RNA–Protein interactions for RNA: ENST00000381753.8

LIMCH1-202, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-202ENST00000381753 SLC25A6P12236 298 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 NKX2-1P43699 371 aaPredicted RBP7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 GCSAMQ8N6F7 178 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 KLHL30-AS1Q8NEE0 82 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 SEPSECSQ9HD40 501 aaKnown RBP7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 STARD10Q9Y365 291 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 UNC13CQ8NB66 2214 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 DBX1A6NMT0 343 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 RGS13O14921 159 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 OR2A4O95047 310 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 IGHV3-11P01762 117 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 ORM1P02763 201 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 ISG15P05161 165 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 ACAA1P09110 424 aaPredicted RBP7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 RPL27AP46776 148 aaKnown RBP7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 TSPAN32Q96QS1 320 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 OR2A7Q96R45 310 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 DPM3Q9P2X0 92 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 TRIP11Q15643 1979 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 A0A0D9SG52 128 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 C17orf100A8MU93 164 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 AGPAT2O15120 278 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 ZNF620Q6ZNG0 422 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 GDPD1Q8N9F7 314 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 A0A1W2PQL4 384 aaPredicted RBP7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 FABP7O15540 132 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 EFEMP2O95967 443 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 CGB3P0DN86 165 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 CTLA4P16410 223 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 ALOX5APP20292 161 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 RPS25P62851 125 aaKnown RBP7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 ZNF826PQ6ZT77 177 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 SLC25A46Q96AG3 418 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 UFC1Q9Y3C8 167 aa7.97□□□□□ -1.13
LIMCH1-202ENST00000381753 TRGV2A0A075B6R0 118 aa7.96□□□□□ -1.13
LIMCH1-202ENST00000381753 K7EPK0 472 aa7.96□□□□□ -1.13
LIMCH1-202ENST00000381753 SPDEFO95238 335 aa7.96□□□□□ -1.13
LIMCH1-202ENST00000381753 CECR9P0C854 216 aa7.96□□□□□ -1.13
LIMCH1-202ENST00000381753 NR4A2P43354 598 aa7.96□□□□□ -1.13
LIMCH1-202ENST00000381753 PRSS48Q7RTY5 328 aa7.96□□□□□ -1.13
LIMCH1-202ENST00000381753 ZNF683Q8IZ20 524 aa7.96□□□□□ -1.13
LIMCH1-202ENST00000381753 FAM71E2Q8N5Q1 922 aa7.96□□□□□ -1.13
LIMCH1-202ENST00000381753 CHRDL1Q9BU40 450 aa7.96□□□□□ -1.13
LIMCH1-202ENST00000381753 PLA2G12AQ9BZM1 189 aa7.96□□□□□ -1.13
LIMCH1-202ENST00000381753 BIN3Q9NQY0 253 aa7.96□□□□□ -1.13
LIMCH1-202ENST00000381753 ARPC5O15511 151 aa7.96□□□□□ -1.13
LIMCH1-202ENST00000381753 DFFBO76075 338 aa7.96□□□□□ -1.13
LIMCH1-202ENST00000381753 ALDOCP09972 364 aaKnown RBP7.96□□□□□ -1.13
LIMCH1-202ENST00000381753 EGR1P18146 543 aa7.96□□□□□ -1.13
LIMCH1-202ENST00000381753 SRMP19623 302 aa7.96□□□□□ -1.13
LIMCH1-202ENST00000381753 PRR27Q6MZM9 219 aa7.96□□□□□ -1.13
LIMCH1-202ENST00000381753 IDO2Q6ZQW0 420 aa7.96□□□□□ -1.13
LIMCH1-202ENST00000381753 ZNF561Q8N587 486 aa7.96□□□□□ -1.13
LIMCH1-202ENST00000381753 HSD17B11Q8NBQ5 300 aa7.96□□□□□ -1.13
LIMCH1-202ENST00000381753 SLA2Q9H6Q3 261 aa7.96□□□□□ -1.13
LIMCH1-202ENST00000381753 COL5A3P25940 1745 aaPredicted RBP7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 RAB29O14966 203 aa7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 UMODP07911 640 aa7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 MGPP08493 103 aa7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 AKR1C3P42330 323 aa7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 CMC4P56277 68 aaPredicted RBP7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 C1QTNF12Q5T7M4 302 aa7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 BTNL8Q6UX41 500 aa7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 SYT8Q8NBV8 401 aa7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 MARS2Q96GW9 593 aaKnown RBP7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 IDI2-AS1Q9NZ38 188 aa7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 PSENENQ9NZ42 101 aa7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 FITM1A5D6W6 292 aa7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 BMPR1BO00238 502 aa7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 ARPC1BO15143 372 aaKnown RBP7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 GATA3P23771 443 aa7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 SORDQ00796 357 aa7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 KISS1Q15726 138 aa7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 TMEM268Q5VZI3 342 aa7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 DNM1P46Q6ZS02 220 aa7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 OTOSQ8NHW6 89 aa7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 MARCH1Q8TCQ1 289 aa7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 THADAQ6YHU6 1953 aa7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 MSMBP08118 114 aa7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 LGALSLQ3ZCW2 172 aaPredicted RBP7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 C19orf54Q5BKX5 351 aa7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 NFAM1Q8NET5 270 aaPredicted RBP7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 RNF141Q8WVD5 230 aa7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 C18orf12Q96KH6 178 aa7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 DERL3Q96Q80 235 aa7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 NPAS1Q99742 590 aa7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 ETV7Q9Y603 341 aa7.96□□□□□ -1.14
LIMCH1-202ENST00000381753 IGKV3OR2-268A0A0C4DH90 116 aa7.95□□□□□ -1.14
LIMCH1-202ENST00000381753 SLC25A5P05141 298 aaKnown RBP7.95□□□□□ -1.14
LIMCH1-202ENST00000381753 SNRPBP14678 240 aaKnown RBP7.95□□□□□ -1.14
LIMCH1-202ENST00000381753 PMELP40967 661 aa7.95□□□□□ -1.14
LIMCH1-202ENST00000381753 ACOT6Q3I5F7 207 aaPredicted RBP7.95□□□□□ -1.14
LIMCH1-202ENST00000381753 SPINK9Q5DT21 86 aa7.95□□□□□ -1.14
LIMCH1-202ENST00000381753 TPRX1Q8N7U7 411 aa7.95□□□□□ -1.14
LIMCH1-202ENST00000381753 LHFPL5Q8TAF8 219 aa7.95□□□□□ -1.14
LIMCH1-202ENST00000381753 LGALS14Q8TCE9 139 aa7.95□□□□□ -1.14
LIMCH1-202ENST00000381753 NIPSNAP3BQ9BS92 247 aa7.95□□□□□ -1.14
LIMCH1-202ENST00000381753 SRXN1Q9BYN0 137 aa7.95□□□□□ -1.14
LIMCH1-202ENST00000381753 GMPR2Q9P2T1 348 aaKnown RBP7.95□□□□□ -1.14
LIMCH1-202ENST00000381753 H0Y8G0 127 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms