RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 ABCB10Q9NRK6 738 aa13.8□□□□□ -0.2
SSBP1-207ENST00000468267 FKBP14Q9NWM8 211 aa13.8□□□□□ -0.2
SSBP1-207ENST00000468267 IL36GQ9NZH8 169 aa13.8□□□□□ -0.2
SSBP1-207ENST00000468267 ING4Q9UNL4 249 aa13.8□□□□□ -0.2
SSBP1-207ENST00000468267 TRBV5-7A0A0A0MS05 114 aa13.79□□□□□ -0.2
SSBP1-207ENST00000468267 A6NDX4 124 aa13.79□□□□□ -0.2
SSBP1-207ENST00000468267 TIMM23O14925 209 aa13.79□□□□□ -0.2
SSBP1-207ENST00000468267 DYNLT3P51808 116 aa13.79□□□□□ -0.2
SSBP1-207ENST00000468267 SLC34A1Q06495 639 aa13.79□□□□□ -0.2
SSBP1-207ENST00000468267 RIPK1Q13546 671 aa13.79□□□□□ -0.2
SSBP1-207ENST00000468267 PIGYQ3MUY2 71 aa13.79□□□□□ -0.2
SSBP1-207ENST00000468267 RTN4RL2Q86UN3 420 aa13.79□□□□□ -0.2
SSBP1-207ENST00000468267 ABHD12Q8N2K0 398 aa13.79□□□□□ -0.2
SSBP1-207ENST00000468267 NDNFQ8TB73 568 aa13.79□□□□□ -0.2
SSBP1-207ENST00000468267 METTL9Q9H1A3 318 aa13.79□□□□□ -0.2
SSBP1-207ENST00000468267 ING3Q9NXR8 418 aa13.79□□□□□ -0.2
SSBP1-207ENST00000468267 OR6C3Q9NZP0 311 aa13.79□□□□□ -0.2
SSBP1-207ENST00000468267 CKLFQ9UBR5 152 aa13.79□□□□□ -0.2
SSBP1-207ENST00000468267 TCF19Q9Y242 345 aa13.79□□□□□ -0.2
SSBP1-207ENST00000468267 HILPDAQ9Y5L2 63 aa13.79□□□□□ -0.2
SSBP1-207ENST00000468267 ZNF729A6NN14 1252 aaPredicted RBP13.78□□□□□ -0.2
SSBP1-207ENST00000468267 HSPB6O14558 160 aa13.78□□□□□ -0.2
SSBP1-207ENST00000468267 CD1AP06126 327 aa13.78□□□□□ -0.2
SSBP1-207ENST00000468267 CGB3P0DN86 165 aa13.78□□□□□ -0.2
SSBP1-207ENST00000468267 CGB7P0DN87 165 aa13.78□□□□□ -0.2
SSBP1-207ENST00000468267 HTR1DP28221 377 aa13.78□□□□□ -0.2
SSBP1-207ENST00000468267 CD34P28906 385 aa13.78□□□□□ -0.2
SSBP1-207ENST00000468267 GDNFP39905 211 aa13.78□□□□□ -0.2
SSBP1-207ENST00000468267 WNT4P56705 351 aa13.78□□□□□ -0.2
SSBP1-207ENST00000468267 BDH1Q02338 343 aa13.78□□□□□ -0.2
SSBP1-207ENST00000468267 PAX5Q02548 391 aa13.78□□□□□ -0.2
SSBP1-207ENST00000468267 C17orf58Q2M2W7 97 aa13.78□□□□□ -0.2
SSBP1-207ENST00000468267 NHLRC3Q5JS37 347 aa13.78□□□□□ -0.2
SSBP1-207ENST00000468267 CCBE1Q6UXH8 406 aaPredicted RBP13.78□□□□□ -0.2
SSBP1-207ENST00000468267 NANOGP1Q8N7R0 232 aa13.78□□□□□ -0.2
SSBP1-207ENST00000468267 OR4D6Q8NGJ1 314 aa13.78□□□□□ -0.2
SSBP1-207ENST00000468267 OR4P4Q8NGL7 312 aa13.78□□□□□ -0.2
SSBP1-207ENST00000468267 ZNF184Q99676 751 aaPredicted RBP13.78□□□□□ -0.2
SSBP1-207ENST00000468267 NPFFR1Q9GZQ6 430 aa13.78□□□□□ -0.2
SSBP1-207ENST00000468267 IFT22Q9H7X7 185 aa13.78□□□□□ -0.2
SSBP1-207ENST00000468267 PAK1IP1Q9NWT1 392 aaPredicted RBP13.78□□□□□ -0.2
SSBP1-207ENST00000468267 ST3GAL6Q9Y274 331 aa13.78□□□□□ -0.2
SSBP1-207ENST00000468267 SIGLEC9Q9Y336 463 aa13.78□□□□□ -0.2
SSBP1-207ENST00000468267 TRAV8-7A0A075B6U6 113 aa13.77□□□□□ -0.21
SSBP1-207ENST00000468267 KBTBD11-OT1A0A1B0GTJ5 212 aa13.77□□□□□ -0.21
SSBP1-207ENST00000468267 PNMA8CA0A1B0GUJ8 204 aa13.77□□□□□ -0.21
SSBP1-207ENST00000468267 M0QZ24 198 aa13.77□□□□□ -0.21
SSBP1-207ENST00000468267 MYL12BO14950 172 aa13.77□□□□□ -0.21
SSBP1-207ENST00000468267 IGLV1-47P01700 117 aa13.77□□□□□ -0.21
SSBP1-207ENST00000468267 JUNBP17275 347 aaPredicted RBP13.77□□□□□ -0.21
SSBP1-207ENST00000468267 CELP19835 753 aa13.77□□□□□ -0.21
SSBP1-207ENST00000468267 FSTP19883 344 aa13.77□□□□□ -0.21
SSBP1-207ENST00000468267 KCNJ3P48549 501 aa13.77□□□□□ -0.21
SSBP1-207ENST00000468267 EFNB2P52799 333 aa13.77□□□□□ -0.21
SSBP1-207ENST00000468267 RBM11P57052 281 aaKnown RBP13.77□□□□□ -0.21
SSBP1-207ENST00000468267 DOC2BQ14184 412 aa13.77□□□□□ -0.21
SSBP1-207ENST00000468267 RNLSQ5VYX0 342 aa13.77□□□□□ -0.21
SSBP1-207ENST00000468267 C11orf88Q6PI97 169 aa13.77□□□□□ -0.21
SSBP1-207ENST00000468267 OSR2Q8N2R0 312 aa13.77□□□□□ -0.21
SSBP1-207ENST00000468267 DTX3Q8N9I9 347 aa13.77□□□□□ -0.21
SSBP1-207ENST00000468267 ZNF565Q8N9K5 539 aa13.77□□□□□ -0.21
SSBP1-207ENST00000468267 ZNF596Q8TC21 504 aa13.77□□□□□ -0.21
SSBP1-207ENST00000468267 NRG4Q8WWG1 115 aa13.77□□□□□ -0.21
SSBP1-207ENST00000468267 OR14A2Q96R54 314 aa13.77□□□□□ -0.21
SSBP1-207ENST00000468267 S100A13Q99584 98 aa13.77□□□□□ -0.21
SSBP1-207ENST00000468267 BARHL1Q9BZE3 327 aa13.77□□□□□ -0.21
SSBP1-207ENST00000468267 DPM3Q9P2X0 92 aa13.77□□□□□ -0.21
SSBP1-207ENST00000468267 KIF25Q9UIL4 384 aa13.77□□□□□ -0.21
SSBP1-207ENST00000468267 PITPNC1Q9UKF7 332 aa13.77□□□□□ -0.21
SSBP1-207ENST00000468267 ERGIC3Q9Y282 383 aa13.77□□□□□ -0.21
SSBP1-207ENST00000468267 TET2Q6N021 2002 aaPredicted RBP13.76□□□□□ -0.21
SSBP1-207ENST00000468267 MEIKINA0A087WXM9 373 aa13.76□□□□□ -0.21
SSBP1-207ENST00000468267 A0A087X0M5 115 aa13.76□□□□□ -0.21
SSBP1-207ENST00000468267 A0A1B0GX30 115 aa13.76□□□□□ -0.21
SSBP1-207ENST00000468267 A0A1W2PPK0 400 aa13.76□□□□□ -0.21
SSBP1-207ENST00000468267 MAGEA13PA6NCF6 341 aa13.76□□□□□ -0.21
SSBP1-207ENST00000468267 F2RL2O00254 374 aa13.76□□□□□ -0.21
SSBP1-207ENST00000468267 ZNF780AO75290 641 aaPredicted RBP13.76□□□□□ -0.21
SSBP1-207ENST00000468267 CSTBP04080 98 aaKnown RBP13.76□□□□□ -0.21
SSBP1-207ENST00000468267 C6orf141Q5SZD1 244 aa13.76□□□□□ -0.21
SSBP1-207ENST00000468267 RSBN1Q5VWQ0 802 aaPredicted RBP13.76□□□□□ -0.21
SSBP1-207ENST00000468267 TMEM219Q86XT9 240 aa13.76□□□□□ -0.21
SSBP1-207ENST00000468267 SUMF2Q8NBJ7 301 aa13.76□□□□□ -0.21
SSBP1-207ENST00000468267 OR13A1Q8NGR1 328 aa13.76□□□□□ -0.21
SSBP1-207ENST00000468267 OR2T6Q8NHC8 308 aa13.76□□□□□ -0.21
SSBP1-207ENST00000468267 PLPPR1Q8TBJ4 325 aa13.76□□□□□ -0.21
SSBP1-207ENST00000468267 DERL3Q96Q80 235 aa13.76□□□□□ -0.21
SSBP1-207ENST00000468267 DPCDQ9BVM2 203 aaPredicted RBP13.76□□□□□ -0.21
SSBP1-207ENST00000468267 LINC00574Q9H8X3 128 aa13.76□□□□□ -0.21
SSBP1-207ENST00000468267 ZNF286AQ9HBT8 521 aa13.76□□□□□ -0.21
SSBP1-207ENST00000468267 PCDHB16Q9NRJ7 776 aa13.76□□□□□ -0.21
SSBP1-207ENST00000468267 ZNF581Q9P0T4 197 aa13.76□□□□□ -0.21
SSBP1-207ENST00000468267 FOXJ3Q9UPW0 622 aa13.76□□□□□ -0.21
SSBP1-207ENST00000468267 FAM172BPA6NC97 362 aa13.75□□□□□ -0.21
SSBP1-207ENST00000468267 FAM90A22PA8MWA6 464 aa13.75□□□□□ -0.21
SSBP1-207ENST00000468267 GEMIN2O14893 280 aaKnown RBP13.75□□□□□ -0.21
SSBP1-207ENST00000468267 OR7C1O76099 320 aaPredicted RBP13.75□□□□□ -0.21
SSBP1-207ENST00000468267 CDK1P06493 297 aa13.75□□□□□ -0.21
SSBP1-207ENST00000468267 SERPINA2P20848 420 aa13.75□□□□□ -0.21
SSBP1-207ENST00000468267 GLP1RP43220 463 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 1146.5 ms