RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 LILRA5A6NI73 299 aa12.38□□□□□ -0.43
COL4A3-202ENST00000396578 GCGP01275 180 aa12.38□□□□□ -0.43
COL4A3-202ENST00000396578 SH2D5Q6ZV89 423 aa12.38□□□□□ -0.43
COL4A3-202ENST00000396578 TSPAN32Q96QS1 320 aa12.38□□□□□ -0.43
COL4A3-202ENST00000396578 GPR27Q9NS67 375 aa12.38□□□□□ -0.43
COL4A3-202ENST00000396578 TMEM38BQ9NVV0 291 aa12.38□□□□□ -0.43
COL4A3-202ENST00000396578 GNG7O60262 68 aa12.38□□□□□ -0.43
COL4A3-202ENST00000396578 DAOP14920 347 aa12.38□□□□□ -0.43
COL4A3-202ENST00000396578 HIST1H1BP16401 226 aaKnown RBP12.38□□□□□ -0.43
COL4A3-202ENST00000396578 RAE1P78406 368 aaKnown RBP12.38□□□□□ -0.43
COL4A3-202ENST00000396578 C19orf57Q0VDD7 668 aa12.38□□□□□ -0.43
COL4A3-202ENST00000396578 ADIPOQQ15848 244 aa12.38□□□□□ -0.43
COL4A3-202ENST00000396578 ZNF32P17041 273 aa12.38□□□□□ -0.43
COL4A3-202ENST00000396578 BRS3P32247 399 aa12.38□□□□□ -0.43
COL4A3-202ENST00000396578 ZNF770Q6IQ21 691 aaPredicted RBP12.38□□□□□ -0.43
COL4A3-202ENST00000396578 DTD1Q8TEA8 209 aa12.38□□□□□ -0.43
COL4A3-202ENST00000396578 NEU3Q9UQ49 428 aa12.38□□□□□ -0.43
COL4A3-202ENST00000396578 C7orf77A4D0Y5 90 aa12.38□□□□□ -0.43
COL4A3-202ENST00000396578 FAM157CP0CG43 387 aa12.38□□□□□ -0.43
COL4A3-202ENST00000396578 FAM3BP58499 235 aaPredicted RBP12.38□□□□□ -0.43
COL4A3-202ENST00000396578 PPP2CBP62714 309 aa12.38□□□□□ -0.43
COL4A3-202ENST00000396578 CA10Q9NS85 328 aa12.38□□□□□ -0.43
COL4A3-202ENST00000396578 BCORQ6W2J9 1755 aa12.38□□□□□ -0.43
COL4A3-202ENST00000396578 C10orf113Q5VZT2 155 aa12.38□□□□□ -0.43
COL4A3-202ENST00000396578 SNRNP40Q96DI7 357 aaKnown RBP12.38□□□□□ -0.43
COL4A3-202ENST00000396578 COL25A1Q9BXS0 654 aaPredicted RBP12.38□□□□□ -0.43
COL4A3-202ENST00000396578 DNPH1O43598 174 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 FABP2P12104 132 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 PCMT1P22061 227 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 RPL34P49207 117 aaKnown RBP12.37□□□□□ -0.43
COL4A3-202ENST00000396578 FOXO1Q12778 655 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 TMEM108Q6UXF1 575 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 SLC25A42Q86VD7 318 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 SLC6A13Q9NSD5 602 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 PLPP3O14495 311 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 CEACAM5P06731 702 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 CCL7P80098 99 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 SERTM1A2A2V5 107 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 LMO7DNF2Z398 122 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 C3orf80F5H4A9 247 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 CRHP06850 196 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 HOXA4Q00056 320 aaPredicted RBP12.37□□□□□ -0.43
COL4A3-202ENST00000396578 PABPC1L2AQ5JQF8 200 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 TSPO2Q5TGU0 170 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 LRRC29Q8WV35 223 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 MRPL13Q9BYD1 178 aaKnown RBP12.37□□□□□ -0.43
COL4A3-202ENST00000396578 HTN1P15515 57 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 PLP1P60201 277 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 WIPI1Q5MNZ9 446 aaPredicted RBP12.37□□□□□ -0.43
COL4A3-202ENST00000396578 C9orf62Q8N4C0 152 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 LOC389332A0A1B0GUA5 103 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 ADAP1O75689 374 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 TAS2R60P59551 318 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 ST6GAL2Q96JF0 529 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 FOXQ1Q9C009 403 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 AMDHD2Q9Y303 409 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 COX7A1P24310 79 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 CD82P27701 267 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 GNRHR2Q96P88 292 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 TMEM204Q9BSN7 226 aa12.37□□□□□ -0.43
COL4A3-202ENST00000396578 A0A1W2PPC4 97 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 ASPDHA6ND91 283 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 CDK2AP1O14519 115 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 MYOGP15173 224 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 TWIST1Q15672 202 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 RAB1BQ9H0U4 201 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 ZNF107Q9UII5 783 aaPredicted RBP12.36□□□□□ -0.43
COL4A3-202ENST00000396578 ARFGEF1Q9Y6D6 1849 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 HOXA6P31267 233 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 SRP14P37108 136 aaKnown RBP12.36□□□□□ -0.43
COL4A3-202ENST00000396578 RELBQ01201 579 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 PRICKLE4Q2TBC4 344 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 TMEM255AQ5JRV8 349 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 SLC25A30Q5SVS4 291 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 ZNF841Q6ZN19 808 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 RSG1Q9BU20 258 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 NKX2-2O95096 273 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 COX6CP09669 75 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 TCTAP57738 103 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 TTC32Q5I0X7 151 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 GBGT1Q8N5D6 347 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 STXBP6Q8NFX7 210 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 PIPOXQ9P0Z9 390 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 TMPRSS2O15393 492 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 PRR35P0CG20 571 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 CXCL3P19876 107 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 SSMEM1Q8WWF3 244 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 C10orf35Q96D05 121 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 ASCL3Q9NQ33 180 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 A0A1B0GTL3 188 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 DHRS7CA6NNS2 312 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 SSX8Q7RTT4 187 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 FAM219AQ8IW50 185 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 HSF4Q9ULV5 492 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 SBK3P0C264 359 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 RPS4XP62701 263 aaKnown RBP12.36□□□□□ -0.43
COL4A3-202ENST00000396578 LYPD8Q6UX82 237 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 CLEC18BQ6UXF7 455 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 C17orf47Q8NEP4 570 aa12.36□□□□□ -0.43
COL4A3-202ENST00000396578 OR2I1PQ8NGU4 316 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms