RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	OR13A1	Q8NGR1	328 aa		10.75	□□□□□ -0.69
SAMM50-204	ENST00000493161	OR10AC1	Q8NH08	325 aa		10.75	□□□□□ -0.69
SAMM50-204	ENST00000493161	DNAJC9	Q8WXX5	260 aa		10.75	□□□□□ -0.69
SAMM50-204	ENST00000493161	C10orf35	Q96D05	121 aa		10.75	□□□□□ -0.69
SAMM50-204	ENST00000493161	PSG11	Q9UQ72	335 aa		10.75	□□□□□ -0.69
SAMM50-204	ENST00000493161		A0A1W2PPE3	182 aa		10.74	□□□□□ -0.69
SAMM50-204	ENST00000493161	DEGS1	O15121	323 aa		10.74	□□□□□ -0.69
SAMM50-204	ENST00000493161	FGF16	O43320	207 aa		10.74	□□□□□ -0.69
SAMM50-204	ENST00000493161	SULT1C4	O75897	302 aa		10.74	□□□□□ -0.69
SAMM50-204	ENST00000493161	ZFPL1	O95159	310 aa		10.74	□□□□□ -0.69
SAMM50-204	ENST00000493161	OR2T7	P0C7T2	308 aa		10.74	□□□□□ -0.69
SAMM50-204	ENST00000493161	UBC	P0CG48	685 aa	Known RBP	10.74	□□□□□ -0.69
SAMM50-204	ENST00000493161	PRKACB	P22694	351 aa		10.74	□□□□□ -0.69
SAMM50-204	ENST00000493161	GLP1R	P43220	463 aa		10.74	□□□□□ -0.69
SAMM50-204	ENST00000493161	GNG10	P50151	68 aa		10.74	□□□□□ -0.69
SAMM50-204	ENST00000493161	SLC35B1	P78383	322 aa		10.74	□□□□□ -0.69
SAMM50-204	ENST00000493161	GID4	Q8IVV7	300 aa		10.74	□□□□□ -0.69
SAMM50-204	ENST00000493161	COMMD1	Q8N668	190 aa		10.74	□□□□□ -0.69
SAMM50-204	ENST00000493161	OR51A4	Q8NGJ6	313 aa		10.74	□□□□□ -0.69
SAMM50-204	ENST00000493161	RFESD	Q8TAC1	157 aa		10.74	□□□□□ -0.69
SAMM50-204	ENST00000493161	UTP4	Q969X6	686 aa	Known RBP	10.74	□□□□□ -0.69
SAMM50-204	ENST00000493161	NRBF2	Q96F24	287 aa		10.74	□□□□□ -0.69
SAMM50-204	ENST00000493161	HRASLS5	Q96KN8	279 aa		10.74	□□□□□ -0.69
SAMM50-204	ENST00000493161	OPALIN	Q96PE5	141 aa		10.74	□□□□□ -0.69
SAMM50-204	ENST00000493161	CALY	Q9NYX4	217 aa		10.74	□□□□□ -0.69
SAMM50-204	ENST00000493161	ZMAT5	Q9UDW3	170 aa	Known RBP	10.74	□□□□□ -0.69
SAMM50-204	ENST00000493161	WARS2	Q9UGM6	360 aa	Known RBP	10.74	□□□□□ -0.69
SAMM50-204	ENST00000493161	KIF25	Q9UIL4	384 aa		10.74	□□□□□ -0.69
SAMM50-204	ENST00000493161	GNG8	Q9UK08	70 aa		10.74	□□□□□ -0.69
SAMM50-204	ENST00000493161	IGHV3-72	A0A0B4J1Y9	119 aa		10.73	□□□□□ -0.69
SAMM50-204	ENST00000493161	TRAV39	A0A0B4J263	110 aa		10.73	□□□□□ -0.69
SAMM50-204	ENST00000493161	TCRBV3S1	A0A5B6	114 aa		10.73	□□□□□ -0.69
SAMM50-204	ENST00000493161	SEC14L6	B5MCN3	397 aa		10.73	□□□□□ -0.69
SAMM50-204	ENST00000493161	ZNF20	P17024	532 aa		10.73	□□□□□ -0.69
SAMM50-204	ENST00000493161	HTR1F	P30939	366 aa		10.73	□□□□□ -0.69
SAMM50-204	ENST00000493161	POLR2I	P36954	125 aa	Known RBP	10.73	□□□□□ -0.69
SAMM50-204	ENST00000493161	NANOS3	P60323	173 aa	Known RBP	10.73	□□□□□ -0.69
SAMM50-204	ENST00000493161	BNIP1	Q12981	228 aa		10.73	□□□□□ -0.69
SAMM50-204	ENST00000493161	MADCAM1	Q13477	382 aa		10.73	□□□□□ -0.69
SAMM50-204	ENST00000493161	TEX38	Q6PEX7	206 aa		10.73	□□□□□ -0.69
SAMM50-204	ENST00000493161	FOXRED2	Q8IWF2	684 aa		10.73	□□□□□ -0.69
SAMM50-204	ENST00000493161	OR5M8	Q8NGP6	311 aa		10.73	□□□□□ -0.69
SAMM50-204	ENST00000493161	OR13C9	Q8NGT0	318 aa		10.73	□□□□□ -0.69
SAMM50-204	ENST00000493161	OR2G2	Q8NGZ5	317 aa		10.73	□□□□□ -0.69
SAMM50-204	ENST00000493161	MUC7	Q8TAX7	377 aa		10.73	□□□□□ -0.69
SAMM50-204	ENST00000493161	OSBPL10	Q9BXB5	764 aa		10.73	□□□□□ -0.69
SAMM50-204	ENST00000493161	PRRG3	Q9BZD7	231 aa		10.73	□□□□□ -0.69
SAMM50-204	ENST00000493161	NEK6	Q9HC98	313 aa		10.73	□□□□□ -0.69
SAMM50-204	ENST00000493161	PCDHB16	Q9NRJ7	776 aa		10.73	□□□□□ -0.69
SAMM50-204	ENST00000493161	KRT84	Q9NSB2	600 aa		10.73	□□□□□ -0.69
SAMM50-204	ENST00000493161	IDI2-AS1	Q9NZ38	188 aa		10.73	□□□□□ -0.69
SAMM50-204	ENST00000493161	OR6C3	Q9NZP0	311 aa		10.73	□□□□□ -0.69
SAMM50-204	ENST00000493161	FRRS1L	Q9P0K9	344 aa		10.73	□□□□□ -0.69
SAMM50-204	ENST00000493161	AMMECR1	Q9Y4X0	333 aa	Predicted RBP	10.73	□□□□□ -0.69
SAMM50-204	ENST00000493161	MEIKIN	A0A087WXM9	373 aa		10.72	□□□□□ -0.69
SAMM50-204	ENST00000493161	GPR12	P47775	334 aa		10.72	□□□□□ -0.69
SAMM50-204	ENST00000493161	REG1B	P48304	166 aa		10.72	□□□□□ -0.69
SAMM50-204	ENST00000493161	FLOT2	Q14254	428 aa		10.72	□□□□□ -0.69
SAMM50-204	ENST00000493161	KIR2DS1	Q14954	304 aa		10.72	□□□□□ -0.69
SAMM50-204	ENST00000493161	PNLIPRP3	Q17RR3	467 aa		10.72	□□□□□ -0.69
SAMM50-204	ENST00000493161	C9orf66	Q5T8R8	295 aa		10.72	□□□□□ -0.69
SAMM50-204	ENST00000493161	TMEM244	Q5VVB8	128 aa		10.72	□□□□□ -0.69
SAMM50-204	ENST00000493161	FAM53A	Q6NSI3	398 aa	Predicted RBP	10.72	□□□□□ -0.69
SAMM50-204	ENST00000493161	CHST4	Q8NCG5	386 aa		10.72	□□□□□ -0.69
SAMM50-204	ENST00000493161	OR51T1	Q8NGJ9	327 aa		10.72	□□□□□ -0.69
SAMM50-204	ENST00000493161	OR8U1	Q8NH10	309 aa		10.72	□□□□□ -0.69
SAMM50-204	ENST00000493161	PLPPR1	Q8TBJ4	325 aa		10.72	□□□□□ -0.69
SAMM50-204	ENST00000493161	SPSB1	Q96BD6	273 aa		10.72	□□□□□ -0.69
SAMM50-204	ENST00000493161	EAF1	Q96JC9	268 aa	Predicted RBP	10.72	□□□□□ -0.69
SAMM50-204	ENST00000493161	MBOAT4	Q96T53	435 aa		10.72	□□□□□ -0.69
SAMM50-204	ENST00000493161	ZNF581	Q9P0T4	197 aa		10.72	□□□□□ -0.69
SAMM50-204	ENST00000493161	TRAV24	A0A0B4J272	114 aa		10.71	□□□□□ -0.69
SAMM50-204	ENST00000493161	NCBP2L	A6PVI3	153 aa	Known RBP	10.71	□□□□□ -0.69
SAMM50-204	ENST00000493161	NPIPB11	E5RHQ5	1161 aa		10.71	□□□□□ -0.69
SAMM50-204	ENST00000493161		H0YJX3	145 aa		10.71	□□□□□ -0.69
SAMM50-204	ENST00000493161	FAM107A	O95990	144 aa		10.71	□□□□□ -0.69
SAMM50-204	ENST00000493161	IL1A	P01583	271 aa		10.71	□□□□□ -0.69
SAMM50-204	ENST00000493161	HOXB6	P17509	224 aa	Known RBP	10.71	□□□□□ -0.69
SAMM50-204	ENST00000493161	SSTR5	P35346	364 aa		10.71	□□□□□ -0.69
SAMM50-204	ENST00000493161	RAB7A	P51149	207 aa		10.71	□□□□□ -0.69
SAMM50-204	ENST00000493161	GP2	P55259	537 aa	Known RBP	10.71	□□□□□ -0.69
SAMM50-204	ENST00000493161	ZP1	P60852	638 aa		10.71	□□□□□ -0.69
SAMM50-204	ENST00000493161	GPR50	Q13585	617 aa		10.71	□□□□□ -0.69
SAMM50-204	ENST00000493161	EBI3	Q14213	229 aa		10.71	□□□□□ -0.69
SAMM50-204	ENST00000493161	ZNF260	Q3ZCT1	412 aa		10.71	□□□□□ -0.69
SAMM50-204	ENST00000493161	KDM4D	Q6B0I6	523 aa		10.71	□□□□□ -0.69
SAMM50-204	ENST00000493161	MOB3B	Q86TA1	216 aa		10.71	□□□□□ -0.69
SAMM50-204	ENST00000493161	SBSPON	Q8IVN8	264 aa		10.71	□□□□□ -0.69
SAMM50-204	ENST00000493161	SAXO1	Q8IYX7	474 aa		10.71	□□□□□ -0.69
SAMM50-204	ENST00000493161	OR8H3	Q8N146	312 aa		10.71	□□□□□ -0.69
SAMM50-204	ENST00000493161		Q8N6K4	173 aa		10.71	□□□□□ -0.69
SAMM50-204	ENST00000493161		Q8N9W7	124 aa		10.71	□□□□□ -0.69
SAMM50-204	ENST00000493161	MRGPRD	Q8TDS7	321 aa		10.71	□□□□□ -0.69
SAMM50-204	ENST00000493161	NR1H4	Q96RI1	486 aa	Predicted RBP	10.71	□□□□□ -0.69
SAMM50-204	ENST00000493161	LINC00574	Q9H8X3	128 aa		10.71	□□□□□ -0.69
SAMM50-204	ENST00000493161	MYRF	Q9Y2G1	1151 aa		10.71	□□□□□ -0.69
SAMM50-204	ENST00000493161	ZNF256	Q9Y2P7	627 aa	Predicted RBP	10.71	□□□□□ -0.69
SAMM50-204	ENST00000493161	IGHV1-3	A0A0C4DH29	117 aa		10.7	□□□□□ -0.7
SAMM50-204	ENST00000493161	AP4M1	O00189	453 aa		10.7	□□□□□ -0.7
SAMM50-204	ENST00000493161	HSD17B6	O14756	317 aa		10.7	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms