RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 YIF1BQ5BJH7 314 aa12.52□□□□□ -0.41
SRRT-209ENST00000474896 MINOS1Q5TGZ0 78 aa12.52□□□□□ -0.41
SRRT-209ENST00000474896 LIPKQ5VXJ0 399 aa12.52□□□□□ -0.41
SRRT-209ENST00000474896 OR13C3Q8NGS6 347 aa12.52□□□□□ -0.41
SRRT-209ENST00000474896 OR13C5Q8NGS8 318 aa12.52□□□□□ -0.41
SRRT-209ENST00000474896 NDNFQ8TB73 568 aa12.52□□□□□ -0.41
SRRT-209ENST00000474896 TRMT10AQ8TBZ6 339 aaKnown RBP12.52□□□□□ -0.41
SRRT-209ENST00000474896 GPR148Q8TDV2 347 aa12.52□□□□□ -0.41
SRRT-209ENST00000474896 TSEN15Q8WW01 171 aaKnown RBP12.52□□□□□ -0.41
SRRT-209ENST00000474896 ZNF714Q96N38 554 aa12.52□□□□□ -0.41
SRRT-209ENST00000474896 PKIBQ9C010 78 aa12.52□□□□□ -0.41
SRRT-209ENST00000474896 DHDHQ9UQ10 334 aa12.52□□□□□ -0.41
SRRT-209ENST00000474896 MINOS1-NBL1R4GNA1 71 aa12.52□□□□□ -0.41
SRRT-209ENST00000474896 DNAH3Q8TD57 4116 aa12.52□□□□□ -0.41
SRRT-209ENST00000474896 FAM230AA0A1W2PPH8 454 aa12.51□□□□□ -0.41
SRRT-209ENST00000474896 FAM90A22PA8MWA6 464 aa12.51□□□□□ -0.41
SRRT-209ENST00000474896 F8VVB4 439 aa12.51□□□□□ -0.41
SRRT-209ENST00000474896 F8VWA3 439 aa12.51□□□□□ -0.41
SRRT-209ENST00000474896 SOX2P48431 317 aa12.51□□□□□ -0.41
SRRT-209ENST00000474896 RPS11P62280 158 aaKnown RBP eCLIP12.51□□□□□ -0.41
SRRT-209ENST00000474896 MEF2CQ06413 473 aaPredicted RBP12.51□□□□□ -0.41
SRRT-209ENST00000474896 EDDM3AQ14507 147 aa12.51□□□□□ -0.41
SRRT-209ENST00000474896 TCTEX1D4Q5JR98 221 aa12.51□□□□□ -0.41
SRRT-209ENST00000474896 OR8H2Q8N162 312 aa12.51□□□□□ -0.41
SRRT-209ENST00000474896 FGGYQ96C11 551 aa12.51□□□□□ -0.41
SRRT-209ENST00000474896 C10orf35Q96D05 121 aa12.51□□□□□ -0.41
SRRT-209ENST00000474896 ADAT3Q96EY9 351 aaPredicted RBP12.51□□□□□ -0.41
SRRT-209ENST00000474896 SNX22Q96L94 193 aa12.51□□□□□ -0.41
SRRT-209ENST00000474896 TMED9Q9BVK6 235 aa12.51□□□□□ -0.41
SRRT-209ENST00000474896 VCX3AQ9NNX9 186 aa12.51□□□□□ -0.41
SRRT-209ENST00000474896 MTCH1Q9NZJ7 389 aa12.51□□□□□ -0.41
SRRT-209ENST00000474896 IGHV2-26A0A0B4J1V2 119 aa12.5□□□□□ -0.41
SRRT-209ENST00000474896 TRBV5-5A0A0J9YX44 114 aa12.5□□□□□ -0.41
SRRT-209ENST00000474896 hADV38S2A0JD32 116 aa12.5□□□□□ -0.41
SRRT-209ENST00000474896 TMEM82A0PJX8 343 aa12.5□□□□□ -0.41
SRRT-209ENST00000474896 MAGEA13PA6NCF6 341 aa12.5□□□□□ -0.41
SRRT-209ENST00000474896 PF4P02776 101 aa12.5□□□□□ -0.41
SRRT-209ENST00000474896 OCM2P0CE71 109 aa12.5□□□□□ -0.41
SRRT-209ENST00000474896 ZNF20P17024 532 aa12.5□□□□□ -0.41
SRRT-209ENST00000474896 AZGP1P25311 298 aaKnown RBP12.5□□□□□ -0.41
SRRT-209ENST00000474896 KRTAP10-11P60412 298 aa12.5□□□□□ -0.41
SRRT-209ENST00000474896 SSX1Q16384 188 aa12.5□□□□□ -0.41
SRRT-209ENST00000474896 SYT6Q5T7P8 510 aaPredicted RBP12.5□□□□□ -0.41
SRRT-209ENST00000474896 C11orf87Q6NUJ2 197 aa12.5□□□□□ -0.41
SRRT-209ENST00000474896 TCF23Q7RTU1 214 aa12.5□□□□□ -0.41
SRRT-209ENST00000474896 TPRX1Q8N7U7 411 aa12.5□□□□□ -0.41
SRRT-209ENST00000474896 MUL1Q969V5 352 aa12.5□□□□□ -0.41
SRRT-209ENST00000474896 SLAMF9Q96A28 289 aa12.5□□□□□ -0.41
SRRT-209ENST00000474896 CEP19Q96LK0 163 aa12.5□□□□□ -0.41
SRRT-209ENST00000474896 CHST5Q9GZS9 411 aa12.5□□□□□ -0.41
SRRT-209ENST00000474896 SLC7A11Q9UPY5 501 aa12.5□□□□□ -0.41
SRRT-209ENST00000474896 TSSC4Q9Y5U2 329 aaPredicted RBP12.5□□□□□ -0.41
SRRT-209ENST00000474896 SESN1Q9Y6P5 492 aa12.5□□□□□ -0.41
SRRT-209ENST00000474896 WI2-2373I1.2A0A1W2PRP0 233 aa12.49□□□□□ -0.41
SRRT-209ENST00000474896 CD2P06729 351 aa12.49□□□□□ -0.41
SRRT-209ENST00000474896 VSIG8P0DPA2 414 aa12.49□□□□□ -0.41
SRRT-209ENST00000474896 CD24P25063 80 aa12.49□□□□□ -0.41
SRRT-209ENST00000474896 GP2P55259 537 aaKnown RBP12.49□□□□□ -0.41
SRRT-209ENST00000474896 RPS25P62851 125 aaKnown RBP12.49□□□□□ -0.41
SRRT-209ENST00000474896 Q499Y3 187 aa12.49□□□□□ -0.41
SRRT-209ENST00000474896 MS4A15Q8N5U1 240 aa12.49□□□□□ -0.41
SRRT-209ENST00000474896 OR52N4Q8NGI2 321 aa12.49□□□□□ -0.41
SRRT-209ENST00000474896 PP6455Q8WZ26 134 aa12.49□□□□□ -0.41
SRRT-209ENST00000474896 TMEM106AQ96A25 262 aa12.49□□□□□ -0.41
SRRT-209ENST00000474896 RCC1LQ96I51 464 aaKnown RBP12.49□□□□□ -0.41
SRRT-209ENST00000474896 OR14A2Q96R54 314 aa12.49□□□□□ -0.41
SRRT-209ENST00000474896 CLEC7AQ9BXN2 247 aa12.49□□□□□ -0.41
SRRT-209ENST00000474896 TMEM133Q9H2Q1 129 aa12.49□□□□□ -0.41
SRRT-209ENST00000474896 IGKV1-27A0A075B6S5 117 aa12.48□□□□□ -0.41
SRRT-209ENST00000474896 CCRL2O00421 344 aa12.48□□□□□ -0.41
SRRT-209ENST00000474896 GATBO75879 557 aaKnown RBP12.48□□□□□ -0.41
SRRT-209ENST00000474896 MMP23AO75900 390 aa12.48□□□□□ -0.41
SRRT-209ENST00000474896 LPLP06858 475 aa12.48□□□□□ -0.41
SRRT-209ENST00000474896 HTR1DP28221 377 aa12.48□□□□□ -0.41
SRRT-209ENST00000474896 UBE2V2Q15819 145 aa12.48□□□□□ -0.41
SRRT-209ENST00000474896 GRK1Q15835 563 aa12.48□□□□□ -0.41
SRRT-209ENST00000474896 UTS2BQ765I0 119 aa12.48□□□□□ -0.41
SRRT-209ENST00000474896 PARP16Q8N5Y8 322 aa12.48□□□□□ -0.41
SRRT-209ENST00000474896 TMEM203Q969S6 136 aa12.48□□□□□ -0.41
SRRT-209ENST00000474896 MRPS26Q9BYN8 205 aaKnown RBP12.48□□□□□ -0.41
SRRT-209ENST00000474896 CHST6Q9GZX3 395 aa12.48□□□□□ -0.41
SRRT-209ENST00000474896 NDUFB11Q9NX14 153 aa12.48□□□□□ -0.41
SRRT-209ENST00000474896 LINC00312Q9Y6C7 94 aa12.48□□□□□ -0.41
SRRT-209ENST00000474896 TRBV5-7A0A0A0MS05 114 aa12.47□□□□□ -0.41
SRRT-209ENST00000474896 SC5DO75845 299 aa12.47□□□□□ -0.41
SRRT-209ENST00000474896 HAND1O96004 215 aa12.47□□□□□ -0.41
SRRT-209ENST00000474896 SERPINA3P01011 423 aa12.47□□□□□ -0.41
SRRT-209ENST00000474896 GABRR1P24046 479 aa12.47□□□□□ -0.41
SRRT-209ENST00000474896 PSMA1P25786 263 aaKnown RBP12.47□□□□□ -0.41
SRRT-209ENST00000474896 FUT6P51993 359 aa12.47□□□□□ -0.41
SRRT-209ENST00000474896 INSL4Q14641 139 aa12.47□□□□□ -0.41
SRRT-209ENST00000474896 TRAM1Q15629 374 aa12.47□□□□□ -0.41
SRRT-209ENST00000474896 ABCA11PQ4W5N1 156 aa12.47□□□□□ -0.41
SRRT-209ENST00000474896 ACSM3Q53FZ2 586 aa12.47□□□□□ -0.41
SRRT-209ENST00000474896 C10orf99Q6UWK7 81 aa12.47□□□□□ -0.41
SRRT-209ENST00000474896 SLC25A26Q70HW3 274 aa12.47□□□□□ -0.41
SRRT-209ENST00000474896 C16orf82Q7Z2V1 217 aa12.47□□□□□ -0.41
SRRT-209ENST00000474896 SERPINA12Q8IW75 414 aa12.47□□□□□ -0.41
SRRT-209ENST00000474896 ABHD12Q8N2K0 398 aa12.47□□□□□ -0.41
SRRT-209ENST00000474896 OR5D14Q8NGL3 314 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms