RNA–Protein interactions for RNA: ENST00000509638.5

LIMCH1-211, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-211ENST00000509638 OR4M2Q8NGB6 313 aa24.46■■□□□ 1.51
LIMCH1-211ENST00000509638 OR56B1Q8NGI3 324 aa24.46■■□□□ 1.51
LIMCH1-211ENST00000509638 DYNC2LI1Q8TCX1 351 aa24.46■■□□□ 1.51
LIMCH1-211ENST00000509638 SLC25A38Q96DW6 304 aa24.46■■□□□ 1.51
LIMCH1-211ENST00000509638 COQ2Q96H96 371 aa24.46■■□□□ 1.51
LIMCH1-211ENST00000509638 NEDD4LQ96PU5 975 aa24.46■■□□□ 1.51
LIMCH1-211ENST00000509638 RHBDL2Q9NX52 303 aa24.46■■□□□ 1.51
LIMCH1-211ENST00000509638 SPATA2Q9UM82 520 aa24.46■■□□□ 1.51
LIMCH1-211ENST00000509638 MTORP42345 2549 aa24.46■■□□□ 1.51
LIMCH1-211ENST00000509638 A0A1W2PQ09 198 aa24.46■■□□□ 1.51
LIMCH1-211ENST00000509638 ZNF701M0R085 212 aaPredicted RBP24.46■■□□□ 1.51
LIMCH1-211ENST00000509638 P2RX3P56373 397 aa24.46■■□□□ 1.51
LIMCH1-211ENST00000509638 BTNL3Q6UXE8 466 aa24.46■■□□□ 1.51
LIMCH1-211ENST00000509638 CLEC9AQ6UXN8 241 aa24.46■■□□□ 1.51
LIMCH1-211ENST00000509638 RTN4RL2Q86UN3 420 aa24.46■■□□□ 1.51
LIMCH1-211ENST00000509638 FAM185AQ8N0U4 392 aa24.46■■□□□ 1.51
LIMCH1-211ENST00000509638 C8orf46Q8TAG6 207 aa24.46■■□□□ 1.51
LIMCH1-211ENST00000509638 MCRIP1C9JLW8 97 aa24.45■■□□□ 1.5
LIMCH1-211ENST00000509638 H3BUI4 141 aa24.45■■□□□ 1.5
LIMCH1-211ENST00000509638 KCNJ3P48549 501 aa24.45■■□□□ 1.5
LIMCH1-211ENST00000509638 FAM189A2Q15884 450 aa24.45■■□□□ 1.5
LIMCH1-211ENST00000509638 KRBOX4Q5JUW0 171 aa24.45■■□□□ 1.5
LIMCH1-211ENST00000509638 LY6G5BQ8NDX9 201 aa24.45■■□□□ 1.5
LIMCH1-211ENST00000509638 PLPPR1Q8TBJ4 325 aa24.45■■□□□ 1.5
LIMCH1-211ENST00000509638 ATG5Q9H1Y0 275 aa24.45■■□□□ 1.5
LIMCH1-211ENST00000509638 INSIG2Q9Y5U4 225 aa24.45■■□□□ 1.5
LIMCH1-211ENST00000509638 KIAA2026Q5HYC2 2103 aa24.44■■□□□ 1.5
LIMCH1-211ENST00000509638 METTL21EPA6NDL7 271 aa24.44■■□□□ 1.5
LIMCH1-211ENST00000509638 FOXI3A8MTJ6 420 aaPredicted RBP24.44■■□□□ 1.5
LIMCH1-211ENST00000509638 PPIAL4GP0DN37 164 aa24.44■■□□□ 1.5
LIMCH1-211ENST00000509638 SOX6P35712 828 aa24.44■■□□□ 1.5
LIMCH1-211ENST00000509638 MOGAT2Q3SYC2 334 aa24.44■■□□□ 1.5
LIMCH1-211ENST00000509638 C6orf201Q7Z4U5 140 aa24.44■■□□□ 1.5
LIMCH1-211ENST00000509638 AP3S1Q92572 193 aa24.44■■□□□ 1.5
LIMCH1-211ENST00000509638 CCDC59Q9P031 241 aaKnown RBP24.44■■□□□ 1.5
LIMCH1-211ENST00000509638 KCNS2Q9ULS6 477 aa24.44■■□□□ 1.5
LIMCH1-211ENST00000509638 MEX3AA1L020 520 aaKnown RBP24.43■■□□□ 1.5
LIMCH1-211ENST00000509638 ZNF182P17025 639 aaPredicted RBP24.43■■□□□ 1.5
LIMCH1-211ENST00000509638 GATA3P23771 443 aa24.43■■□□□ 1.5
LIMCH1-211ENST00000509638 ERP29P30040 261 aaKnown RBP24.43■■□□□ 1.5
LIMCH1-211ENST00000509638 GLIPR1P48060 266 aa24.43■■□□□ 1.5
LIMCH1-211ENST00000509638 RBM39Q14498 530 aaKnown RBP24.43■■□□□ 1.5
LIMCH1-211ENST00000509638 SAMD12Q8N8I0 201 aa24.43■■□□□ 1.5
LIMCH1-211ENST00000509638 DYRK2Q92630 601 aa24.43■■□□□ 1.5
LIMCH1-211ENST00000509638 GSX1Q9H4S2 264 aaPredicted RBP24.43■■□□□ 1.5
LIMCH1-211ENST00000509638 HIVEP2P31629 2446 aa24.43■■□□□ 1.5
LIMCH1-211ENST00000509638 KIR2DS1A0A191URI9 304 aa24.42■■□□□ 1.5
LIMCH1-211ENST00000509638 LIPFP07098 398 aa24.42■■□□□ 1.5
LIMCH1-211ENST00000509638 RSBN1Q5VWQ0 802 aaPredicted RBP24.42■■□□□ 1.5
LIMCH1-211ENST00000509638 SULT4A1Q9BR01 284 aa24.42■■□□□ 1.5
LIMCH1-211ENST00000509638 YAE1D1Q9NRH1 226 aa24.42■■□□□ 1.5
LIMCH1-211ENST00000509638 NDUFA13Q9P0J0 144 aa24.42■■□□□ 1.5
LIMCH1-211ENST00000509638 ONECUT1Q9UBC0 465 aa24.42■■□□□ 1.5
LIMCH1-211ENST00000509638 UBE2QL1A1L167 161 aa24.42■■□□□ 1.5
LIMCH1-211ENST00000509638 FUOMA2VDF0 154 aa24.42■■□□□ 1.5
LIMCH1-211ENST00000509638 PAX5Q02548 391 aa24.42■■□□□ 1.5
LIMCH1-211ENST00000509638 ZNF273Q14593 569 aa24.42■■□□□ 1.5
LIMCH1-211ENST00000509638 FOXB2Q5VYV0 432 aa24.42■■□□□ 1.5
LIMCH1-211ENST00000509638 FAHD2BQ6P2I3 314 aaPredicted RBP24.42■■□□□ 1.5
LIMCH1-211ENST00000509638 TCF23Q7RTU1 214 aa24.42■■□□□ 1.5
LIMCH1-211ENST00000509638 ACOT12Q8WYK0 555 aa24.42■■□□□ 1.5
LIMCH1-211ENST00000509638 FAHD2AQ96GK7 314 aa24.42■■□□□ 1.5
LIMCH1-211ENST00000509638 ARHGAP5-AS1Q96IT6 56 aa24.42■■□□□ 1.5
LIMCH1-211ENST00000509638 PLEKHJ1Q9NW61 149 aa24.42■■□□□ 1.5
LIMCH1-211ENST00000509638 ETAA1Q9NY74 926 aa24.42■■□□□ 1.5
LIMCH1-211ENST00000509638 COMMD3Q9UBI1 195 aa24.42■■□□□ 1.5
LIMCH1-211ENST00000509638 LPAR3Q9UBY5 353 aa24.42■■□□□ 1.5
LIMCH1-211ENST00000509638 KIF25Q9UIL4 384 aa24.42■■□□□ 1.5
LIMCH1-211ENST00000509638 ODAMA1E959 279 aa24.41■■□□□ 1.5
LIMCH1-211ENST00000509638 RAB27BO00194 218 aa24.41■■□□□ 1.5
LIMCH1-211ENST00000509638 GLAP06280 429 aa24.41■■□□□ 1.5
LIMCH1-211ENST00000509638 UBE2NLQ5JXB2 153 aa24.41■■□□□ 1.5
LIMCH1-211ENST00000509638 TMEM200BQ69YZ2 307 aa24.41■■□□□ 1.5
LIMCH1-211ENST00000509638 OR10R2Q8NGX6 335 aa24.41■■□□□ 1.5
LIMCH1-211ENST00000509638 RAB3CQ96E17 227 aa24.41■■□□□ 1.5
LIMCH1-211ENST00000509638 TMEM50BP56557 158 aa24.4■■□□□ 1.5
LIMCH1-211ENST00000509638 MEF2CQ06413 473 aaPredicted RBP24.4■■□□□ 1.5
LIMCH1-211ENST00000509638 DYNC1I2Q13409 638 aaKnown RBP24.4■■□□□ 1.5
LIMCH1-211ENST00000509638 PLAC9Q5JTB6 97 aa24.4■■□□□ 1.5
LIMCH1-211ENST00000509638 DCUN1D5Q9BTE7 237 aa24.4■■□□□ 1.5
LIMCH1-211ENST00000509638 FAAP24Q9BTP7 215 aa24.4■■□□□ 1.5
LIMCH1-211ENST00000509638 HSF4Q9ULV5 492 aa24.4■■□□□ 1.5
LIMCH1-211ENST00000509638 MEIKINA0A087WXM9 373 aa24.39■■□□□ 1.5
LIMCH1-211ENST00000509638 hADV38S2A0JD32 116 aa24.39■■□□□ 1.5
LIMCH1-211ENST00000509638 ZNF497Q6ZNH5 498 aa24.39■■□□□ 1.5
LIMCH1-211ENST00000509638 Q6ZTK2 550 aa24.39■■□□□ 1.5
LIMCH1-211ENST00000509638 TRAPPC6BQ86SZ2 158 aa24.39■■□□□ 1.5
LIMCH1-211ENST00000509638 PECRQ9BY49 303 aa24.39■■□□□ 1.5
LIMCH1-211ENST00000509638 LINC00312Q9Y6C7 94 aa24.39■■□□□ 1.5
LIMCH1-211ENST00000509638 TMEM30CPA0ZSE6 113 aa24.38■■□□□ 1.49
LIMCH1-211ENST00000509638 A8MV72 311 aaPredicted RBP24.38■■□□□ 1.49
LIMCH1-211ENST00000509638 J3QLI3 93 aa24.38■■□□□ 1.49
LIMCH1-211ENST00000509638 SLC35E4Q6ICL7 350 aa24.38■■□□□ 1.49
LIMCH1-211ENST00000509638 Q71RC1 249 aaPredicted RBP24.38■■□□□ 1.49
LIMCH1-211ENST00000509638 TMPRSS13Q9BYE2 586 aa24.38■■□□□ 1.49
LIMCH1-211ENST00000509638 C7orf69Q9H7B7 122 aa24.38■■□□□ 1.49
LIMCH1-211ENST00000509638 A0A075B6Q4 140 aa24.37■■□□□ 1.49
LIMCH1-211ENST00000509638 SCGNO76038 276 aa24.37■■□□□ 1.49
LIMCH1-211ENST00000509638 CCL3L1P16619 93 aa24.37■■□□□ 1.49
LIMCH1-211ENST00000509638 ARF6P62330 175 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms