RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 ACSF3Q4G176 576 aaPredicted RBP8.95□□□□□ -0.98
POLR2J3-201ENST00000379340 TOR2AQ5JU69 321 aa8.95□□□□□ -0.98
POLR2J3-201ENST00000379340 OR2T2Q6IF00 324 aa8.95□□□□□ -0.98
POLR2J3-201ENST00000379340 RGS7BPQ6MZT1 257 aaPredicted RBP8.95□□□□□ -0.98
POLR2J3-201ENST00000379340 FAM58AQ8N1B3 248 aa8.95□□□□□ -0.98
POLR2J3-201ENST00000379340 STOML3Q8TAV4 291 aa8.95□□□□□ -0.98
POLR2J3-201ENST00000379340 DYRK2Q92630 601 aa8.95□□□□□ -0.98
POLR2J3-201ENST00000379340 TOMM40LQ969M1 308 aa8.95□□□□□ -0.98
POLR2J3-201ENST00000379340 MARS2Q96GW9 593 aaKnown RBP8.95□□□□□ -0.98
POLR2J3-201ENST00000379340 ZNF471Q9BX82 626 aaPredicted RBP8.95□□□□□ -0.98
POLR2J3-201ENST00000379340 PLSCR4Q9NRQ2 329 aa8.95□□□□□ -0.98
POLR2J3-201ENST00000379340 ZNF629Q9UEG4 869 aaPredicted RBP8.95□□□□□ -0.98
POLR2J3-201ENST00000379340 RELNP78509 3460 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 CREBBPQ92793 2442 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 F8VVB4 439 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 F8VWA3 439 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 H7C1Q1 480 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 SYNGR1O43759 233 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 LYZL6O75951 148 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 PPYP01298 95 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 IGKV3-15P01624 115 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 TK1P04183 234 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 ACAA1P09110 424 aaPredicted RBP8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 CA6P23280 308 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 IDH3GP51553 393 aaPredicted RBP8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 RND3P61587 244 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 EIF5AP63241 154 aaKnown RBP8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 TMEM187Q14656 261 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 SMCO1Q147U7 214 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 ATXN7L3Q14CW9 347 aaPredicted RBP8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 FAM76BQ5HYJ3 339 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 BRICD5Q6PL45 260 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 CCDC28AQ8IWP9 274 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 GCNT2Q8N0V5 402 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 CNEP1R1Q8N9A8 125 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 C9orf106Q8NAJ2 232 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 BHLHE23Q8NDY6 225 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 RTN4IP1Q8WWV3 396 aaPredicted RBP8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 RBPMSQ93062 196 aaKnown RBP8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 OR10C1Q96KK4 312 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 AQP10Q96PS8 301 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 RNF126Q9BV68 326 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 WDR13Q9H1Z4 485 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 LIME1Q9H400 295 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 SLC2A9Q9NRM0 540 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 RASL12Q9NYN1 266 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 TUBD1Q9UJT1 453 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 FBXO9Q9UK97 447 aaPredicted RBP8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 PROCRQ9UNN8 238 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 ATP23Q9Y6H3 246 aa8.94□□□□□ -0.98
POLR2J3-201ENST00000379340 SPTBN1Q01082 2364 aaKnown RBP8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 PIGBOS1A0A0B4J2F0 54 aa8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 FAM221AA4D161 298 aa8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 MBD3L4A6NDZ8 208 aaPredicted RBP8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 MBD3L3A6NE82 208 aaPredicted RBP8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 MBD3L5A6NJ08 208 aaPredicted RBP8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 TRDCB7Z8K6 153 aa8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 F5H0A9 414 aaPredicted RBP8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 I3L521 148 aa8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 TAAR5O14804 337 aa8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 SHOXO15266 292 aa8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 PDGFAP04085 211 aa8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 RLN2P04090 185 aa8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 HOXB5P09067 269 aa8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 TPT1P13693 172 aaKnown RBP8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 IL32P24001 234 aa8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 LUMP51884 338 aaPredicted RBP8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 UCP2P55851 309 aa8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 TLE1Q04724 770 aa8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 P2RY6Q15077 328 aa8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 IAH1Q2TAA2 248 aaPredicted RBP8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 SHEQ5VZ18 495 aa8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 LIAT1Q6ZQX7 453 aa8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 MOB1BQ7L9L4 216 aa8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 HSD17B13Q7Z5P4 300 aaPredicted RBP8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 LGI3Q8N145 548 aa8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 FAM169BQ8N8A8 192 aa8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 SUMF2Q8NBJ7 301 aa8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 MBD3L2Q8NHZ7 208 aaPredicted RBP8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 SLC25A40Q8TBP6 338 aa8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 NEK7Q8TDX7 302 aa8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 SLX1AQ9BQ83 275 aa8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 TREM2Q9NZC2 230 aa8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 AMDHD2Q9Y303 409 aa8.93□□□□□ -0.98
POLR2J3-201ENST00000379340 MFSD2BA6NFX1 497 aa8.92□□□□□ -0.98
POLR2J3-201ENST00000379340 H0YIZ8 118 aa8.92□□□□□ -0.98
POLR2J3-201ENST00000379340 CRYABP02511 175 aaKnown RBP8.92□□□□□ -0.98
POLR2J3-201ENST00000379340 CELA3BP08861 270 aa8.92□□□□□ -0.98
POLR2J3-201ENST00000379340 AADACP22760 399 aa8.92□□□□□ -0.98
POLR2J3-201ENST00000379340 FXYD4P59646 89 aa8.92□□□□□ -0.98
POLR2J3-201ENST00000379340 RAB32Q13637 225 aa8.92□□□□□ -0.98
POLR2J3-201ENST00000379340 PDCD1Q15116 288 aa8.92□□□□□ -0.98
POLR2J3-201ENST00000379340 IGFBP7Q16270 282 aa8.92□□□□□ -0.98
POLR2J3-201ENST00000379340 C1QTNF12Q5T7M4 302 aa8.92□□□□□ -0.98
POLR2J3-201ENST00000379340 GGNBP1Q5YKI7 109 aa8.92□□□□□ -0.98
POLR2J3-201ENST00000379340 VWA1Q6PCB0 445 aa8.92□□□□□ -0.98
POLR2J3-201ENST00000379340 ZNF880Q6PDB4 577 aa8.92□□□□□ -0.98
POLR2J3-201ENST00000379340 FIP1L1Q6UN15 594 aaKnown RBP8.92□□□□□ -0.98
POLR2J3-201ENST00000379340 Q6ZPA2 131 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms