RNA–Protein interactions for RNA: ENST00000377107.6

USP11-204, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP11, Length 3,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-204ENST00000377107 OR5C1Q8NGR4 320 aa11.14□□□□□ -0.63
USP11-204ENST00000377107 SFT2D1Q8WV19 159 aa11.14□□□□□ -0.63
USP11-204ENST00000377107 APH1AQ96BI3 265 aa11.14□□□□□ -0.63
USP11-204ENST00000377107 RARRES2Q99969 163 aa11.14□□□□□ -0.63
USP11-204ENST00000377107 B4GALT7Q9UBV7 327 aa11.14□□□□□ -0.63
USP11-204ENST00000377107 A0A1W2PPH5 198 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 SIRPB1O00241 398 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 SLC34A2O95436 690 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 SERPINE2P07093 398 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 DVL1P1P54792 670 aaPredicted RBP11.13□□□□□ -0.63
USP11-204ENST00000377107 ZXDAP98168 799 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 OR1C1Q15619 314 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 HFEQ30201 348 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 TMPRSS7Q7RTY8 843 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 CXorf67Q86X51 503 aaPredicted RBP11.13□□□□□ -0.63
USP11-204ENST00000377107 ZDHHC23Q8IYP9 409 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 GCNT2Q8N0V5 402 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 SUCNR1Q9BXA5 334 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 STRADBQ9C0K7 418 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 ANAPC10Q9UM13 185 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 FOXI3A8MTJ6 420 aaPredicted RBP11.13□□□□□ -0.63
USP11-204ENST00000377107 C1orf196B1AJZ1 125 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 RBMXL2O75526 392 aaKnown RBP11.13□□□□□ -0.63
USP11-204ENST00000377107 IAPPP10997 89 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 ALDH3B1P43353 468 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 ZNF818PQ6ZRF7 136 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 BIN3Q9NQY0 253 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 SMCO4Q9NRQ5 59 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 FAM86C1Q9NVL1 165 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 A0A1W2PPE2 198 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 CEACAM18A8MTB9 384 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 TERTO14746 1132 aaKnown RBP11.13□□□□□ -0.63
USP11-204ENST00000377107 GPR137BO60478 399 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 LILRA1O75019 489 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 WDR1O75083 606 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 FBP1P09467 338 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 RAB5BP61020 215 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 EWSR1Q01844 656 aaKnown RBP eCLIP11.13□□□□□ -0.63
USP11-204ENST00000377107 TMEM164Q5U3C3 297 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 CMTM1Q8IZ96 169 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 OR2C3Q8N628 320 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 SMIM8Q96KF7 97 aa11.13□□□□□ -0.63
USP11-204ENST00000377107 ERRFI1Q9UJM3 462 aaPredicted RBP11.13□□□□□ -0.63
USP11-204ENST00000377107 IGKV1D-13A0A0B4J2D9 117 aa11.12□□□□□ -0.63
USP11-204ENST00000377107 TXNL1O43396 289 aa11.12□□□□□ -0.63
USP11-204ENST00000377107 IGLV3-1P01715 115 aa11.12□□□□□ -0.63
USP11-204ENST00000377107 GRPP07492 148 aa11.12□□□□□ -0.63
USP11-204ENST00000377107 IGKV1-13P0DP09 117 aa11.12□□□□□ -0.63
USP11-204ENST00000377107 DTYMKP23919 212 aa11.12□□□□□ -0.63
USP11-204ENST00000377107 ZFP36L1Q07352 338 aaKnown RBP11.12□□□□□ -0.63
USP11-204ENST00000377107 ZNF154Q13106 437 aa11.12□□□□□ -0.63
USP11-204ENST00000377107 RNF150Q9ULK6 438 aa11.12□□□□□ -0.63
USP11-204ENST00000377107 C7orf77A4D0Y5 90 aa11.12□□□□□ -0.63
USP11-204ENST00000377107 ARGFXA6NJG6 315 aa11.12□□□□□ -0.63
USP11-204ENST00000377107 ANKRD30BLA7E2S9 258 aa11.12□□□□□ -0.63
USP11-204ENST00000377107 SERPINA7P05543 415 aa11.12□□□□□ -0.63
USP11-204ENST00000377107 APLNRP35414 380 aa11.12□□□□□ -0.63
USP11-204ENST00000377107 TMEM267Q0VDI3 215 aaPredicted RBP11.12□□□□□ -0.63
USP11-204ENST00000377107 DHRS13Q6UX07 377 aa11.12□□□□□ -0.63
USP11-204ENST00000377107 C1orf210Q8IVY1 113 aa11.12□□□□□ -0.63
USP11-204ENST00000377107 PLPPR2Q96GM1 343 aa11.12□□□□□ -0.63
USP11-204ENST00000377107 FOXJ2Q9P0K8 574 aa11.12□□□□□ -0.63
USP11-204ENST00000377107 DOCK11Q5JSL3 2073 aa11.12□□□□□ -0.63
USP11-204ENST00000377107 DSPP15924 2871 aaKnown RBP11.12□□□□□ -0.63
USP11-204ENST00000377107 HIST1H3AP68431 136 aa11.12□□□□□ -0.63
USP11-204ENST00000377107 SOHLH1Q5JUK2 328 aa11.12□□□□□ -0.63
USP11-204ENST00000377107 HIST2H3PS2Q5TEC6 136 aa11.12□□□□□ -0.63
USP11-204ENST00000377107 HIST2H3AQ71DI3 136 aa11.12□□□□□ -0.63
USP11-204ENST00000377107 LINC00518Q8N0U6 118 aa11.12□□□□□ -0.63
USP11-204ENST00000377107 SUMF2Q8NBJ7 301 aa11.12□□□□□ -0.63
USP11-204ENST00000377107 C10orf35Q96D05 121 aa11.12□□□□□ -0.63
USP11-204ENST00000377107 ABI3Q9P2A4 366 aa11.12□□□□□ -0.63
USP11-204ENST00000377107 IL17BQ9UHF5 180 aa11.12□□□□□ -0.63
USP11-204ENST00000377107 MMP24Q9Y5R2 645 aa11.12□□□□□ -0.63
USP11-204ENST00000377107 ZNF503-AS2A6NEH8 195 aa11.11□□□□□ -0.63
USP11-204ENST00000377107 CHST1O43916 411 aa11.11□□□□□ -0.63
USP11-204ENST00000377107 IL15RAQ13261 267 aa11.11□□□□□ -0.63
USP11-204ENST00000377107 OR2M7Q8NG81 312 aa11.11□□□□□ -0.63
USP11-204ENST00000377107 MOB3AQ96BX8 217 aa11.11□□□□□ -0.63
USP11-204ENST00000377107 MTCH1Q9NZJ7 389 aa11.11□□□□□ -0.63
USP11-204ENST00000377107 PRSS50Q9UI38 385 aa11.11□□□□□ -0.63
USP11-204ENST00000377107 HSF4Q9ULV5 492 aa11.11□□□□□ -0.63
USP11-204ENST00000377107 POLEQ07864 2286 aa11.11□□□□□ -0.63
USP11-204ENST00000377107 EXPH5Q8NEV8 1989 aa11.11□□□□□ -0.63
USP11-204ENST00000377107 BDP1A6H8Y1 2624 aa11.11□□□□□ -0.63
USP11-204ENST00000377107 NTN3O00634 580 aaPredicted RBP11.11□□□□□ -0.63
USP11-204ENST00000377107 IDH3GP51553 393 aaPredicted RBP11.11□□□□□ -0.63
USP11-204ENST00000377107 HOXA4Q00056 320 aaPredicted RBP11.11□□□□□ -0.63
USP11-204ENST00000377107 SSPNQ14714 243 aa11.11□□□□□ -0.63
USP11-204ENST00000377107 LTC4SQ16873 150 aa11.11□□□□□ -0.63
USP11-204ENST00000377107 BTNL8Q6UX41 500 aa11.11□□□□□ -0.63
USP11-204ENST00000377107 SLC16A13Q7RTY0 426 aa11.11□□□□□ -0.63
USP11-204ENST00000377107 NTNG2Q96CW9 530 aa11.11□□□□□ -0.63
USP11-204ENST00000377107 MSI2Q96DH6 328 aaKnown RBP11.11□□□□□ -0.63
USP11-204ENST00000377107 PARP11Q9NR21 331 aa11.11□□□□□ -0.63
USP11-204ENST00000377107 CD300LBA8K4G0 201 aa11.1□□□□□ -0.63
USP11-204ENST00000377107 TUSC2O75896 110 aa11.1□□□□□ -0.63
USP11-204ENST00000377107 ATP6V0CP27449 155 aa11.1□□□□□ -0.63
USP11-204ENST00000377107 DYNLT3P51808 116 aa11.1□□□□□ -0.63
USP11-204ENST00000377107 TRA2AQ13595 282 aaKnown RBP eCLIP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms