RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 MPZL1O95297 269 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 PTHP01270 115 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 APOC1P02654 83 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 KRT8P05787 483 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 TACSTD2P09758 323 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 H2BFMP0C1H6 154 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 SBK2P0C263 348 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 PIPP12273 146 aaPredicted RBP2.95□□□□□ -1.94
UBR3-209ENST00000477461 ZNF32P17041 273 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 PSMB1P20618 241 aaKnown RBP2.95□□□□□ -1.94
UBR3-209ENST00000477461 COX5AP20674 150 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 SLC2A5P22732 501 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 IGHV1-2P23083 117 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 DCKP27707 260 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 HSD11B1P28845 292 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 APLNRP35414 380 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 PEX19P40855 299 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 KRTAP10-1P60331 282 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 GABARAPL2P60520 117 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 LYZP61626 148 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 ACTA2P62736 377 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 ACTG2P63267 376 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 ST3GAL4Q11206 333 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 ECH1Q13011 328 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 AQP6Q13520 282 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 GGTLC2Q14390 218 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 RAB35Q15286 201 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 TSC22D1Q15714 1073 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 GABRA6Q16445 453 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 GSG1Q2KHT4 349 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 ANKRD55Q3KP44 614 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 HIKESHIQ53FT3 197 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 NHLRC3Q5JS37 347 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 TEX30Q5JUR7 227 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 LINC01590Q5TEZ4 76 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 FAM27BQ5VT28 67 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 OTPQ5XKR4 325 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 WDR25Q64LD2 544 aaPredicted RBP2.95□□□□□ -1.94
UBR3-209ENST00000477461 LEMD1Q68G75 181 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 ZNF544Q6NX49 715 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 ZNF322Q6U7Q0 402 aaPredicted RBP2.95□□□□□ -1.94
UBR3-209ENST00000477461 B3GLCTQ6Y288 498 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 TMPRSS11AQ6ZMR5 421 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 PLEKHG7Q6ZR37 379 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 DCXRQ7Z4W1 244 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 WDFY1Q8IWB7 410 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 STHQ8IWL8 128 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 SKA3Q8IX90 412 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 GABRG1Q8N1C3 465 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 C17orf78Q8N4C9 275 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 ACBD7Q8N6N7 88 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 YIPF7Q8N8F6 280 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 SAMD12Q8N8I0 201 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 RELL2Q8NC24 303 aaPredicted RBP2.95□□□□□ -1.94
UBR3-209ENST00000477461 OR4F15Q8NGB8 312 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 OR52I1Q8NGK6 324 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 OR2T27Q8NH04 317 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 OR4F5Q8NH21 305 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 LILRB4Q8NHJ6 448 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 OTOSQ8NHW6 89 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 ASB17Q8WXJ9 295 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 RNASE6Q93091 150 aaKnown RBP2.95□□□□□ -1.94
UBR3-209ENST00000477461 FAM46BQ96A09 425 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 TBX5Q99593 518 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 SH3GL3Q99963 347 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 KCNS3Q9BQ31 491 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 MED18Q9BUE0 208 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 ZNF416Q9BWM5 594 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 MROQ9BYG7 248 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 TTTY10Q9BZA0 68 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 ACTR6Q9GZN1 396 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 HDHD2Q9H0R4 259 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 CXXC4Q9H2H0 198 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 LIME1Q9H400 295 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 C1orf198Q9H425 327 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 ADGRL4Q9HBW9 690 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 FGF20Q9NP95 211 aaPredicted RBP2.95□□□□□ -1.94
UBR3-209ENST00000477461 SLC17A5Q9NRA2 495 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 INPP5EQ9NRR6 644 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 CENPMQ9NSP4 180 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 DDX28Q9NUL7 540 aaKnown RBP2.95□□□□□ -1.94
UBR3-209ENST00000477461 MRPL22Q9NWU5 206 aaKnown RBP2.95□□□□□ -1.94
UBR3-209ENST00000477461 UBAP1Q9NZ09 502 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 CNOT2Q9NZN8 540 aaKnown RBP2.95□□□□□ -1.94
UBR3-209ENST00000477461 DIMT1Q9UNQ2 313 aaKnown RBP2.95□□□□□ -1.94
UBR3-209ENST00000477461 ERGIC3Q9Y282 383 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 EXOSC1Q9Y3B2 195 aaKnown RBP2.95□□□□□ -1.94
UBR3-209ENST00000477461 FBXO7Q9Y3I1 522 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 UGT2A1Q9Y4X1 527 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 TIMM10BQ9Y5J6 103 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 FAM208BQ5VWN6 2430 aa2.95□□□□□ -1.94
UBR3-209ENST00000477461 HIVEP3Q5T1R4 2406 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 EPG5Q9HCE0 2579 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 A0A087WXM4 84 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 ARPC4-TTLL3A0A0A6YYG9 625 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 TEX48A0A1B0GUV7 120 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 A0A1W2PQL4 384 aaPredicted RBP2.94□□□□□ -1.94
UBR3-209ENST00000477461 OR6C6A6NF89 314 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 TUBAL3A6NHL2 446 aa2.94□□□□□ -1.94
UBR3-209ENST00000477461 METTL15A6NJ78 407 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms