RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 CCDC160A6NGH7 325 aa13.21□□□□□ -0.29
GPC1-207ENST00000466624 MCRIP1C9JLW8 97 aa13.21□□□□□ -0.29
GPC1-207ENST00000466624 CA11O75493 328 aa13.21□□□□□ -0.29
GPC1-207ENST00000466624 LY6G6DO95868 133 aa13.21□□□□□ -0.29
GPC1-207ENST00000466624 PAHP00439 452 aa13.21□□□□□ -0.29
GPC1-207ENST00000466624 PPIAL4GP0DN37 164 aa13.21□□□□□ -0.29
GPC1-207ENST00000466624 ZNF182P17025 639 aaPredicted RBP13.21□□□□□ -0.29
GPC1-207ENST00000466624 EFNB2P52799 333 aa13.21□□□□□ -0.29
GPC1-207ENST00000466624 P2RX3P56373 397 aa13.21□□□□□ -0.29
GPC1-207ENST00000466624 RPL31P62899 125 aaKnown RBP13.21□□□□□ -0.29
GPC1-207ENST00000466624 PLA2G7Q13093 441 aa13.21□□□□□ -0.29
GPC1-207ENST00000466624 DCAF12L2Q5VW00 463 aa13.21□□□□□ -0.29
GPC1-207ENST00000466624 CLEC9AQ6UXN8 241 aa13.21□□□□□ -0.29
GPC1-207ENST00000466624 KIR3DL3Q8N743 410 aa13.21□□□□□ -0.29
GPC1-207ENST00000466624 DYNC2LI1Q8TCX1 351 aa13.21□□□□□ -0.29
GPC1-207ENST00000466624 AP3S1Q92572 193 aa13.21□□□□□ -0.29
GPC1-207ENST00000466624 C19orf12Q9NSK7 152 aa13.21□□□□□ -0.29
GPC1-207ENST00000466624 TMEM160Q9NX00 188 aa13.21□□□□□ -0.29
GPC1-207ENST00000466624 CCDC59Q9P031 241 aaKnown RBP13.21□□□□□ -0.29
GPC1-207ENST00000466624 PEX16Q9Y5Y5 336 aa13.21□□□□□ -0.29
GPC1-207ENST00000466624 TLN2Q9Y4G6 2542 aa13.2□□□□□ -0.3
GPC1-207ENST00000466624 A0A1W2PPH5 198 aa13.2□□□□□ -0.3
GPC1-207ENST00000466624 hADV38S2A0JD32 116 aa13.2□□□□□ -0.3
GPC1-207ENST00000466624 BLVRBP30043 206 aaPredicted RBP13.2□□□□□ -0.3
GPC1-207ENST00000466624 SOX6P35712 828 aa13.2□□□□□ -0.3
GPC1-207ENST00000466624 VEGFCP49767 419 aa13.2□□□□□ -0.3
GPC1-207ENST00000466624 EDDM3BP56851 147 aa13.2□□□□□ -0.3
GPC1-207ENST00000466624 PAX8Q06710 450 aa13.2□□□□□ -0.3
GPC1-207ENST00000466624 ATXN7L3Q14CW9 347 aaPredicted RBP13.2□□□□□ -0.3
GPC1-207ENST00000466624 KRBOX4Q5JUW0 171 aa13.2□□□□□ -0.3
GPC1-207ENST00000466624 RSBN1Q5VWQ0 802 aaPredicted RBP13.2□□□□□ -0.3
GPC1-207ENST00000466624 SLC35E4Q6ICL7 350 aa13.2□□□□□ -0.3
GPC1-207ENST00000466624 GAPTQ8N292 157 aa13.2□□□□□ -0.3
GPC1-207ENST00000466624 BPIFB2Q8N4F0 458 aa13.2□□□□□ -0.3
GPC1-207ENST00000466624 OR5H6Q8NGV6 325 aa13.2□□□□□ -0.3
GPC1-207ENST00000466624 COQ2Q96H96 371 aa13.2□□□□□ -0.3
GPC1-207ENST00000466624 CMTM3Q96MX0 182 aa13.2□□□□□ -0.3
GPC1-207ENST00000466624 SMR3AQ99954 134 aa13.2□□□□□ -0.3
GPC1-207ENST00000466624 RHBDL2Q9NX52 303 aa13.2□□□□□ -0.3
GPC1-207ENST00000466624 LINC00312Q9Y6C7 94 aa13.2□□□□□ -0.3
GPC1-207ENST00000466624 A0A1W2PQ09 198 aa13.19□□□□□ -0.3
GPC1-207ENST00000466624 A8MV72 311 aaPredicted RBP13.19□□□□□ -0.3
GPC1-207ENST00000466624 RAB27BO00194 218 aa13.19□□□□□ -0.3
GPC1-207ENST00000466624 HSPB6O14558 160 aa13.19□□□□□ -0.3
GPC1-207ENST00000466624 SOCS1O15524 211 aa13.19□□□□□ -0.3
GPC1-207ENST00000466624 TMEM50BP56557 158 aa13.19□□□□□ -0.3
GPC1-207ENST00000466624 AESQ08117 197 aa13.19□□□□□ -0.3
GPC1-207ENST00000466624 EDDM3AQ14507 147 aa13.19□□□□□ -0.3
GPC1-207ENST00000466624 ARL6IP1Q15041 203 aa13.19□□□□□ -0.3
GPC1-207ENST00000466624 C1orf122Q6ZSJ8 110 aa13.19□□□□□ -0.3
GPC1-207ENST00000466624 OR10R2Q8NGX6 335 aa13.19□□□□□ -0.3
GPC1-207ENST00000466624 PLPPR1Q8TBJ4 325 aa13.19□□□□□ -0.3
GPC1-207ENST00000466624 NEK7Q8TDX7 302 aa13.19□□□□□ -0.3
GPC1-207ENST00000466624 CORO2AQ92828 525 aa13.19□□□□□ -0.3
GPC1-207ENST00000466624 SLC25A38Q96DW6 304 aa13.19□□□□□ -0.3
GPC1-207ENST00000466624 TMPRSS13Q9BYE2 586 aa13.19□□□□□ -0.3
GPC1-207ENST00000466624 ATG5Q9H1Y0 275 aa13.19□□□□□ -0.3
GPC1-207ENST00000466624 ABCG5Q9H222 651 aa13.19□□□□□ -0.3
GPC1-207ENST00000466624 PLEKHJ1Q9NW61 149 aa13.19□□□□□ -0.3
GPC1-207ENST00000466624 KPTNQ9Y664 436 aa13.19□□□□□ -0.3
GPC1-207ENST00000466624 A0A0A6YYH2 397 aa13.18□□□□□ -0.3
GPC1-207ENST00000466624 ODAMA1E959 279 aa13.18□□□□□ -0.3
GPC1-207ENST00000466624 DPPA5A6NC42 116 aa13.18□□□□□ -0.3
GPC1-207ENST00000466624 A6NJ64 397 aa13.18□□□□□ -0.3
GPC1-207ENST00000466624 M0R1W7 72 aa13.18□□□□□ -0.3
GPC1-207ENST00000466624 GLIPR1P48060 266 aa13.18□□□□□ -0.3
GPC1-207ENST00000466624 UBE2NLQ5JXB2 153 aa13.18□□□□□ -0.3
GPC1-207ENST00000466624 NKAPLQ5M9Q1 402 aa13.18□□□□□ -0.3
GPC1-207ENST00000466624 TMEM200BQ69YZ2 307 aa13.18□□□□□ -0.3
GPC1-207ENST00000466624 FAHD2BQ6P2I3 314 aaPredicted RBP13.18□□□□□ -0.3
GPC1-207ENST00000466624 MZT2AQ6P582 158 aa13.18□□□□□ -0.3
GPC1-207ENST00000466624 METAP1DQ6UB28 335 aaPredicted RBP13.18□□□□□ -0.3
GPC1-207ENST00000466624 ZNF497Q6ZNH5 498 aa13.18□□□□□ -0.3
GPC1-207ENST00000466624 Q6ZTK2 550 aa13.18□□□□□ -0.3
GPC1-207ENST00000466624 C6orf201Q7Z4U5 140 aa13.18□□□□□ -0.3
GPC1-207ENST00000466624 CMTM4Q8IZR5 234 aa13.18□□□□□ -0.3
GPC1-207ENST00000466624 FAM185AQ8N0U4 392 aa13.18□□□□□ -0.3
GPC1-207ENST00000466624 TPRX1Q8N7U7 411 aa13.18□□□□□ -0.3
GPC1-207ENST00000466624 OR4M1Q8NGD0 313 aa13.18□□□□□ -0.3
GPC1-207ENST00000466624 DGCR14Q96DF8 476 aaKnown RBP13.18□□□□□ -0.3
GPC1-207ENST00000466624 FAHD2AQ96GK7 314 aa13.18□□□□□ -0.3
GPC1-207ENST00000466624 YAE1D1Q9NRH1 226 aa13.18□□□□□ -0.3
GPC1-207ENST00000466624 ETAA1Q9NY74 926 aa13.18□□□□□ -0.3
GPC1-207ENST00000466624 OR6C3Q9NZP0 311 aa13.18□□□□□ -0.3
GPC1-207ENST00000466624 UBE2J1Q9Y385 318 aaPredicted RBP13.18□□□□□ -0.3
GPC1-207ENST00000466624 KIAA2026Q5HYC2 2103 aa13.18□□□□□ -0.3
GPC1-207ENST00000466624 TRGV10A0A0A0MS01 117 aa13.17□□□□□ -0.3
GPC1-207ENST00000466624 TMEM30CPA0ZSE6 113 aa13.17□□□□□ -0.3
GPC1-207ENST00000466624 POM121CA8CG34 1229 aa13.17□□□□□ -0.3
GPC1-207ENST00000466624 RBP4P02753 201 aa13.17□□□□□ -0.3
GPC1-207ENST00000466624 ZNF273Q14593 569 aa13.17□□□□□ -0.3
GPC1-207ENST00000466624 MOGAT2Q3SYC2 334 aa13.17□□□□□ -0.3
GPC1-207ENST00000466624 PLAC9Q5JTB6 97 aa13.17□□□□□ -0.3
GPC1-207ENST00000466624 BRICD5Q6PL45 260 aa13.17□□□□□ -0.3
GPC1-207ENST00000466624 TCF23Q7RTU1 214 aa13.17□□□□□ -0.3
GPC1-207ENST00000466624 TEX29Q8N6K0 151 aa13.17□□□□□ -0.3
GPC1-207ENST00000466624 RAB3CQ96E17 227 aa13.17□□□□□ -0.3
GPC1-207ENST00000466624 ARHGAP5-AS1Q96IT6 56 aa13.17□□□□□ -0.3
GPC1-207ENST00000466624 SULT4A1Q9BR01 284 aa13.17□□□□□ -0.3
GPC1-207ENST00000466624 PECRQ9BY49 303 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms