RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 COMMD6Q7Z4G1 85 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 LSM10Q969L4 123 aaKnown RBP4.84□□□□□ -1.63
USF3-202ENST00000478658 LINC00052Q96N35 136 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 NTMT1Q9BV86 223 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 TXNRD2Q9NNW7 524 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 KIAA1217Q5T5P2 1943 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 PHLPP1O60346 1717 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 E9PQ18 207 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 UFM1P61960 85 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 GLIPR1L1Q6UWM5 242 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 EEF1AKMT3Q96AZ1 226 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 SDF2L1Q9HCN8 221 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 ZNF107Q9UII5 783 aaPredicted RBP4.84□□□□□ -1.63
USF3-202ENST00000478658 TMEM129A0AVI4 362 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 TDGF1P3P51864 188 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 MPV17LQ2QL34 196 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 FAM159AQ6UWV7 190 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 ZNF761Q86XN6 746 aaPredicted RBP4.84□□□□□ -1.63
USF3-202ENST00000478658 P2RX4Q99571 388 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 LAMTOR3Q9UHA4 124 aa4.84□□□□□ -1.63
USF3-202ENST00000478658 DISP1Q96F81 1524 aa4.84□□□□□ -1.64
USF3-202ENST00000478658 FITM1A5D6W6 292 aa4.84□□□□□ -1.64
USF3-202ENST00000478658 PLPP1O14494 284 aa4.84□□□□□ -1.64
USF3-202ENST00000478658 TOMM40O96008 361 aa4.84□□□□□ -1.64
USF3-202ENST00000478658 CST4P01036 141 aa4.84□□□□□ -1.64
USF3-202ENST00000478658 ID2Q02363 134 aa4.84□□□□□ -1.64
USF3-202ENST00000478658 GGTA1PQ4G0N0 100 aa4.84□□□□□ -1.64
USF3-202ENST00000478658 MORN1Q5T089 497 aa4.84□□□□□ -1.64
USF3-202ENST00000478658 FAHD2BQ6P2I3 314 aaPredicted RBP4.84□□□□□ -1.64
USF3-202ENST00000478658 ZNF384Q8TF68 577 aa4.84□□□□□ -1.64
USF3-202ENST00000478658 FAM222BQ8WU58 562 aa4.84□□□□□ -1.64
USF3-202ENST00000478658 RGPD3A6NKT7 1758 aaPredicted RBP4.84□□□□□ -1.64
USF3-202ENST00000478658 TEX48A0A1B0GUV7 120 aa4.84□□□□□ -1.64
USF3-202ENST00000478658 ETHE1O95571 254 aa4.84□□□□□ -1.64
USF3-202ENST00000478658 FCGR2BP31994 310 aaPredicted RBP4.84□□□□□ -1.64
USF3-202ENST00000478658 BTCP35070 178 aa4.84□□□□□ -1.64
USF3-202ENST00000478658 GUCA2BQ16661 112 aa4.84□□□□□ -1.64
USF3-202ENST00000478658 LY6G5CQ5SRR4 150 aa4.84□□□□□ -1.64
USF3-202ENST00000478658 SLC25A19Q9HC21 320 aa4.84□□□□□ -1.64
USF3-202ENST00000478658 A0A1B0GTH9 108 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 DAOP14920 347 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 PMELP40967 661 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 CLDN2P57739 230 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 SLC38A11Q08AI6 406 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 LAMA4Q16363 1823 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 SPRED3Q2MJR0 410 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 C1orf140Q5VVS0 124 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 ASPHD2Q6ICH7 369 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 WDFY1Q8IWB7 410 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 CYB561D1Q8N8Q1 229 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 OR8A1Q8NGG7 326 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 TMEM158Q8WZ71 300 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 NPCDR1Q9BY65 106 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 TINAGL1Q9GZM7 467 aaPredicted RBP4.83□□□□□ -1.64
USF3-202ENST00000478658 A4GALTQ9NPC4 353 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 PLSCR3Q9NRY6 295 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 GPR27Q9NS67 375 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 GALPQ9UBC7 116 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 INSIG2Q9Y5U4 225 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 CD160O95971 181 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 CD8AP01732 235 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 C1orf61Q13536 156 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 NRN1LQ496H8 165 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 SFTA2Q6UW10 78 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 SLC7A5P1Q8MH63 180 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 C10orf111Q8N326 155 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 ZNF511Q8NB15 262 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 MBNL1Q9NR56 388 aaKnown RBP4.83□□□□□ -1.64
USF3-202ENST00000478658 OPN4Q9UHM6 478 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 ATXN7L1Q9ULK2 861 aaPredicted RBP4.83□□□□□ -1.64
USF3-202ENST00000478658 RNF114Q9Y508 228 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 C7orf72A4D263 438 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 DLL1O00548 723 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 HLA-DRB1P01911 266 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 GZMHP20718 246 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 RIPPLY3P57055 190 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 PYCR3Q53H96 274 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 SPRYD7Q5W111 196 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 TMEM215Q68D42 235 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 ETFBKMTQ8IXQ9 262 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 ZNF418Q8TF45 676 aaPredicted RBP4.83□□□□□ -1.64
USF3-202ENST00000478658 PRADC1Q9BSG0 188 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 LAT2Q9GZY6 243 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 GPR132Q9UNW8 380 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 MPC1Q9Y5U8 109 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 TPRP12270 2363 aaKnown RBP4.83□□□□□ -1.64
USF3-202ENST00000478658 ARFGEF2Q9Y6D5 1785 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 BCL2L11O43521 198 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 PLAUP00749 431 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 M6PRP20645 277 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 FUT3P21217 361 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 IRF3Q14653 427 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 MAJINQ3KP22 176 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 FBXO46Q6PJ61 603 aaPredicted RBP4.83□□□□□ -1.64
USF3-202ENST00000478658 SUSD1Q6UWL2 747 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 C4orf32Q8N8J7 132 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 OR4X2Q8NGF9 303 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 OR4X1Q8NH49 305 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 JPT2Q9H910 190 aa4.83□□□□□ -1.64
USF3-202ENST00000478658 IL20Q9NYY1 176 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms