RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 RPS4Y2Q8TD47 263 aa4.36□□□□□ -1.71
SCN3A-203ENST00000409101 BLNKQ8WV28 456 aa4.36□□□□□ -1.71
SCN3A-203ENST00000409101 MARS2Q96GW9 593 aaKnown RBP4.36□□□□□ -1.71
SCN3A-203ENST00000409101 DERL3Q96Q80 235 aa4.36□□□□□ -1.71
SCN3A-203ENST00000409101 GPA33Q99795 319 aa4.36□□□□□ -1.71
SCN3A-203ENST00000409101 CHST5Q9GZS9 411 aa4.36□□□□□ -1.71
SCN3A-203ENST00000409101 PRDM14Q9GZV8 571 aa4.36□□□□□ -1.71
SCN3A-203ENST00000409101 RNF167Q9H6Y7 350 aa4.36□□□□□ -1.71
SCN3A-203ENST00000409101 GPR27Q9NS67 375 aa4.36□□□□□ -1.71
SCN3A-203ENST00000409101 IDI2-AS1Q9NZ38 188 aa4.36□□□□□ -1.71
SCN3A-203ENST00000409101 ZMIZ1Q9ULJ6 1067 aa4.36□□□□□ -1.71
SCN3A-203ENST00000409101 CHCHD2Q9Y6H1 151 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-203ENST00000409101 C1QTNF9BB2RNN3 333 aa4.36□□□□□ -1.71
SCN3A-203ENST00000409101 FXYD1O00168 92 aa4.36□□□□□ -1.71
SCN3A-203ENST00000409101 RAB29O14966 203 aa4.36□□□□□ -1.71
SCN3A-203ENST00000409101 C1QTNF9P0C862 333 aa4.36□□□□□ -1.71
SCN3A-203ENST00000409101 HTR1DP28221 377 aa4.36□□□□□ -1.71
SCN3A-203ENST00000409101 RPL12P30050 165 aaKnown RBP4.36□□□□□ -1.71
SCN3A-203ENST00000409101 ATP5G2Q06055 141 aa4.36□□□□□ -1.71
SCN3A-203ENST00000409101 MRPL14Q6P1L8 145 aaKnown RBP4.36□□□□□ -1.71
SCN3A-203ENST00000409101 EBLN2Q6P2I7 272 aa4.36□□□□□ -1.71
SCN3A-203ENST00000409101 C1orf162Q8NEQ5 155 aaPredicted RBP4.36□□□□□ -1.71
SCN3A-203ENST00000409101 LFNGQ8NES3 379 aa4.36□□□□□ -1.71
SCN3A-203ENST00000409101 OR5B3Q8NH48 314 aa4.36□□□□□ -1.71
SCN3A-203ENST00000409101 GATA6Q92908 595 aa4.36□□□□□ -1.71
SCN3A-203ENST00000409101 LHX4Q969G2 390 aa4.36□□□□□ -1.71
SCN3A-203ENST00000409101 TMEM54Q969K7 222 aa4.36□□□□□ -1.71
SCN3A-203ENST00000409101 SNRNP40Q96DI7 357 aaKnown RBP4.36□□□□□ -1.71
SCN3A-203ENST00000409101 WDYHV1Q96HA8 205 aa4.36□□□□□ -1.71
SCN3A-203ENST00000409101 RNF2Q99496 336 aa4.36□□□□□ -1.71
SCN3A-203ENST00000409101 WDR61Q9GZS3 305 aaKnown RBP4.36□□□□□ -1.71
SCN3A-203ENST00000409101 C7orf69Q9H7B7 122 aa4.36□□□□□ -1.71
SCN3A-203ENST00000409101 AUNIPQ9H7T9 357 aa4.36□□□□□ -1.71
SCN3A-203ENST00000409101 DOK5Q9P104 306 aa4.36□□□□□ -1.71
SCN3A-203ENST00000409101 PLPP2O43688 288 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 SYNGR1O43759 233 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 ZFPL1O95159 310 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 ASAH2BP0C7U1 165 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 APELAP0DMC3 54 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 COX5BP10606 129 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 MC5RP33032 325 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 NBL1P41271 181 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 NKX2-5P52952 324 aaPredicted RBP4.35□□□□□ -1.71
SCN3A-203ENST00000409101 RRN3P1Q2M238 152 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 CYB5R2Q6BCY4 276 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 SLC25A47Q6Q0C1 308 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 OR4X2Q8NGF9 303 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 ZNF488Q96MN9 340 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 ZNF385DQ9H6B1 395 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 UQCC1Q9NVA1 299 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 BRCA1P38398 1863 aaKnown RBP4.35□□□□□ -1.71
SCN3A-203ENST00000409101 ZNF638Q14966 1978 aaKnown RBP4.35□□□□□ -1.71
SCN3A-203ENST00000409101 A0A1W2PS18 150 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 ZNF705FA8MVS1 300 aaPredicted RBP4.35□□□□□ -1.71
SCN3A-203ENST00000409101 ZNHIT1O43257 154 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 SNAPINO95295 136 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 ZNF705DP0CH99 300 aaPredicted RBP4.35□□□□□ -1.71
SCN3A-203ENST00000409101 ZNF705BP0CI00 300 aaPredicted RBP4.35□□□□□ -1.71
SCN3A-203ENST00000409101 CD200P41217 278 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 FAM106AQ4KMX7 169 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 ZNF787Q6DD87 383 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 LCN15Q6UWW0 184 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 OR4A4PQ8NGN8 299 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 OR4C13Q8NGP0 309 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 WASHC3Q9Y3C0 194 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 SCN10AQ9Y5Y9 1956 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 TTC3P53804 2025 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 HMGA2P52926 109 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 PIGYQ3MUY2 71 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 PXDC1Q5TGL8 231 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 PRR27Q6MZM9 219 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 FADS6Q8N9I5 356 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 ZBTB34Q8NCN2 500 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 OR4D11Q8NGI4 311 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 YIPF5Q969M3 257 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 DUX5Q96PT3 197 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 LINC00470Q9BZP3 86 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 TMEM106BQ9NUM4 274 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 CACNG5Q9UF02 275 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 AUP1Q9Y679 476 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 A0A0G2JMM0 328 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 A0A1W2PPB8 328 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 A0A1W2PRS3 328 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 C20orf202A1L168 122 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 KIR3DP1A8MWS1 328 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 JTBO76095 146 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 GZMKP49863 264 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 P2RX3P56373 397 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 H3F3AP84243 136 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 SLC38A11Q08AI6 406 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 OR2F1Q13607 317 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 ETV3LQ6ZN32 361 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 TMUB2Q71RG4 321 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 NRARPQ7Z6K4 114 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 PNKDQ8N490 385 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 KCNRGQ8N5I3 272 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 C9orf106Q8NAJ2 232 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 ZFAND2BQ8WV99 257 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 NAA60Q9H7X0 242 aa4.35□□□□□ -1.71
SCN3A-203ENST00000409101 PLAC1Q9HBJ0 212 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms