RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 PHYHIPQ92561 330 aa14.09□□□□□ -0.15
USP35-202ENST00000528910 NR1H4Q96RI1 486 aaPredicted RBP14.09□□□□□ -0.15
USP35-202ENST00000528910 S100A13Q99584 98 aa14.09□□□□□ -0.15
USP35-202ENST00000528910 UQCC2Q9BRT2 126 aa14.09□□□□□ -0.15
USP35-202ENST00000528910 TMED9Q9BVK6 235 aa14.09□□□□□ -0.15
USP35-202ENST00000528910 MEGF9Q9H1U4 602 aa14.09□□□□□ -0.15
USP35-202ENST00000528910 PPIL3Q9H2H8 161 aaKnown RBP14.09□□□□□ -0.15
USP35-202ENST00000528910 PCDHB16Q9NRJ7 776 aa14.09□□□□□ -0.15
USP35-202ENST00000528910 TNFRSF19Q9NS68 423 aa14.09□□□□□ -0.15
USP35-202ENST00000528910 MRPS28Q9Y2Q9 187 aaKnown RBP14.09□□□□□ -0.15
USP35-202ENST00000528910 TBL2Q9Y4P3 447 aaKnown RBP14.09□□□□□ -0.15
USP35-202ENST00000528910 A0A1W2PP11 408 aa14.08□□□□□ -0.16
USP35-202ENST00000528910 MEGF11A6BM72 1044 aa14.08□□□□□ -0.16
USP35-202ENST00000528910 BTBD17A6NE02 478 aa14.08□□□□□ -0.16
USP35-202ENST00000528910 NDUFA7O95182 113 aa14.08□□□□□ -0.16
USP35-202ENST00000528910 SLC22A6Q4U2R8 563 aa14.08□□□□□ -0.16
USP35-202ENST00000528910 FAM27D1Q5T7N8 215 aa14.08□□□□□ -0.16
USP35-202ENST00000528910 RSBN1Q5VWQ0 802 aaPredicted RBP14.08□□□□□ -0.16
USP35-202ENST00000528910 LIPKQ5VXJ0 399 aa14.08□□□□□ -0.16
USP35-202ENST00000528910 AWAT2Q6E213 333 aa14.08□□□□□ -0.16
USP35-202ENST00000528910 HEPN1Q6WQI6 88 aa14.08□□□□□ -0.16
USP35-202ENST00000528910 OR4D6Q8NGJ1 314 aa14.08□□□□□ -0.16
USP35-202ENST00000528910 MRPS24Q96EL2 167 aaKnown RBP14.08□□□□□ -0.16
USP35-202ENST00000528910 CCDC90BQ9GZT6 254 aa14.08□□□□□ -0.16
USP35-202ENST00000528910 TMEM133Q9H2Q1 129 aa14.08□□□□□ -0.16
USP35-202ENST00000528910 OR6C3Q9NZP0 311 aa14.08□□□□□ -0.16
USP35-202ENST00000528910 C1RLQ9NZP8 487 aa14.08□□□□□ -0.16
USP35-202ENST00000528910 ZNF581Q9P0T4 197 aa14.08□□□□□ -0.16
USP35-202ENST00000528910 MMP24Q9Y5R2 645 aa14.08□□□□□ -0.16
USP35-202ENST00000528910 IGHV2-26A0A0B4J1V2 119 aa14.07□□□□□ -0.16
USP35-202ENST00000528910 ZNF729A6NN14 1252 aaPredicted RBP14.07□□□□□ -0.16
USP35-202ENST00000528910 HSPB6O14558 160 aa14.07□□□□□ -0.16
USP35-202ENST00000528910 GEMIN2O14893 280 aaKnown RBP14.07□□□□□ -0.16
USP35-202ENST00000528910 DENRO43583 198 aaKnown RBP14.07□□□□□ -0.16
USP35-202ENST00000528910 MMP23AO75900 390 aa14.07□□□□□ -0.16
USP35-202ENST00000528910 OR7C1O76099 320 aaPredicted RBP14.07□□□□□ -0.16
USP35-202ENST00000528910 UCHL1P09936 223 aa14.07□□□□□ -0.16
USP35-202ENST00000528910 GTF2F2P13984 249 aa14.07□□□□□ -0.16
USP35-202ENST00000528910 CPEP16870 476 aa14.07□□□□□ -0.16
USP35-202ENST00000528910 PSMA1P25786 263 aaKnown RBP14.07□□□□□ -0.16
USP35-202ENST00000528910 RELBQ01201 579 aa14.07□□□□□ -0.16
USP35-202ENST00000528910 TRAM1Q15629 374 aa14.07□□□□□ -0.16
USP35-202ENST00000528910 LRRC75BQ2VPJ9 315 aa14.07□□□□□ -0.16
USP35-202ENST00000528910 LDLRAD2Q5SZI1 272 aa14.07□□□□□ -0.16
USP35-202ENST00000528910 GLIPR1L1Q6UWM5 242 aa14.07□□□□□ -0.16
USP35-202ENST00000528910 GDPGP1Q6ZNW5 385 aa14.07□□□□□ -0.16
USP35-202ENST00000528910 ZNF367Q7RTV3 350 aa14.07□□□□□ -0.16
USP35-202ENST00000528910 LRRTM1Q86UE6 522 aa14.07□□□□□ -0.16
USP35-202ENST00000528910 FOXRED1Q96CU9 486 aaPredicted RBP14.07□□□□□ -0.16
USP35-202ENST00000528910 DPCDQ9BVM2 203 aaPredicted RBP14.07□□□□□ -0.16
USP35-202ENST00000528910 CLEC7AQ9BXN2 247 aa14.07□□□□□ -0.16
USP35-202ENST00000528910 RCC2Q9P258 522 aaKnown RBP14.07□□□□□ -0.16
USP35-202ENST00000528910 RRP15Q9Y3B9 282 aaKnown RBP14.07□□□□□ -0.16
USP35-202ENST00000528910 A0A087X0M5 115 aa14.06□□□□□ -0.16
USP35-202ENST00000528910 A0A1B0GX30 115 aa14.06□□□□□ -0.16
USP35-202ENST00000528910 VGLL3A8MV65 326 aa14.06□□□□□ -0.16
USP35-202ENST00000528910 MRPS14O60783 128 aaKnown RBP14.06□□□□□ -0.16
USP35-202ENST00000528910 ARG1P05089 322 aa14.06□□□□□ -0.16
USP35-202ENST00000528910 HSMCR30P0CW71 290 aa14.06□□□□□ -0.16
USP35-202ENST00000528910 CGB3P0DN86 165 aa14.06□□□□□ -0.16
USP35-202ENST00000528910 CGB7P0DN87 165 aa14.06□□□□□ -0.16
USP35-202ENST00000528910 CD34P28906 385 aa14.06□□□□□ -0.16
USP35-202ENST00000528910 MAP2K4P45985 399 aa14.06□□□□□ -0.16
USP35-202ENST00000528910 RAG2P55895 527 aa14.06□□□□□ -0.16
USP35-202ENST00000528910 LGALS4P56470 323 aa14.06□□□□□ -0.16
USP35-202ENST00000528910 RPS25P62851 125 aaKnown RBP14.06□□□□□ -0.16
USP35-202ENST00000528910 C17orf58Q2M2W7 97 aa14.06□□□□□ -0.16
USP35-202ENST00000528910 HSD17B12Q53GQ0 312 aa14.06□□□□□ -0.16
USP35-202ENST00000528910 PRAMEF5Q5TYX0 476 aa14.06□□□□□ -0.16
USP35-202ENST00000528910 LHFPL4Q7Z7J7 247 aa14.06□□□□□ -0.16
USP35-202ENST00000528910 C3orf56Q8N813 242 aa14.06□□□□□ -0.16
USP35-202ENST00000528910 SUMF2Q8NBJ7 301 aa14.06□□□□□ -0.16
USP35-202ENST00000528910 PLPPR1Q8TBJ4 325 aa14.06□□□□□ -0.16
USP35-202ENST00000528910 TAF15Q92804 592 aaKnown RBP eCLIP14.06□□□□□ -0.16
USP35-202ENST00000528910 MGLLQ99685 303 aa14.06□□□□□ -0.16
USP35-202ENST00000528910 Q9H521 79 aa14.06□□□□□ -0.16
USP35-202ENST00000528910 LINC00574Q9H8X3 128 aa14.06□□□□□ -0.16
USP35-202ENST00000528910 TCF7L1Q9HCS4 588 aa14.06□□□□□ -0.16
USP35-202ENST00000528910 KIF25Q9UIL4 384 aa14.06□□□□□ -0.16
USP35-202ENST00000528910 FAM90A10PA6NDY2 464 aa14.05□□□□□ -0.16
USP35-202ENST00000528910 FAM90A18PA6NE21 464 aa14.05□□□□□ -0.16
USP35-202ENST00000528910 FAM90A16PA6NEW6 464 aa14.05□□□□□ -0.16
USP35-202ENST00000528910 FAM90A20PA6NIJ5 464 aa14.05□□□□□ -0.16
USP35-202ENST00000528910 FAM90A7PA6NKC0 464 aa14.05□□□□□ -0.16
USP35-202ENST00000528910 FAM90A22PA8MWA6 464 aa14.05□□□□□ -0.16
USP35-202ENST00000528910 FAM90A12PA8MX19 464 aa14.05□□□□□ -0.16
USP35-202ENST00000528910 FAM90A5PA8MXJ8 464 aa14.05□□□□□ -0.16
USP35-202ENST00000528910 FAM90A23PA8MXZ1 464 aa14.05□□□□□ -0.16
USP35-202ENST00000528910 H3BUX3 64 aa14.05□□□□□ -0.16
USP35-202ENST00000528910 CRYBA1P05813 215 aa14.05□□□□□ -0.16
USP35-202ENST00000528910 FAM90A15PP0C7V4 464 aa14.05□□□□□ -0.16
USP35-202ENST00000528910 FAM90A13PP0C7W8 464 aa14.05□□□□□ -0.16
USP35-202ENST00000528910 FAM90A14PP0C7W9 464 aa14.05□□□□□ -0.16
USP35-202ENST00000528910 FAM90A24PP0C7X0 464 aa14.05□□□□□ -0.16
USP35-202ENST00000528910 CD37P11049 281 aa14.05□□□□□ -0.16
USP35-202ENST00000528910 MDKP21741 143 aaPredicted RBP14.05□□□□□ -0.16
USP35-202ENST00000528910 CDK2P24941 298 aa14.05□□□□□ -0.16
USP35-202ENST00000528910 GDNFP39905 211 aa14.05□□□□□ -0.16
USP35-202ENST00000528910 GLP1RP43220 463 aa14.05□□□□□ -0.16
USP35-202ENST00000528910 MINOS1Q5TGZ0 78 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms