RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 TBC1D28Q2M2D7 210 aa15.98■□□□□ 0.15
USP49-202ENST00000373010 FAM58AQ8N1B3 248 aa15.98■□□□□ 0.15
USP49-202ENST00000373010 SLC35G3Q8N808 338 aa15.98■□□□□ 0.15
USP49-202ENST00000373010 OR51I2Q9H344 312 aa15.98■□□□□ 0.15
USP49-202ENST00000373010 ASCL3Q9NQ33 180 aa15.98■□□□□ 0.15
USP49-202ENST00000373010 TRAV24A0A0B4J272 114 aa15.98■□□□□ 0.15
USP49-202ENST00000373010 RAB19A4D1S5 217 aa15.98■□□□□ 0.15
USP49-202ENST00000373010 TRDCB7Z8K6 153 aa15.98■□□□□ 0.15
USP49-202ENST00000373010 TSPAN4O14817 238 aa15.98■□□□□ 0.15
USP49-202ENST00000373010 SRSF3P84103 164 aaKnown RBP15.98■□□□□ 0.15
USP49-202ENST00000373010 TMEM268Q5VZI3 342 aa15.98■□□□□ 0.15
USP49-202ENST00000373010 MRPL30Q8TCC3 161 aaKnown RBP15.98■□□□□ 0.15
USP49-202ENST00000373010 ERGIC1Q969X5 290 aa15.98■□□□□ 0.15
USP49-202ENST00000373010 TRIB1Q96RU8 372 aa15.98■□□□□ 0.15
USP49-202ENST00000373010 LPAR3Q9UBY5 353 aa15.98■□□□□ 0.15
USP49-202ENST00000373010 FBXO9Q9UK97 447 aaPredicted RBP15.98■□□□□ 0.15
USP49-202ENST00000373010 KCNJ3P48549 501 aa15.97■□□□□ 0.15
USP49-202ENST00000373010 SRSF7Q16629 238 aaKnown RBP eCLIP15.97■□□□□ 0.15
USP49-202ENST00000373010 ZNF818PQ6ZRF7 136 aa15.97■□□□□ 0.15
USP49-202ENST00000373010 TBC1D26Q86UD7 250 aa15.97■□□□□ 0.15
USP49-202ENST00000373010 ARL11Q969Q4 196 aa15.97■□□□□ 0.15
USP49-202ENST00000373010 LRRC46Q96FV0 321 aa15.97■□□□□ 0.15
USP49-202ENST00000373010 CLCF1Q9UBD9 225 aa15.97■□□□□ 0.15
USP49-202ENST00000373010 TPD52L2O43399 206 aaKnown RBP15.97■□□□□ 0.15
USP49-202ENST00000373010 FBXO24O75426 580 aa15.97■□□□□ 0.15
USP49-202ENST00000373010 IL24Q13007 206 aa15.97■□□□□ 0.15
USP49-202ENST00000373010 FBXW12Q6X9E4 464 aa15.97■□□□□ 0.15
USP49-202ENST00000373010 ZNF565Q8N9K5 539 aa15.97■□□□□ 0.15
USP49-202ENST00000373010 OR2J1Q9GZK6 312 aa15.97■□□□□ 0.15
USP49-202ENST00000373010 PLK3Q9H4B4 646 aa15.97■□□□□ 0.15
USP49-202ENST00000373010 PLA2G2EQ9NZK7 142 aa15.97■□□□□ 0.15
USP49-202ENST00000373010 GLS2Q9UI32 602 aa15.97■□□□□ 0.15
USP49-202ENST00000373010 E5RGE8 158 aa15.96■□□□□ 0.15
USP49-202ENST00000373010 SMPD2O60906 423 aa15.96■□□□□ 0.15
USP49-202ENST00000373010 UQCC3Q6UW78 93 aa15.96■□□□□ 0.15
USP49-202ENST00000373010 WDR86Q86TI4 376 aa15.96■□□□□ 0.15
USP49-202ENST00000373010 LDLRAD3Q86YD5 345 aa15.96■□□□□ 0.15
USP49-202ENST00000373010 GAPTQ8N292 157 aa15.96■□□□□ 0.15
USP49-202ENST00000373010 USB1Q9BQ65 265 aaKnown RBP15.96■□□□□ 0.15
USP49-202ENST00000373010 PLEKHA2Q9HB19 425 aa15.96■□□□□ 0.15
USP49-202ENST00000373010 ZDHHC8Q9ULC8 765 aa15.96■□□□□ 0.15
USP49-202ENST00000373010 NSG2Q9Y328 171 aa15.96■□□□□ 0.15
USP49-202ENST00000373010 ATP23Q9Y6H3 246 aa15.96■□□□□ 0.15
USP49-202ENST00000373010 IGHV3-64DA0A0J9YX35 117 aa15.96■□□□□ 0.15
USP49-202ENST00000373010 KIR2DS1A0A191URI9 304 aa15.96■□□□□ 0.15
USP49-202ENST00000373010 HSD17B6O14756 317 aa15.96■□□□□ 0.15
USP49-202ENST00000373010 SLC34A2O95436 690 aa15.96■□□□□ 0.15
USP49-202ENST00000373010 IGHG3P01860 377 aa15.96■□□□□ 0.15
USP49-202ENST00000373010 KIR2DS4P43632 304 aa15.96■□□□□ 0.15
USP49-202ENST00000373010 UBE2NP61088 152 aaKnown RBP15.96■□□□□ 0.15
USP49-202ENST00000373010 PPP1CBP62140 327 aa15.96■□□□□ 0.15
USP49-202ENST00000373010 EIF5AP63241 154 aaKnown RBP15.96■□□□□ 0.15
USP49-202ENST00000373010 KIR2DS1Q14954 304 aa15.96■□□□□ 0.15
USP49-202ENST00000373010 ALKBH6Q3KRA9 238 aa15.96■□□□□ 0.15
USP49-202ENST00000373010 OR4A4PQ8NGN8 299 aa15.96■□□□□ 0.15
USP49-202ENST00000373010 PKIBQ9C010 78 aa15.96■□□□□ 0.15
USP49-202ENST00000373010 TMEM222Q9H0R3 208 aa15.96■□□□□ 0.15
USP49-202ENST00000373010 HRH4Q9H3N8 390 aa15.96■□□□□ 0.15
USP49-202ENST00000373010 DLL3Q9NYJ7 618 aa15.96■□□□□ 0.15
USP49-202ENST00000373010 UBE2J1Q9Y385 318 aaPredicted RBP15.96■□□□□ 0.15
USP49-202ENST00000373010 NKX2-6A6NCS4 301 aa15.95■□□□□ 0.14
USP49-202ENST00000373010 ABCD4O14678 606 aa15.95■□□□□ 0.14
USP49-202ENST00000373010 TUSC2O75896 110 aa15.95■□□□□ 0.14
USP49-202ENST00000373010 CDH20Q9HBT6 801 aa15.95■□□□□ 0.14
USP49-202ENST00000373010 SPACA1Q9HBV2 294 aa15.95■□□□□ 0.14
USP49-202ENST00000373010 CCL28Q9NRJ3 127 aa15.95■□□□□ 0.14
USP49-202ENST00000373010 J3QT63 122 aa15.95■□□□□ 0.14
USP49-202ENST00000373010 GLAP06280 429 aa15.95■□□□□ 0.14
USP49-202ENST00000373010 LPAR6P43657 344 aa15.95■□□□□ 0.14
USP49-202ENST00000373010 LINC00596Q86U02 117 aa15.95■□□□□ 0.14
USP49-202ENST00000373010 FAM185AQ8N0U4 392 aa15.95■□□□□ 0.14
USP49-202ENST00000373010 CNEP1R1Q8N9A8 125 aa15.95■□□□□ 0.14
USP49-202ENST00000373010 TMEM231Q9H6L2 316 aa15.95■□□□□ 0.14
USP49-202ENST00000373010 RCL1Q9Y2P8 373 aaKnown RBP15.95■□□□□ 0.14
USP49-202ENST00000373010 TMED3Q9Y3Q3 217 aa15.95■□□□□ 0.14
USP49-202ENST00000373010 TMEM218A2RU14 115 aa15.94■□□□□ 0.14
USP49-202ENST00000373010 GPR31O00270 319 aa15.94■□□□□ 0.14
USP49-202ENST00000373010 MED6O75586 246 aa15.94■□□□□ 0.14
USP49-202ENST00000373010 ZNF44P15621 663 aa15.94■□□□□ 0.14
USP49-202ENST00000373010 IL13RA2Q14627 380 aa15.94■□□□□ 0.14
USP49-202ENST00000373010 MMP26Q9NRE1 261 aa15.94■□□□□ 0.14
USP49-202ENST00000373010 TRAV39A0A0B4J263 110 aa15.94■□□□□ 0.14
USP49-202ENST00000373010 GAPDHP04406 335 aaKnown RBP15.94■□□□□ 0.14
USP49-202ENST00000373010 TGFBR3Q03167 851 aa15.94■□□□□ 0.14
USP49-202ENST00000373010 PCSK4Q6UW60 755 aa15.94■□□□□ 0.14
USP49-202ENST00000373010 FAM214BQ7L5A3 538 aa15.94■□□□□ 0.14
USP49-202ENST00000373010 OR4D5Q8NGN0 318 aa15.94■□□□□ 0.14
USP49-202ENST00000373010 SMIM8Q96KF7 97 aa15.94■□□□□ 0.14
USP49-202ENST00000373010 RTL8AQ9BWD3 113 aa15.94■□□□□ 0.14
USP49-202ENST00000373010 WFDC1Q9HC57 220 aa15.94■□□□□ 0.14
USP49-202ENST00000373010 ASPMQ8IZT6 3477 aa15.93■□□□□ 0.14
USP49-202ENST00000373010 DEGS1O15121 323 aa15.93■□□□□ 0.14
USP49-202ENST00000373010 ST8SIA3O43173 380 aa15.93■□□□□ 0.14
USP49-202ENST00000373010 JTBO76095 146 aa15.93■□□□□ 0.14
USP49-202ENST00000373010 ADCYAP1P18509 176 aa15.93■□□□□ 0.14
USP49-202ENST00000373010 TAGLNQ01995 201 aaKnown RBP15.93■□□□□ 0.14
USP49-202ENST00000373010 ZNF273Q14593 569 aa15.93■□□□□ 0.14
USP49-202ENST00000373010 GABRA6Q16445 453 aa15.93■□□□□ 0.14
USP49-202ENST00000373010 EIF5AL1Q6IS14 154 aaKnown RBP15.93■□□□□ 0.14
USP49-202ENST00000373010 Q6P435 159 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms