RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 TAS2R31P59538 309 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 SNRPFP62306 86 aaKnown RBP2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 ARG2P78540 354 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 SEMG2Q02383 582 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 MXD1Q05195 221 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 CDC20Q12834 499 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 SRSF6Q13247 344 aaKnown RBP2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 SLC9A3R2Q15599 337 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 TRIQKQ629K1 86 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 DNM1P34Q6PK57 102 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 PHF13Q86YI8 300 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 GID4Q8IVV7 300 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 WDFY1Q8IWB7 410 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 IFT20Q8IY31 132 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 ATPAF2Q8N5M1 289 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 LRRC52Q8N7C0 313 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 CCNYL1Q8N7R7 359 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR4K17Q8NGC6 315 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR2D3Q8NGH3 330 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR52E2Q8NGJ4 325 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR5M1Q8NGP8 315 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR6X1Q8NH79 312 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 ACTRT1Q8TDG2 376 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 NAT14Q8WUY8 206 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 TMEM234Q8WY98 164 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 TMEM208Q9BTX3 173 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 C6orf62Q9GZU0 229 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 ASB7Q9H672 318 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 TMEM27Q9HBJ8 222 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 PARVAQ9NVD7 372 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 SLC25A37Q9NYZ2 338 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 ZNF629Q9UEG4 869 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 PCYOX1Q9UHG3 505 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 CES1P1Q9UKY3 287 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 MRPS18BQ9Y676 258 aaKnown RBP2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 DENND4AQ7Z401 1863 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 TRPM6Q9BX84 2022 aa2.75□□□□□ -1.97
HMGB1P25-201ENST00000468402 CEP192Q8TEP8 1941 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 A0A0B4J2E0 115 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 A0A0G2JN53 185 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 A0A1B0GX12 115 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 DAPL1A0PJW8 107 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 ZFP92A6NM28 416 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 SIGLEC16A6NMB1 481 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 KRTAP16-1A8MUX0 517 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 BTNL10A8MVZ5 291 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 F5H5T6 163 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 PSMD12O00232 456 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 KPNA3O00505 521 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 GABRPO00591 440 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 NME4O00746 187 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 TCAPO15273 167 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 GLSO94925 669 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 VAMP5O95183 116 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 C6orf47O95873 294 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 TYMSP04818 313 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 FABP3P05413 133 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 BCHEP06276 602 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 PAEPP09466 180 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 TACSTD2P09758 323 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 ATF6P18850 670 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 WARSP23381 471 aaKnown RBP2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 ZBTB25P24278 435 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 SDC4P31431 198 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 RPL22P35268 128 aaKnown RBP2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 HRH1P35367 487 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 CDKN2BP42772 138 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 DLX6P56179 175 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 TAS2R39P59534 338 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 MAXP61244 160 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 GNGT1P63211 74 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 MLLT11Q13015 90 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 GUSBP1Q15486 140 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 ZNF726P1Q15940 193 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 MAPK14Q16539 360 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 CLEC12BQ2HXU8 276 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 TTLL9Q3SXZ7 439 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 TMEM176BQ3YBM2 270 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 SPIN4Q56A73 249 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 FAM27D1Q5T7N8 215 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 LCE1AQ5T7P2 110 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 METTL21CQ5VZV1 264 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR2T5Q6IEZ7 315 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 C3orf33Q6P1S2 294 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 MED27Q6P2C8 311 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 LRRN1Q6UXK5 716 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 GTSCR1Q86UQ5 136 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 KRTAP7-1Q8IUC3 87 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 ENTHD1Q8IYW4 607 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 ZNF485Q8NCK3 441 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR2L5Q8NG80 312 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR10G9Q8NGN4 311 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR2T29Q8NH02 315 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 OR2AE1Q8NHA4 323 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 NEK7Q8TDX7 302 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 C7orf33Q8WU49 177 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 FAM222BQ8WU58 562 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 RAB8BQ92930 207 aa2.74□□□□□ -1.97
HMGB1P25-201ENST00000468402 SGTBQ96EQ0 304 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms