RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 UCHL1P09936 223 aa10.5□□□□□ -0.73
COL5A1-206ENST00000465877 HKR1P10072 659 aa10.5□□□□□ -0.73
COL5A1-206ENST00000465877 GTF2F2P13984 249 aa10.5□□□□□ -0.73
COL5A1-206ENST00000465877 PSMA1P25786 263 aaKnown RBP10.5□□□□□ -0.73
COL5A1-206ENST00000465877 GLP1RP43220 463 aa10.5□□□□□ -0.73
COL5A1-206ENST00000465877 KCNJ3P48549 501 aa10.5□□□□□ -0.73
COL5A1-206ENST00000465877 COMPP49747 757 aaPredicted RBP10.5□□□□□ -0.73
COL5A1-206ENST00000465877 GPR176Q14439 515 aa10.5□□□□□ -0.73
COL5A1-206ENST00000465877 TRAM1Q15629 374 aa10.5□□□□□ -0.73
COL5A1-206ENST00000465877 PRAMEF5Q5TYX0 476 aa10.5□□□□□ -0.73
COL5A1-206ENST00000465877 ZNF626Q68DY1 528 aa10.5□□□□□ -0.73
COL5A1-206ENST00000465877 CEACAM19Q7Z692 300 aa10.5□□□□□ -0.73
COL5A1-206ENST00000465877 OR13D1Q8NGV5 346 aa10.5□□□□□ -0.73
COL5A1-206ENST00000465877 UQCC2Q9BRT2 126 aa10.5□□□□□ -0.73
COL5A1-206ENST00000465877 IFT22Q9H7X7 185 aa10.5□□□□□ -0.73
COL5A1-206ENST00000465877 SESN1Q9Y6P5 492 aa10.5□□□□□ -0.73
COL5A1-206ENST00000465877 MRPS14O60783 128 aaKnown RBP10.49□□□□□ -0.73
COL5A1-206ENST00000465877 ARG1P05089 322 aa10.49□□□□□ -0.73
COL5A1-206ENST00000465877 GABRA5P31644 462 aa10.49□□□□□ -0.73
COL5A1-206ENST00000465877 IER3P46695 156 aa10.49□□□□□ -0.73
COL5A1-206ENST00000465877 PAX5Q02548 391 aa10.49□□□□□ -0.73
COL5A1-206ENST00000465877 TAF9Q16594 264 aa10.49□□□□□ -0.73
COL5A1-206ENST00000465877 AWAT1Q58HT5 328 aa10.49□□□□□ -0.73
COL5A1-206ENST00000465877 RSBN1Q5VWQ0 802 aaPredicted RBP10.49□□□□□ -0.73
COL5A1-206ENST00000465877 C16orf87Q6PH81 154 aa10.49□□□□□ -0.73
COL5A1-206ENST00000465877 C12orf54Q6X4T0 127 aa10.49□□□□□ -0.73
COL5A1-206ENST00000465877 TMEM91Q6ZNR0 172 aa10.49□□□□□ -0.73
COL5A1-206ENST00000465877 LRRTM1Q86UE6 522 aa10.49□□□□□ -0.73
COL5A1-206ENST00000465877 SVOPQ8N4V2 548 aa10.49□□□□□ -0.73
COL5A1-206ENST00000465877 SUMF2Q8NBJ7 301 aa10.49□□□□□ -0.73
COL5A1-206ENST00000465877 BEND2Q8NDZ0 799 aa10.49□□□□□ -0.73
COL5A1-206ENST00000465877 PLPPR1Q8TBJ4 325 aa10.49□□□□□ -0.73
COL5A1-206ENST00000465877 C17orf50Q8WW18 174 aa10.49□□□□□ -0.73
COL5A1-206ENST00000465877 DPCDQ9BVM2 203 aaPredicted RBP10.49□□□□□ -0.73
COL5A1-206ENST00000465877 DPAGT1Q9H3H5 408 aa10.49□□□□□ -0.73
COL5A1-206ENST00000465877 PCDHB16Q9NRJ7 776 aa10.49□□□□□ -0.73
COL5A1-206ENST00000465877 NDUFB11Q9NX14 153 aa10.49□□□□□ -0.73
COL5A1-206ENST00000465877 TAS2R3Q9NYW6 316 aa10.49□□□□□ -0.73
COL5A1-206ENST00000465877 OR6C3Q9NZP0 311 aa10.49□□□□□ -0.73
COL5A1-206ENST00000465877 RCC2Q9P258 522 aaKnown RBP10.49□□□□□ -0.73
COL5A1-206ENST00000465877 KIF25Q9UIL4 384 aa10.49□□□□□ -0.73
COL5A1-206ENST00000465877 VPREB3Q9UKI3 123 aa10.49□□□□□ -0.73
COL5A1-206ENST00000465877 IGHV2-26A0A0B4J1V2 119 aa10.48□□□□□ -0.73
COL5A1-206ENST00000465877 MEGF11A6BM72 1044 aa10.48□□□□□ -0.73
COL5A1-206ENST00000465877 BTBD17A6NE02 478 aa10.48□□□□□ -0.73
COL5A1-206ENST00000465877 FAM181BA6NEQ2 426 aa10.48□□□□□ -0.73
COL5A1-206ENST00000465877 ZNF729A6NN14 1252 aaPredicted RBP10.48□□□□□ -0.73
COL5A1-206ENST00000465877 GPR137BO60478 399 aa10.48□□□□□ -0.73
COL5A1-206ENST00000465877 CRTAPO75718 401 aaPredicted RBP10.48□□□□□ -0.73
COL5A1-206ENST00000465877 ARL6IP5O75915 188 aa10.48□□□□□ -0.73
COL5A1-206ENST00000465877 MGMTP16455 207 aa10.48□□□□□ -0.73
COL5A1-206ENST00000465877 CDK2P24941 298 aa10.48□□□□□ -0.73
COL5A1-206ENST00000465877 PAX6P26367 422 aa10.48□□□□□ -0.73
COL5A1-206ENST00000465877 LGALS4P56470 323 aa10.48□□□□□ -0.73
COL5A1-206ENST00000465877 FABP5Q01469 135 aa10.48□□□□□ -0.73
COL5A1-206ENST00000465877 EMX1Q04741 257 aaPredicted RBP10.48□□□□□ -0.73
COL5A1-206ENST00000465877 SSX1Q16384 188 aa10.48□□□□□ -0.73
COL5A1-206ENST00000465877 HEPN1Q6WQI6 88 aa10.48□□□□□ -0.73
COL5A1-206ENST00000465877 TMEM104Q8NE00 496 aa10.48□□□□□ -0.73
COL5A1-206ENST00000465877 OR11H6Q8NGC7 330 aa10.48□□□□□ -0.73
COL5A1-206ENST00000465877 OR13A1Q8NGR1 328 aa10.48□□□□□ -0.73
COL5A1-206ENST00000465877 DYRK2Q92630 601 aa10.48□□□□□ -0.73
COL5A1-206ENST00000465877 TAF15Q92804 592 aaKnown RBP eCLIP10.48□□□□□ -0.73
COL5A1-206ENST00000465877 CORO2AQ92828 525 aa10.48□□□□□ -0.73
COL5A1-206ENST00000465877 FOXRED1Q96CU9 486 aaPredicted RBP10.48□□□□□ -0.73
COL5A1-206ENST00000465877 MRPS24Q96EL2 167 aaKnown RBP10.48□□□□□ -0.73
COL5A1-206ENST00000465877 AJUBAQ96IF1 538 aa10.48□□□□□ -0.73
COL5A1-206ENST00000465877 CLEC7AQ9BXN2 247 aa10.48□□□□□ -0.73
COL5A1-206ENST00000465877 CST11Q9H112 138 aa10.48□□□□□ -0.73
COL5A1-206ENST00000465877 SLITRK2Q9H156 845 aa10.48□□□□□ -0.73
COL5A1-206ENST00000465877 TMEM133Q9H2Q1 129 aa10.48□□□□□ -0.73
COL5A1-206ENST00000465877 TBL2Q9Y4P3 447 aaKnown RBP10.48□□□□□ -0.73
COL5A1-206ENST00000465877 MEIKINA0A087WXM9 373 aa10.47□□□□□ -0.73
COL5A1-206ENST00000465877 FAM172BPA6NC97 362 aa10.47□□□□□ -0.73
COL5A1-206ENST00000465877 MMP23AO75900 390 aa10.47□□□□□ -0.73
COL5A1-206ENST00000465877 UBBP0CG47 229 aa10.47□□□□□ -0.73
COL5A1-206ENST00000465877 SRMP19623 302 aa10.47□□□□□ -0.73
COL5A1-206ENST00000465877 OMGP23515 440 aa10.47□□□□□ -0.73
COL5A1-206ENST00000465877 GDNFP39905 211 aa10.47□□□□□ -0.73
COL5A1-206ENST00000465877 RPL15P61313 204 aaKnown RBP10.47□□□□□ -0.73
COL5A1-206ENST00000465877 LRRC75BQ2VPJ9 315 aa10.47□□□□□ -0.73
COL5A1-206ENST00000465877 ATAD3CQ5T2N8 411 aa10.47□□□□□ -0.73
COL5A1-206ENST00000465877 GLT8D1Q68CQ7 371 aa10.47□□□□□ -0.73
COL5A1-206ENST00000465877 BAIAP2L2Q6UXY1 529 aa10.47□□□□□ -0.73
COL5A1-206ENST00000465877 LHFPL4Q7Z7J7 247 aa10.47□□□□□ -0.73
COL5A1-206ENST00000465877 OR5R1Q8NH85 324 aa10.47□□□□□ -0.73
COL5A1-206ENST00000465877 NEK7Q8TDX7 302 aa10.47□□□□□ -0.73
COL5A1-206ENST00000465877 FAM46BQ96A09 425 aa10.47□□□□□ -0.73
COL5A1-206ENST00000465877 Q96M66 194 aa10.47□□□□□ -0.73
COL5A1-206ENST00000465877 BARHL1Q9BZE3 327 aa10.47□□□□□ -0.73
COL5A1-206ENST00000465877 SELENOIQ9C0D9 397 aa10.47□□□□□ -0.73
COL5A1-206ENST00000465877 KCNK15Q9H427 330 aa10.47□□□□□ -0.73
COL5A1-206ENST00000465877 BANF2Q9H503 90 aa10.47□□□□□ -0.73
COL5A1-206ENST00000465877 SPACA1Q9HBV2 294 aa10.47□□□□□ -0.73
COL5A1-206ENST00000465877 GHRLQ9UBU3 117 aa10.47□□□□□ -0.73
COL5A1-206ENST00000465877 TMEM30CPA0ZSE6 113 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 FAM90A10PA6NDY2 464 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 FAM90A18PA6NE21 464 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 FAM90A16PA6NEW6 464 aa10.46□□□□□ -0.73
COL5A1-206ENST00000465877 FAM90A20PA6NIJ5 464 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms