RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 OR2H1Q9GZK4 316 aa16.44■□□□□ 0.22
RTN4-201ENST00000317610 MMP24Q9Y5R2 645 aa16.44■□□□□ 0.22
RTN4-201ENST00000317610 H0YL77 283 aa16.44■□□□□ 0.22
RTN4-201ENST00000317610 GATCO43716 136 aaKnown RBP16.44■□□□□ 0.22
RTN4-201ENST00000317610 OR7C1O76099 320 aaPredicted RBP16.44■□□□□ 0.22
RTN4-201ENST00000317610 YIF1AO95070 293 aa16.44■□□□□ 0.22
RTN4-201ENST00000317610 SLC34A2O95436 690 aa16.44■□□□□ 0.22
RTN4-201ENST00000317610 TMEM50AO95807 157 aa16.44■□□□□ 0.22
RTN4-201ENST00000317610 PATE4P0C8F1 98 aa16.44■□□□□ 0.22
RTN4-201ENST00000317610 B4GALT1P15291 398 aa16.44■□□□□ 0.22
RTN4-201ENST00000317610 UCP1P25874 307 aa16.44■□□□□ 0.22
RTN4-201ENST00000317610 DLK1P80370 383 aa16.44■□□□□ 0.22
RTN4-201ENST00000317610 ZNF429Q86V71 674 aa16.44■□□□□ 0.22
RTN4-201ENST00000317610 SPSB4Q96A44 273 aa16.44■□□□□ 0.22
RTN4-201ENST00000317610 RBMXL1Q96E39 390 aaKnown RBP16.44■□□□□ 0.22
RTN4-201ENST00000317610 BCL2L14Q9BZR8 327 aa16.44■□□□□ 0.22
RTN4-201ENST00000317610 ZNF700Q9H0M5 742 aa16.44■□□□□ 0.22
RTN4-201ENST00000317610 EYSQ5T1H1 3165 aa16.43■□□□□ 0.22
RTN4-201ENST00000317610 CEP290O15078 2479 aa16.43■□□□□ 0.22
RTN4-201ENST00000317610 ZNF716A6NP11 495 aa16.43■□□□□ 0.22
RTN4-201ENST00000317610 G3V3Y1 287 aa16.43■□□□□ 0.22
RTN4-201ENST00000317610 CBR3O75828 277 aa16.43■□□□□ 0.22
RTN4-201ENST00000317610 EPHA1P21709 976 aa16.43■□□□□ 0.22
RTN4-201ENST00000317610 SSR4P51571 173 aa16.43■□□□□ 0.22
RTN4-201ENST00000317610 B3GALT5-AS1P59052 145 aa16.43■□□□□ 0.22
RTN4-201ENST00000317610 FOXO1Q12778 655 aa16.43■□□□□ 0.22
RTN4-201ENST00000317610 ZNF611Q8N823 705 aa16.43■□□□□ 0.22
RTN4-201ENST00000317610 CLDND2Q8NHS1 167 aa16.43■□□□□ 0.22
RTN4-201ENST00000317610 PIGCQ92535 297 aa16.43■□□□□ 0.22
RTN4-201ENST00000317610 EXTL1Q92935 676 aa16.43■□□□□ 0.22
RTN4-201ENST00000317610 TVP23CQ96ET8 276 aa16.43■□□□□ 0.22
RTN4-201ENST00000317610 JSRP1Q96MG2 331 aaPredicted RBP16.43■□□□□ 0.22
RTN4-201ENST00000317610 MAGT1Q9H0U3 335 aa16.43■□□□□ 0.22
RTN4-201ENST00000317610 Q9N2K0 584 aa16.43■□□□□ 0.22
RTN4-201ENST00000317610 CXCL1P09341 107 aa16.42■□□□□ 0.22
RTN4-201ENST00000317610 COX6A1P12074 109 aa16.42■□□□□ 0.22
RTN4-201ENST00000317610 VDAC1P21796 283 aa16.42■□□□□ 0.22
RTN4-201ENST00000317610 ZNF818PQ6ZRF7 136 aa16.42■□□□□ 0.22
RTN4-201ENST00000317610 SLC35E3Q7Z769 313 aa16.42■□□□□ 0.22
RTN4-201ENST00000317610 CYB561D1Q8N8Q1 229 aa16.42■□□□□ 0.22
RTN4-201ENST00000317610 ZNF610Q8N9Z0 462 aa16.42■□□□□ 0.22
RTN4-201ENST00000317610 DOK5Q9P104 306 aa16.42■□□□□ 0.22
RTN4-201ENST00000317610 WSB1Q9Y6I7 421 aa16.42■□□□□ 0.22
RTN4-201ENST00000317610 WRBO00258 174 aa16.42■□□□□ 0.22
RTN4-201ENST00000317610 TUSC2O75896 110 aa16.42■□□□□ 0.22
RTN4-201ENST00000317610 NAPSAO96009 420 aa16.42■□□□□ 0.22
RTN4-201ENST00000317610 HBE1P02100 147 aa16.42■□□□□ 0.22
RTN4-201ENST00000317610 TK1P04183 234 aa16.42■□□□□ 0.22
RTN4-201ENST00000317610 UMODP07911 640 aa16.42■□□□□ 0.22
RTN4-201ENST00000317610 EDN3P14138 238 aa16.42■□□□□ 0.22
RTN4-201ENST00000317610 NPBWR2P48146 333 aa16.42■□□□□ 0.22
RTN4-201ENST00000317610 SLC25A26Q70HW3 274 aa16.42■□□□□ 0.22
RTN4-201ENST00000317610 IL22RA1Q8N6P7 574 aa16.42■□□□□ 0.22
RTN4-201ENST00000317610 OR10G4Q8NGN3 311 aa16.42■□□□□ 0.22
RTN4-201ENST00000317610 FGFBP3Q8TAT2 258 aa16.42■□□□□ 0.22
RTN4-201ENST00000317610 M1APQ8TC57 530 aa16.42■□□□□ 0.22
RTN4-201ENST00000317610 FOXB1Q99853 325 aa16.42■□□□□ 0.22
RTN4-201ENST00000317610 DUSP23Q9BVJ7 150 aa16.42■□□□□ 0.22
RTN4-201ENST00000317610 MYO15AQ9UKN7 3530 aa16.42■□□□□ 0.22
RTN4-201ENST00000317610 ZNF729A6NN14 1252 aaPredicted RBP16.41■□□□□ 0.22
RTN4-201ENST00000317610 PCBD1P61457 104 aa16.41■□□□□ 0.22
RTN4-201ENST00000317610 OR8G1Q15617 311 aa16.41■□□□□ 0.22
RTN4-201ENST00000317610 KHDC3LQ587J8 217 aa16.41■□□□□ 0.22
RTN4-201ENST00000317610 PYY3Q5JQD4 70 aa16.41■□□□□ 0.22
RTN4-201ENST00000317610 SPIN3Q5JUX0 258 aa16.41■□□□□ 0.22
RTN4-201ENST00000317610 AKR1C8PQ5T2L2 129 aa16.41■□□□□ 0.22
RTN4-201ENST00000317610 GAPTQ8N292 157 aa16.41■□□□□ 0.22
RTN4-201ENST00000317610 IL22RA2Q969J5 263 aa16.41■□□□□ 0.22
RTN4-201ENST00000317610 ALKBH3Q96Q83 286 aaPredicted RBP16.41■□□□□ 0.22
RTN4-201ENST00000317610 PARPBPQ9NWS1 579 aa16.41■□□□□ 0.22
RTN4-201ENST00000317610 OCIAD1Q9NX40 245 aa16.41■□□□□ 0.22
RTN4-201ENST00000317610 MRPS17Q9Y2R5 130 aaKnown RBP16.41■□□□□ 0.22
RTN4-201ENST00000317610 TRBV23-1A0A0A0MS06 115 aa16.41■□□□□ 0.22
RTN4-201ENST00000317610 TRAV1-1A0A0B4J248 108 aa16.41■□□□□ 0.22
RTN4-201ENST00000317610 SLC22A20A6NK97 555 aa16.41■□□□□ 0.22
RTN4-201ENST00000317610 CST7O76096 145 aa16.41■□□□□ 0.22
RTN4-201ENST00000317610 FGF5P12034 268 aa16.41■□□□□ 0.22
RTN4-201ENST00000317610 GLIPR1P48060 266 aa16.41■□□□□ 0.22
RTN4-201ENST00000317610 CLDN15P56746 228 aa16.41■□□□□ 0.22
RTN4-201ENST00000317610 ERVFRD-1P60508 538 aa16.41■□□□□ 0.22
RTN4-201ENST00000317610 TLE4Q04727 773 aa16.41■□□□□ 0.22
RTN4-201ENST00000317610 IL24Q13007 206 aa16.41■□□□□ 0.22
RTN4-201ENST00000317610 OR2B11Q5JQS5 317 aa16.41■□□□□ 0.22
RTN4-201ENST00000317610 ZNF343Q6P1L6 599 aa16.41■□□□□ 0.22
RTN4-201ENST00000317610 AAED1Q7RTV5 226 aa16.41■□□□□ 0.22
RTN4-201ENST00000317610 CPNE4Q96A23 557 aaPredicted RBP16.41■□□□□ 0.22
RTN4-201ENST00000317610 ATP5SQ99766 215 aa16.41■□□□□ 0.22
RTN4-201ENST00000317610 NIPSNAP3BQ9BS92 247 aa16.41■□□□□ 0.22
RTN4-201ENST00000317610 RNF115Q9Y4L5 304 aa16.41■□□□□ 0.22
RTN4-201ENST00000317610 ZNF587BE7ETH6 402 aa16.4■□□□□ 0.22
RTN4-201ENST00000317610 EPHA8P29322 1005 aaPredicted RBP16.4■□□□□ 0.22
RTN4-201ENST00000317610 NDUFA6P56556 154 aa16.4■□□□□ 0.22
RTN4-201ENST00000317610 TAS2R30P59541 319 aa16.4■□□□□ 0.22
RTN4-201ENST00000317610 RUNX1Q01196 453 aa16.4■□□□□ 0.22
RTN4-201ENST00000317610 ZNF674Q2M3X9 581 aa16.4■□□□□ 0.22
RTN4-201ENST00000317610 RIPPLY2Q5TAB7 128 aa16.4■□□□□ 0.22
RTN4-201ENST00000317610 OR5D13Q8NGL4 314 aa16.4■□□□□ 0.22
RTN4-201ENST00000317610 C1QTNF5Q9BXJ0 243 aa16.4■□□□□ 0.22
RTN4-201ENST00000317610 TREM2Q9NZC2 230 aa16.4■□□□□ 0.22
RTN4-201ENST00000317610 IGKV1D-13A0A0B4J2D9 117 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms