RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 PRAMEF5Q5TYX0 476 aa13□□□□□ -0.33
DDX55-212ENST00000544738 TMPRSS11AQ6ZMR5 421 aa13□□□□□ -0.33
DDX55-212ENST00000544738 OR4F17Q8NGA8 305 aa13□□□□□ -0.33
DDX55-212ENST00000544738 GPR148Q8TDV2 347 aa13□□□□□ -0.33
DDX55-212ENST00000544738 APH1BQ8WW43 257 aa13□□□□□ -0.33
DDX55-212ENST00000544738 STMN2Q93045 179 aa13□□□□□ -0.33
DDX55-212ENST00000544738 AKR1E2Q96JD6 320 aa13□□□□□ -0.33
DDX55-212ENST00000544738 OR4F4Q96R69 305 aa13□□□□□ -0.33
DDX55-212ENST00000544738 GPER1Q99527 375 aa13□□□□□ -0.33
DDX55-212ENST00000544738 OCSTAMPQ9BR26 566 aa13□□□□□ -0.33
DDX55-212ENST00000544738 NCOR1P1Q9H4R4 102 aa13□□□□□ -0.33
DDX55-212ENST00000544738 TENM2Q9NT68 2774 aa13□□□□□ -0.33
DDX55-212ENST00000544738 DYNC2H1Q8NCM8 4307 aaKnown RBP12.99□□□□□ -0.33
DDX55-212ENST00000544738 WI2-2373I1.2A0A1W2PRP0 233 aa12.99□□□□□ -0.33
DDX55-212ENST00000544738 TOR1AO14656 332 aa12.99□□□□□ -0.33
DDX55-212ENST00000544738 IGLV1-47P01700 117 aa12.99□□□□□ -0.33
DDX55-212ENST00000544738 CD33P20138 364 aa12.99□□□□□ -0.33
DDX55-212ENST00000544738 HABP2Q14520 560 aaPredicted RBP12.99□□□□□ -0.33
DDX55-212ENST00000544738 ZSCAN26Q16670 478 aa12.99□□□□□ -0.33
DDX55-212ENST00000544738 ZNF529Q6P280 563 aa12.99□□□□□ -0.33
DDX55-212ENST00000544738 C16orf82Q7Z2V1 217 aa12.99□□□□□ -0.33
DDX55-212ENST00000544738 SATL1Q86VE3 508 aa12.99□□□□□ -0.33
DDX55-212ENST00000544738 ZNF565Q8N9K5 539 aa12.99□□□□□ -0.33
DDX55-212ENST00000544738 OR51T1Q8NGJ9 327 aa12.99□□□□□ -0.33
DDX55-212ENST00000544738 CAPSLQ8WWF8 208 aa12.99□□□□□ -0.33
DDX55-212ENST00000544738 COQ2Q96H96 371 aa12.99□□□□□ -0.33
DDX55-212ENST00000544738 BARHL1Q9BZE3 327 aa12.99□□□□□ -0.33
DDX55-212ENST00000544738 ING3Q9NXR8 418 aa12.99□□□□□ -0.33
DDX55-212ENST00000544738 A0A087X0M5 115 aa12.98□□□□□ -0.33
DDX55-212ENST00000544738 A0A1B0GX30 115 aa12.98□□□□□ -0.33
DDX55-212ENST00000544738 H0YJX3 145 aa12.98□□□□□ -0.33
DDX55-212ENST00000544738 WBP4O75554 376 aaKnown RBP12.98□□□□□ -0.33
DDX55-212ENST00000544738 CD28P10747 220 aa12.98□□□□□ -0.33
DDX55-212ENST00000544738 GTF2A1P52655 376 aaPredicted RBP12.98□□□□□ -0.33
DDX55-212ENST00000544738 ATXN7L3Q14CW9 347 aaPredicted RBP12.98□□□□□ -0.33
DDX55-212ENST00000544738 RSU1Q15404 277 aa12.98□□□□□ -0.33
DDX55-212ENST00000544738 Q8NFD4 153 aa12.98□□□□□ -0.33
DDX55-212ENST00000544738 TNFAIP8L1Q8WVP5 186 aa12.98□□□□□ -0.33
DDX55-212ENST00000544738 NR1H4Q96RI1 486 aaPredicted RBP12.98□□□□□ -0.33
DDX55-212ENST00000544738 WNT10AQ9GZT5 417 aa12.98□□□□□ -0.33
DDX55-212ENST00000544738 LIN7BQ9HAP6 207 aa12.98□□□□□ -0.33
DDX55-212ENST00000544738 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.98□□□□□ -0.33
DDX55-212ENST00000544738 KIAA2026Q5HYC2 2103 aa12.97□□□□□ -0.33
DDX55-212ENST00000544738 SACSQ9NZJ4 4579 aa12.97□□□□□ -0.33
DDX55-212ENST00000544738 KBTBD11-OT1A0A1B0GTJ5 212 aa12.97□□□□□ -0.33
DDX55-212ENST00000544738 OOSP1A8MZH6 123 aa12.97□□□□□ -0.33
DDX55-212ENST00000544738 GABRPO00591 440 aa12.97□□□□□ -0.33
DDX55-212ENST00000544738 JUNBP17275 347 aaPredicted RBP12.97□□□□□ -0.33
DDX55-212ENST00000544738 SOX2P48431 317 aa12.97□□□□□ -0.33
DDX55-212ENST00000544738 BLCAPP62952 87 aa12.97□□□□□ -0.33
DDX55-212ENST00000544738 MED21Q13503 144 aa12.97□□□□□ -0.33
DDX55-212ENST00000544738 IL13RA2Q14627 380 aa12.97□□□□□ -0.33
DDX55-212ENST00000544738 SMN1Q16637 294 aaKnown RBP12.97□□□□□ -0.33
DDX55-212ENST00000544738 HLA-DRB5Q30154 266 aa12.97□□□□□ -0.33
DDX55-212ENST00000544738 PAN3Q58A45 887 aaKnown RBP12.97□□□□□ -0.33
DDX55-212ENST00000544738 TTC23Q5W5X9 447 aa12.97□□□□□ -0.33
DDX55-212ENST00000544738 CCDC144NLQ6NUI1 221 aa12.97□□□□□ -0.33
DDX55-212ENST00000544738 ASCL4Q6XD76 172 aa12.97□□□□□ -0.33
DDX55-212ENST00000544738 NDUFA11Q86Y39 141 aa12.97□□□□□ -0.33
DDX55-212ENST00000544738 CNIH3Q8TBE1 160 aa12.97□□□□□ -0.33
DDX55-212ENST00000544738 TMEM106AQ96A25 262 aa12.97□□□□□ -0.33
DDX55-212ENST00000544738 C8orf4Q9NR00 106 aa12.97□□□□□ -0.33
DDX55-212ENST00000544738 BABAM2Q9NXR7 383 aa12.97□□□□□ -0.33
DDX55-212ENST00000544738 MEIKINA0A087WXM9 373 aa12.96□□□□□ -0.33
DDX55-212ENST00000544738 BUB1B-PAK6H3BSN5 160 aa12.96□□□□□ -0.33
DDX55-212ENST00000544738 CGB3P0DN86 165 aa12.96□□□□□ -0.33
DDX55-212ENST00000544738 CGB7P0DN87 165 aa12.96□□□□□ -0.33
DDX55-212ENST00000544738 MYL12AP19105 171 aa12.96□□□□□ -0.33
DDX55-212ENST00000544738 C21orf33P30042 268 aaPredicted RBP12.96□□□□□ -0.33
DDX55-212ENST00000544738 MNDAP41218 407 aa12.96□□□□□ -0.33
DDX55-212ENST00000544738 VDAC2P45880 294 aaPredicted RBP12.96□□□□□ -0.33
DDX55-212ENST00000544738 KCNJ3P48549 501 aa12.96□□□□□ -0.33
DDX55-212ENST00000544738 ETV1P50549 477 aa12.96□□□□□ -0.33
DDX55-212ENST00000544738 PPP3R1P63098 170 aa12.96□□□□□ -0.33
DDX55-212ENST00000544738 PAX5Q02548 391 aa12.96□□□□□ -0.33
DDX55-212ENST00000544738 BAIAP2L2Q6UXY1 529 aa12.96□□□□□ -0.33
DDX55-212ENST00000544738 SETD9Q8NE22 299 aa12.96□□□□□ -0.33
DDX55-212ENST00000544738 OR51A2Q8NGJ7 313 aa12.96□□□□□ -0.33
DDX55-212ENST00000544738 OR9G1Q8NH87 305 aa12.96□□□□□ -0.33
DDX55-212ENST00000544738 WIPF2Q8TF74 440 aaPredicted RBP12.96□□□□□ -0.33
DDX55-212ENST00000544738 RGP1Q92546 391 aaPredicted RBP12.96□□□□□ -0.33
DDX55-212ENST00000544738 KIRREL1Q96J84 757 aa12.96□□□□□ -0.33
DDX55-212ENST00000544738 S100A13Q99584 98 aa12.96□□□□□ -0.33
DDX55-212ENST00000544738 FAM192AQ9GZU8 254 aa12.96□□□□□ -0.33
DDX55-212ENST00000544738 PPIL3Q9H2H8 161 aaKnown RBP12.96□□□□□ -0.33
DDX55-212ENST00000544738 ZNF286AQ9HBT8 521 aa12.96□□□□□ -0.33
DDX55-212ENST00000544738 TMEM138Q9NPI0 162 aa12.96□□□□□ -0.33
DDX55-212ENST00000544738 CHCHD3Q9NX63 227 aaKnown RBP12.96□□□□□ -0.33
DDX55-212ENST00000544738 TAS2R4Q9NYW5 299 aa12.96□□□□□ -0.33
DDX55-212ENST00000544738 DIMT1Q9UNQ2 313 aaKnown RBP12.96□□□□□ -0.33
DDX55-212ENST00000544738 EXOSC1Q9Y3B2 195 aaKnown RBP12.96□□□□□ -0.33
DDX55-212ENST00000544738 TRAV24A0A0B4J272 114 aa12.95□□□□□ -0.34
DDX55-212ENST00000544738 FAM172BPA6NC97 362 aa12.95□□□□□ -0.34
DDX55-212ENST00000544738 OGG1O15527 345 aa12.95□□□□□ -0.34
DDX55-212ENST00000544738 NFYBP25208 207 aa12.95□□□□□ -0.34
DDX55-212ENST00000544738 GDNFP39905 211 aa12.95□□□□□ -0.34
DDX55-212ENST00000544738 GLP1RP43220 463 aa12.95□□□□□ -0.34
DDX55-212ENST00000544738 C17orf58Q2M2W7 97 aa12.95□□□□□ -0.34
DDX55-212ENST00000544738 TPTE2P1Q5T6R2 138 aa12.95□□□□□ -0.34
DDX55-212ENST00000544738 OR2G6Q5TZ20 316 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms