00000567060		A0A1W2PPE2	198 aa		13.79	□□□□□ -0.2
CLN6-208	ENST00000567060		A0A1W2PR64	198 aa		13.79	□□□□□ -0.2
CLN6-208	ENST00000567060		A0A1W2PRV1	198 aa		13.79	□□□□□ -0.2
CLN6-208	ENST00000567060	hADV38S2	A0JD32	116 aa		13.79	□□□□□ -0.2
CLN6-208	ENST00000567060	POM121C	A8CG34	1229 aa		13.79	□□□□□ -0.2
CLN6-208	ENST00000567060	MCRIP1	C9JLW8	97 aa		13.79	□□□□□ -0.2
CLN6-208	ENST00000567060		M0R1W7	72 aa		13.79	□□□□□ -0.2
CLN6-208	ENST00000567060	PDCD6	O75340	191 aa		13.79	□□□□□ -0.2
CLN6-208	ENST00000567060	RBP4	P02753	201 aa		13.79	□□□□□ -0.2
CLN6-208	ENST00000567060	HNF1A	P20823	631 aa		13.79	□□□□□ -0.2
CLN6-208	ENST00000567060	RORC	P51449	518 aa		13.79	□□□□□ -0.2
CLN6-208	ENST00000567060	P2RX3	P56373	397 aa		13.79	□□□□□ -0.2
CLN6-208	ENST00000567060	CLDN12	P56749	244 aa		13.79	□□□□□ -0.2
CLN6-208	ENST00000567060	BLMH	Q13867	455 aa		13.79	□□□□□ -0.2
CLN6-208	ENST00000567060	SUMF2	Q8NBJ7	301 aa		13.79	□□□□□ -0.2
CLN6-208	ENST00000567060	OR4S1	Q8NGB4	309 aa		13.79	□□□□□ -0.2
CLN6-208	ENST00000567060	ACOT12	Q8WYK0	555 aa		13.79	□□□□□ -0.2
CLN6-208	ENST00000567060	AP3S1	Q92572	193 aa		13.79	□□□□□ -0.2
CLN6-208	ENST00000567060	LPAR5	Q9H1C0	372 aa		13.79	□□□□□ -0.2
CLN6-208	ENST00000567060	DCSTAMP	Q9H295	470 aa		13.79	□□□□□ -0.2
CLN6-208	ENST00000567060	HSF4	Q9ULV5	492 aa		13.79	□□□□□ -0.2
CLN6-208	ENST00000567060	LINC00312	Q9Y6C7	94 aa		13.79	□□□□□ -0.2
CLN6-208	ENST00000567060	TENM1	Q9UKZ4	2725 aa		13.79	□□□□□ -0.2
CLN6-208	ENST00000567060	TFF1	P04155	84 aa		13.78	□□□□□ -0.2
CLN6-208	ENST00000567060	ATAD3C	Q5T2N8	411 aa		13.78	□□□□□ -0.2
CLN6-208	ENST00000567060	IDNK	Q5T6J7	187 aa		13.78	□□□□□ -0.2
CLN6-208	ENST00000567060	SLC35E4	Q6ICL7	350 aa		13.78	□□□□□ -0.2
CLN6-208	ENST00000567060	RAB12	Q6IQ22	244 aa		13.78	□□□□□ -0.2
CLN6-208	ENST00000567060	IL17REL	Q6ZVW7	336 aa		13.78	□□□□□ -0.2
CLN6-208	ENST00000567060	CORO2A	Q92828	525 aa		13.78	□□□□□ -0.2
CLN6-208	ENST00000567060	CMTM3	Q96MX0	182 aa		13.78	□□□□□ -0.2
CLN6-208	ENST00000567060	NAA50	Q9GZZ1	169 aa	Known RBP	13.78	□□□□□ -0.2
CLN6-208	ENST00000567060	PPA2	Q9H2U2	334 aa		13.78	□□□□□ -0.2
CLN6-208	ENST00000567060	MMP26	Q9NRE1	261 aa		13.78	□□□□□ -0.2
CLN6-208	ENST00000567060	OR6C3	Q9NZP0	311 aa		13.78	□□□□□ -0.2
CLN6-208	ENST00000567060	SPATA2	Q9UM82	520 aa		13.78	□□□□□ -0.2
CLN6-208	ENST00000567060	UBE2J1	Q9Y385	318 aa	Predicted RBP	13.78	□□□□□ -0.2
CLN6-208	ENST00000567060	AUP1	Q9Y679	476 aa		13.78	□□□□□ -0.2
CLN6-208	ENST00000567060	DSCAML1	Q8TD84	2053 aa		13.78	□□□□□ -0.2
CLN6-208	ENST00000567060		A0A0A6YYH2	397 aa		13.77	□□□□□ -0.21
CLN6-208	ENST00000567060	SMIM31	A0A1B0GVY4	71 aa		13.77	□□□□□ -0.21
CLN6-208	ENST00000567060		A0A1W2PQ09	198 aa		13.77	□□□□□ -0.21
CLN6-208	ENST00000567060		A6NJ64	397 aa		13.77	□□□□□ -0.21
CLN6-208	ENST00000567060	ARHGAP32	A7KAX9	2087 aa		13.77	□□□□□ -0.21
CLN6-208	ENST00000567060	CLEC2L	P0C7M8	214 aa		13.77	□□□□□ -0.21
CLN6-208	ENST00000567060	SLC2A2	P11168	524 aa	Predicted RBP	13.77	□□□□□ -0.21
CLN6-208	ENST00000567060	SRD5A1	P18405	259 aa		13.77	□□□□□ -0.21
CLN6-208	ENST00000567060	CHAT	P28329	748 aa		13.77	□□□□□ -0.21
CLN6-208	ENST00000567060	EDDM3B	P56851	147 aa		13.77	□□□□□ -0.21
CLN6-208	ENST00000567060	KRBOX4	Q5JUW0	171 aa		13.77	□□□□□ -0.21
CLN6-208	ENST00000567060	METTL11B	Q5VVY1	283 aa		13.77	□□□□□ -0.21
CLN6-208	ENST00000567060	OR10K2	Q6IF99	312 aa		13.77	□□□□□ -0.21
CLN6-208	ENST00000567060	FAHD2B	Q6P2I3	314 aa	Predicted RBP	13.77	□□□□□ -0.21
CLN6-208	ENST00000567060	FAHD2A	Q96GK7	314 aa		13.77	□□□□□ -0.21
CLN6-208	ENST00000567060	TMPRSS13	Q9BYE2	586 aa		13.77	□□□□□ -0.21
CLN6-208	ENST00000567060	CHST6	Q9GZX3	395 aa		13.77	□□□□□ -0.21
CLN6-208	ENST00000567060	C7orf69	Q9H7B7	122 aa		13.77	□□□□□ -0.21
CLN6-208	ENST00000567060	UNKL	Q9H9P5	680 aa	Known RBP	13.77	□□□□□ -0.21
CLN6-208	ENST00000567060	RAB9B	Q9NP90	201 aa		13.77	□□□□□ -0.21
CLN6-208	ENST00000567060	TAS2R3	Q9NYW6	316 aa		13.77	□□□□□ -0.21
CLN6-208	ENST00000567060	PEX16	Q9Y5Y5	336 aa		13.77	□□□□□ -0.21
CLN6-208	ENST00000567060	TRGV10	A0A0A0MS01	117 aa		13.76	□□□□□ -0.21
CLN6-208	ENST00000567060	ODAM	A1E959	279 aa		13.76	□□□□□ -0.21
CLN6-208	ENST00000567060	BLVRB	P30043	206 aa	Predicted RBP	13.76	□□□□□ -0.21
CLN6-208	ENST00000567060	SOX6	P35712	828 aa		13.76	□□□□□ -0.21
CLN6-208	ENST00000567060	BPIFB3	P59826	476 aa		13.76	□□□□□ -0.21
CLN6-208	ENST00000567060	SCGB2A2	Q13296	93 aa		13.76	□□□□□ -0.21
CLN6-208	ENST00000567060	CR1L	Q2VPA4	569 aa		13.76	□□□□□ -0.21
CLN6-208	ENST00000567060	SIGIRR	Q6IA17	410 aa		13.76	□□□□□ -0.21
CLN6-208	ENST00000567060	FAM185A	Q8N0U4	392 aa		13.76	□□□□□ -0.21
CLN6-208	ENST00000567060	GAPT	Q8N292	157 aa		13.76	□□□□□ -0.21
CLN6-208	ENST00000567060	ZNF565	Q8N9K5	539 aa		13.76	□□□□□ -0.21
CLN6-208	ENST00000567060	NEK7	Q8TDX7	302 aa		13.76	□□□□□ -0.21
CLN6-208	ENST00000567060	UPRT	Q96BW1	309 aa		13.76	□□□□□ -0.21
CLN6-208	ENST00000567060	ISOC1	Q96CN7	298 aa		13.76	□□□□□ -0.21
CLN6-208	ENST00000567060	RIMS4	Q9H426	269 aa	Predicted RBP	13.76	□□□□□ -0.21
CLN6-208	ENST00000567060	PLEKHJ1	Q9NW61	149 aa		13.76	□□□□□ -0.21
CLN6-208	ENST00000567060	CEPT1	Q9Y6K0	416 aa		13.76	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 70 ms