RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 CACNA1HO95180 2353 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 VPS13AQ96RL7 3174 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 VCANP13611 3396 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 NOTCH3Q9UM47 2321 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 MUC6Q6W4X9 2439 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 IGKV1-9A0A0C4DH69 117 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 MEIS3P1A6NDR6 274 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 NAP1L6A6NFF2 107 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 GAGE10A6NGK3 116 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR5H1A6NKK0 313 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR5B21A6NL26 309 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 CD300LBA8K4G0 201 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 ZNF850A8MQ14 1090 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 TMEM14DPA8MWL7 114 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 M0R1B8 84 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 XRCC3O43542 346 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 SPRY1O43609 319 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 GSTZ1O43708 216 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 TIMM8AO60220 97 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 GMDSO60547 372 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 RBBP9O75884 186 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 WISP2O76076 250 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 TOXO94900 526 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 CECR9P0C854 216 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 GTF2F2P13984 249 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 CBR1P16152 277 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 MGMTP16455 207 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 SELEP16581 610 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 ZNF14P17017 642 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 CPT2P23786 658 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 ACKR3P25106 362 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 GCH1P30793 250 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 CEACAM8P31997 349 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 PRSS3P35030 304 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 VEGFCP49767 419 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 MMP15P51511 669 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 ZNF83P51522 516 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 EFNB2P52799 333 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 GNG2P59768 71 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 RPS23P62266 143 aaKnown RBP3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 MRPS15P82914 257 aaKnown RBP3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 SNTB2Q13425 540 aaKnown RBP3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 ARFRP1Q13795 201 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 GK2Q14410 553 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 GPR176Q14439 515 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 ARL6IP1Q15041 203 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 OXA1LQ15070 435 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 PPA1Q15181 289 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 RSU1Q15404 277 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 UBE2V2Q15819 145 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 RSPO1Q2MKA7 263 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 PCGF3Q3KNV8 242 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 SLC22A6Q4U2R8 563 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 C14orf177Q52M58 125 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 DMRTC1Q5HYR2 192 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 TIMM23BQ5SRD1 257 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 SPATA46Q5T0L3 261 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 TMEM211Q6ICI0 200 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR10K2Q6IF99 312 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 FAM166AQ6J272 317 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 CCBE1Q6UXH8 406 aaPredicted RBP3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 NRARPQ7Z6K4 114 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 TRAPPC6BQ86SZ2 158 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 ZNF584Q8IVC4 421 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 ZNF611Q8N823 705 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 BHLHE23Q8NDY6 225 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR56B1Q8NGI3 324 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR51T1Q8NGJ9 327 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR10K1Q8NGX5 313 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 OR52I2Q8NH67 350 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 KCNG3Q8TAE7 436 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 SLC25A40Q8TBP6 338 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 YIPF5Q969M3 257 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 PTX4Q96A99 478 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 S100PBPQ96BU1 408 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 STARD4Q96DR4 205 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 ABHD1Q96SE0 405 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 MICU1Q9BPX6 476 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 SOSTQ9BQB4 213 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 ADAT1Q9BUB4 502 aaKnown RBP3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 RTL8AQ9BWD3 113 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 C1QTNF6Q9BXI9 259 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 BCL2L14Q9BZR8 327 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 SELENOIQ9C0D9 397 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 ACTR6Q9GZN1 396 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 METTL9Q9H1A3 318 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 BANF2Q9H503 90 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 PCDHB16Q9NRJ7 776 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 NKIRAS2Q9NYR9 191 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 TAS2R8Q9NYW2 309 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 COQ3Q9NZJ6 369 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 NOP16Q9Y3C1 178 aaKnown RBP3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 MPC1Q9Y5U8 109 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 TTC28Q96AY4 2481 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 WDR87Q6ZQQ6 2873 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 DNAJC13O75165 2243 aa3.19□□□□□ -1.9
HMGB3P20-201ENST00000417997 AHCTF1Q8WYP5 2266 aa3.18□□□□□ -1.9
HMGB3P20-201ENST00000417997 KNTC1P50748 2209 aa3.18□□□□□ -1.9
HMGB3P20-201ENST00000417997 IGHV1-18A0A0C4DH31 117 aa3.18□□□□□ -1.9
HMGB3P20-201ENST00000417997 A0A1W2PP11 408 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms