RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 CLIC3O95833 236 aa15.66■□□□□ 0.1
TNFRSF1B-204ENST00000536782 RPSAP08865 295 aaKnown RBP15.66■□□□□ 0.1
TNFRSF1B-204ENST00000536782 FAM106CPP0CH98 169 aa15.66■□□□□ 0.1
TNFRSF1B-204ENST00000536782 MTNR1BP49286 362 aa15.66■□□□□ 0.1
TNFRSF1B-204ENST00000536782 ZP1P60852 638 aa15.66■□□□□ 0.1
TNFRSF1B-204ENST00000536782 C10orf99Q6UWK7 81 aa15.66■□□□□ 0.1
TNFRSF1B-204ENST00000536782 ZNF565Q8N9K5 539 aa15.66■□□□□ 0.1
TNFRSF1B-204ENST00000536782 RPEQ96AT9 228 aa15.66■□□□□ 0.1
TNFRSF1B-204ENST00000536782 LGALS12Q96DT0 336 aa15.66■□□□□ 0.1
TNFRSF1B-204ENST00000536782 KIRREL1Q96J84 757 aa15.66■□□□□ 0.1
TNFRSF1B-204ENST00000536782 H0YJX3 145 aa15.65■□□□□ 0.1
TNFRSF1B-204ENST00000536782 SULT1B1O43704 296 aa15.65■□□□□ 0.1
TNFRSF1B-204ENST00000536782 DUS4LO95620 317 aaKnown RBP15.65■□□□□ 0.1
TNFRSF1B-204ENST00000536782 GALEQ14376 348 aa15.65■□□□□ 0.1
TNFRSF1B-204ENST00000536782 ZIK1Q3SY52 487 aaPredicted RBP15.65■□□□□ 0.1
TNFRSF1B-204ENST00000536782 UTF1Q5T230 341 aa15.65■□□□□ 0.1
TNFRSF1B-204ENST00000536782 LHFPL3Q86UP9 236 aa15.65■□□□□ 0.1
TNFRSF1B-204ENST00000536782 SYS1Q8N2H4 156 aa15.65■□□□□ 0.1
TNFRSF1B-204ENST00000536782 OSR2Q8N2R0 312 aa15.65■□□□□ 0.1
TNFRSF1B-204ENST00000536782 PARP16Q8N5Y8 322 aa15.65■□□□□ 0.1
TNFRSF1B-204ENST00000536782 OR51T1Q8NGJ9 327 aa15.65■□□□□ 0.1
TNFRSF1B-204ENST00000536782 TOMM40LQ969M1 308 aa15.65■□□□□ 0.1
TNFRSF1B-204ENST00000536782 ALG8Q9BVK2 526 aa15.65■□□□□ 0.1
TNFRSF1B-204ENST00000536782 PCDHB16Q9NRJ7 776 aa15.65■□□□□ 0.1
TNFRSF1B-204ENST00000536782 MOB4Q9Y3A3 225 aa15.65■□□□□ 0.1
TNFRSF1B-204ENST00000536782 AMMECR1Q9Y4X0 333 aaPredicted RBP15.65■□□□□ 0.1
TNFRSF1B-204ENST00000536782 HSPE1-MOB4S4R3N1 261 aa15.65■□□□□ 0.1
TNFRSF1B-204ENST00000536782 HSPB6O14558 160 aa15.64■□□□□ 0.09
TNFRSF1B-204ENST00000536782 CGB3P0DN86 165 aa15.64■□□□□ 0.09
TNFRSF1B-204ENST00000536782 CGB7P0DN87 165 aa15.64■□□□□ 0.09
TNFRSF1B-204ENST00000536782 GLP1RP43220 463 aa15.64■□□□□ 0.09
TNFRSF1B-204ENST00000536782 ZSCAN26Q16670 478 aa15.64■□□□□ 0.09
TNFRSF1B-204ENST00000536782 PAN3Q58A45 887 aaKnown RBP15.64■□□□□ 0.09
TNFRSF1B-204ENST00000536782 ZNF691Q5VV52 312 aa15.64■□□□□ 0.09
TNFRSF1B-204ENST00000536782 ELP2Q6IA86 826 aa15.64■□□□□ 0.09
TNFRSF1B-204ENST00000536782 THNSL2Q86YJ6 484 aa15.64■□□□□ 0.09
TNFRSF1B-204ENST00000536782 CPNE2Q96FN4 548 aaPredicted RBP15.64■□□□□ 0.09
TNFRSF1B-204ENST00000536782 NR1H4Q96RI1 486 aaPredicted RBP15.64■□□□□ 0.09
TNFRSF1B-204ENST00000536782 BARHL1Q9BZE3 327 aa15.64■□□□□ 0.09
TNFRSF1B-204ENST00000536782 NCOR1P1Q9H4R4 102 aa15.64■□□□□ 0.09
TNFRSF1B-204ENST00000536782 ISG20L2Q9H9L3 353 aaKnown RBP15.64■□□□□ 0.09
TNFRSF1B-204ENST00000536782 AASSQ9UDR5 926 aa15.64■□□□□ 0.09
TNFRSF1B-204ENST00000536782 KIF25Q9UIL4 384 aa15.64■□□□□ 0.09
TNFRSF1B-204ENST00000536782 DHDHQ9UQ10 334 aa15.64■□□□□ 0.09
TNFRSF1B-204ENST00000536782 MEIKINA0A087WXM9 373 aa15.63■□□□□ 0.09
TNFRSF1B-204ENST00000536782 FAM90A18PA6NE21 464 aa15.63■□□□□ 0.09
TNFRSF1B-204ENST00000536782 FAM90A16PA6NEW6 464 aa15.63■□□□□ 0.09
TNFRSF1B-204ENST00000536782 FAM90A20PA6NIJ5 464 aa15.63■□□□□ 0.09
TNFRSF1B-204ENST00000536782 TMEM212A6NML5 194 aa15.63■□□□□ 0.09
TNFRSF1B-204ENST00000536782 FAM90A9PA6NNJ1 464 aa15.63■□□□□ 0.09
TNFRSF1B-204ENST00000536782 FAM90A12PA8MX19 464 aa15.63■□□□□ 0.09
TNFRSF1B-204ENST00000536782 FAM90A5PA8MXJ8 464 aa15.63■□□□□ 0.09
TNFRSF1B-204ENST00000536782 J3QR06 171 aa15.63■□□□□ 0.09
TNFRSF1B-204ENST00000536782 ZFPL1O95159 310 aa15.63■□□□□ 0.09
TNFRSF1B-204ENST00000536782 FAM90A15PP0C7V4 464 aa15.63■□□□□ 0.09
TNFRSF1B-204ENST00000536782 FAM90A13PP0C7W8 464 aa15.63■□□□□ 0.09
TNFRSF1B-204ENST00000536782 FAM90A14PP0C7W9 464 aa15.63■□□□□ 0.09
TNFRSF1B-204ENST00000536782 FAM90A24PP0C7X0 464 aa15.63■□□□□ 0.09
TNFRSF1B-204ENST00000536782 C21orf33P30042 268 aaPredicted RBP15.63■□□□□ 0.09
TNFRSF1B-204ENST00000536782 MRPL28Q13084 256 aaKnown RBP15.63■□□□□ 0.09
TNFRSF1B-204ENST00000536782 PXT1Q8NFP0 134 aa15.63■□□□□ 0.09
TNFRSF1B-204ENST00000536782 OR13A1Q8NGR1 328 aa15.63■□□□□ 0.09
TNFRSF1B-204ENST00000536782 OR5AK2Q8NH90 309 aa15.63■□□□□ 0.09
TNFRSF1B-204ENST00000536782 TSEN15Q8WW01 171 aaKnown RBP15.63■□□□□ 0.09
TNFRSF1B-204ENST00000536782 SLC29A1Q99808 456 aa15.63■□□□□ 0.09
TNFRSF1B-204ENST00000536782 INPP5EQ9NRR6 644 aa15.63■□□□□ 0.09
TNFRSF1B-204ENST00000536782 CALYQ9NYX4 217 aa15.63■□□□□ 0.09
TNFRSF1B-204ENST00000536782 PSMB11A5LHX3 300 aa15.62■□□□□ 0.09
TNFRSF1B-204ENST00000536782 K7EIL1 84 aa15.62■□□□□ 0.09
TNFRSF1B-204ENST00000536782 MPZL2O60487 215 aa15.62■□□□□ 0.09
TNFRSF1B-204ENST00000536782 BAG2O95816 211 aa15.62■□□□□ 0.09
TNFRSF1B-204ENST00000536782 FADS2O95864 444 aaKnown RBP15.62■□□□□ 0.09
TNFRSF1B-204ENST00000536782 SNRNP70P08621 437 aaKnown RBP15.62■□□□□ 0.09
TNFRSF1B-204ENST00000536782 CCDC159P0C7I6 412 aa15.62■□□□□ 0.09
TNFRSF1B-204ENST00000536782 LPCAT4Q643R3 524 aa15.62■□□□□ 0.09
TNFRSF1B-204ENST00000536782 OR56B4Q8NH76 319 aa15.62■□□□□ 0.09
TNFRSF1B-204ENST00000536782 CNIH3Q8TBE1 160 aa15.62■□□□□ 0.09
TNFRSF1B-204ENST00000536782 RDH12Q96NR8 316 aa15.62■□□□□ 0.09
TNFRSF1B-204ENST00000536782 PDCD1LG2Q9BQ51 273 aa15.62■□□□□ 0.09
TNFRSF1B-204ENST00000536782 IDI2-AS1Q9NZ38 188 aa15.62■□□□□ 0.09
TNFRSF1B-204ENST00000536782 GMPPBQ9Y5P6 360 aa15.62■□□□□ 0.09
TNFRSF1B-204ENST00000536782 TENM3Q9P273 2699 aa15.62■□□□□ 0.09
TNFRSF1B-204ENST00000536782 RYR3Q15413 4870 aa15.61■□□□□ 0.09
TNFRSF1B-204ENST00000536782 TRAV24A0A0B4J272 114 aa15.61■□□□□ 0.09
TNFRSF1B-204ENST00000536782 MAGEB3O15480 346 aa15.61■□□□□ 0.09
TNFRSF1B-204ENST00000536782 IL1AP01583 271 aa15.61■□□□□ 0.09
TNFRSF1B-204ENST00000536782 IGHV3-7P01780 117 aa15.61■□□□□ 0.09
TNFRSF1B-204ENST00000536782 GABRB1P18505 474 aa15.61■□□□□ 0.09
TNFRSF1B-204ENST00000536782 RAB3AP20336 220 aa15.61■□□□□ 0.09
TNFRSF1B-204ENST00000536782 MADCAM1Q13477 382 aa15.61■□□□□ 0.09
TNFRSF1B-204ENST00000536782 HES1Q14469 280 aa15.61■□□□□ 0.09
TNFRSF1B-204ENST00000536782 IL13RA2Q14627 380 aa15.61■□□□□ 0.09
TNFRSF1B-204ENST00000536782 OR51D1Q8NGF3 324 aa15.61■□□□□ 0.09
TNFRSF1B-204ENST00000536782 LEAP2Q969E1 77 aa15.61■□□□□ 0.09
TNFRSF1B-204ENST00000536782 Q96MT0 163 aa15.61■□□□□ 0.09
TNFRSF1B-204ENST00000536782 GPER1Q99527 375 aa15.61■□□□□ 0.09
TNFRSF1B-204ENST00000536782 LINC00574Q9H8X3 128 aa15.61■□□□□ 0.09
TNFRSF1B-204ENST00000536782 C8orf4Q9NR00 106 aa15.61■□□□□ 0.09
TNFRSF1B-204ENST00000536782 ERVK13-1Q9NX77 482 aa15.61■□□□□ 0.09
TNFRSF1B-204ENST00000536782 PSG11Q9UQ72 335 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms