RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 METTL1Q9UBP6 276 aaKnown RBP7.52□□□□□ -1.21
LIMCH1-209ENST00000509277 LPAR3Q9UBY5 353 aa7.52□□□□□ -1.21
LIMCH1-209ENST00000509277 FZR1Q9UM11 496 aa7.52□□□□□ -1.21
LIMCH1-209ENST00000509277 MRPS18CQ9Y3D5 142 aaKnown RBP7.52□□□□□ -1.21
LIMCH1-209ENST00000509277 PTPN13Q12923 2485 aa7.52□□□□□ -1.21
LIMCH1-209ENST00000509277 AHRRA9YTQ3 701 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 PRR32B1ATL7 298 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 GNLYP22749 145 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 TAS2R19P59542 299 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 ZNF880Q6PDB4 577 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 WFDC8Q8IUA0 241 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 SLC26A10Q8NG04 563 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 TMEM37Q8WXS4 190 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 SF3B5Q9BWJ5 86 aaKnown RBP7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 C1orf198Q9H425 327 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 BARX1Q9HBU1 254 aaPredicted RBP7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 ZNF701Q9NV72 531 aaPredicted RBP7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 FAM215AQ9Y5M1 114 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 FLNCQ14315 2725 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 ZNF878C9JN71 531 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 H7C417 338 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 IFNL4K9M1U5 179 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 NPSP0C0P6 89 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 CAV2P51636 162 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 ACTBP60709 375 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 RAB1AP62820 205 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 ACTG1P63261 375 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 ABLIM2Q6H8Q1 611 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 KCTD18Q6PI47 426 aaPredicted RBP7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 CXorf67Q86X51 503 aaPredicted RBP7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 FAM185AQ8N0U4 392 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 TMEM217Q8N7C4 229 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 ZSCAN4Q8NAM6 433 aaPredicted RBP7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 FRZBQ92765 325 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 REEP6Q96HR9 211 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 PGAM5Q96HS1 289 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 CKLFQ9UBR5 152 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 MTFP1Q9UDX5 166 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 RFNGQ9Y644 331 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 DOPEY2Q9Y3R5 2298 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 C5orf49A4QMS7 147 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 NKX2-6A6NCS4 301 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 H0YL77 283 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 SOD3P08294 240 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 OR2T7P0C7T2 308 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 PGA5P0DJD9 388 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 GNB3P16520 340 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 ZNF83P51522 516 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 PLP2Q04941 152 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 MICBQ29980 383 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 DMKNQ6E0U4 476 aaPredicted RBP7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 SLC22A24Q8N4F4 322 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 ST6GALNAC3Q8NDV1 305 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 OR2T27Q8NH04 317 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 OR2AE1Q8NHA4 323 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 RAB40AQ8WXH6 277 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 GMPPAQ96IJ6 420 aaPredicted RBP7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 RARRES2Q99969 163 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 TAS2R8Q9NYW2 309 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 LRP12Q9Y561 859 aa7.51□□□□□ -1.21
LIMCH1-209ENST00000509277 NOTCH2Q04721 2471 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 OR5H1A6NKK0 313 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 P2RY10O00398 339 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 SFTPCP11686 197 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 RPS2P15880 293 aaKnown RBP7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 ADRA2CP18825 462 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 KIR2DL2P43627 348 aaPredicted RBP7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 SLC25A1P53007 311 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 TGFBR3Q03167 851 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 GPR157Q5UAW9 335 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 FBXW9Q5XUX1 488 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 ANKRD16Q6P6B7 361 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 BATF2Q8N1L9 274 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 EIF4E3Q8N5X7 224 aaKnown RBP7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 OTOSQ8NHW6 89 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 RND1Q92730 232 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 MRPL13Q9BYD1 178 aaKnown RBP7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 PRDM14Q9GZV8 571 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 RNF122Q9H9V4 155 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 KPTNQ9Y664 436 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 KIAA2026Q5HYC2 2103 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 CTAG2O75638 210 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 FXYD4P59646 89 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 IAH1Q2TAA2 248 aaPredicted RBP7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 SP6Q3SY56 376 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 MOGAT2Q3SYC2 334 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 WDR25Q64LD2 544 aaPredicted RBP7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 RPL22L1Q6P5R6 122 aaKnown RBP7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 ABHD12BQ7Z5M8 362 aaPredicted RBP7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 C20orf196Q8IYI0 205 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 COMMD1Q8N668 190 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 ZNF485Q8NCK3 441 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 VSIG4Q9Y279 399 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 LHFPL6Q9Y693 200 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 TMEM14AQ9Y6G1 99 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 ZFP92A6NM28 416 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 ZG16O60844 167 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 WDR1O75083 606 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 TACSTD2P09758 323 aa7.5□□□□□ -1.21
LIMCH1-209ENST00000509277 CD37P11049 281 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms