RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 TMEM30CPA0ZSE6 113 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 UBE2QL1A1L167 161 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 DNAJC9-AS1A6NH13 148 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 AIPO00170 330 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 SLC17A2O00624 439 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 HOXA3O43365 443 aaPredicted RBP5.35□□□□□ -1.55
CD44-204ENST00000279452 VENTXO95231 258 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 BPNT1O95861 308 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 IGHV1-8P0DP01 117 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 VSIG8P0DPA2 414 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 RAB3BP20337 219 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 OMGP23515 440 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 PRTN3P24158 256 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 GADD45AP24522 165 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 CDK2P24941 298 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 LMO1P25800 156 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 ERP29P30040 261 aaKnown RBP5.35□□□□□ -1.55
CD44-204ENST00000279452 SAA4P35542 130 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 RANBP1P43487 201 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 PSMD7P51665 324 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 GP2P55259 537 aaKnown RBP5.35□□□□□ -1.55
CD44-204ENST00000279452 OR10A3P58181 314 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 BPIFB3P59826 476 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 HILS1P60008 231 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 MXD1Q05195 221 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 RBM39Q14498 530 aaKnown RBP5.35□□□□□ -1.55
CD44-204ENST00000279452 PLA1AQ53H76 456 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 TCF23Q7RTU1 214 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 PRR18Q8N4B5 295 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 ZNF565Q8N9K5 539 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 TMEM104Q8NE00 496 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 OR51D1Q8NGF3 324 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 KCNG3Q8TAE7 436 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 NDNFQ8TB73 568 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 PLPPR1Q8TBJ4 325 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 SETD6Q8TBK2 473 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 CCDC107Q8WV48 283 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 MRPS24Q96EL2 167 aaKnown RBP5.35□□□□□ -1.55
CD44-204ENST00000279452 COQ2Q96H96 371 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 DMRTB1Q96MA1 342 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 ZNF48Q96MX3 618 aaPredicted RBP5.35□□□□□ -1.55
CD44-204ENST00000279452 NEDD4LQ96PU5 975 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 URM1Q9BTM9 101 aaKnown RBP5.35□□□□□ -1.55
CD44-204ENST00000279452 OR51E2Q9H255 320 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 SEBOXQ9HB31 216 aaPredicted RBP5.35□□□□□ -1.55
CD44-204ENST00000279452 CHMP1AQ9HD42 196 aaPredicted RBP5.35□□□□□ -1.55
CD44-204ENST00000279452 TXNL4BQ9NX01 149 aaKnown RBP5.35□□□□□ -1.55
CD44-204ENST00000279452 ETAA1Q9NY74 926 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 OR6C3Q9NZP0 311 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 STEAP1Q9UHE8 339 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 TRAPPC2LQ9UL33 140 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 UBE2J1Q9Y385 318 aaPredicted RBP5.35□□□□□ -1.55
CD44-204ENST00000279452 PEX16Q9Y5Y5 336 aa5.35□□□□□ -1.55
CD44-204ENST00000279452 A0A075B6Q4 140 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 A0A0A6YYJ9 748 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 TRAV1-2A0A0B4J238 106 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 ZNF729A6NN14 1252 aaPredicted RBP5.34□□□□□ -1.55
CD44-204ENST00000279452 C17orf98A8MV24 154 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 H3BUI4 141 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 TOR1AO14656 332 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 SLC22A1O15245 554 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 PDCD6O75340 191 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 CSN2P05814 226 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 FBP1P09467 338 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 GALP22466 123 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 BLVRBP30043 206 aaPredicted RBP5.34□□□□□ -1.55
CD44-204ENST00000279452 KCNJ3P48549 501 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 GNG10P50151 68 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 UBE2E1P51965 193 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 LSM3P62310 102 aaKnown RBP5.34□□□□□ -1.55
CD44-204ENST00000279452 RPS27AP62979 156 aaKnown RBP5.34□□□□□ -1.55
CD44-204ENST00000279452 UBA52P62987 128 aaKnown RBP5.34□□□□□ -1.55
CD44-204ENST00000279452 KRTAP24-1Q3LI83 254 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 TIMM50Q3ZCQ8 353 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 NHLRC3Q5JS37 347 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 C1orf100Q5SVJ3 147 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 SYT6Q5T7P8 510 aaPredicted RBP5.34□□□□□ -1.55
CD44-204ENST00000279452 RSBN1Q5VWQ0 802 aaPredicted RBP5.34□□□□□ -1.55
CD44-204ENST00000279452 OR52W1Q6IF63 320 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 CD200R1LQ6Q8B3 271 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 C1orf122Q6ZSJ8 110 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 C9orf139Q6ZV77 190 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 USP43Q70EL4 1123 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.34□□□□□ -1.55
CD44-204ENST00000279452 OR13A1Q8NGR1 328 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 OR4K15Q8NH41 348 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 UBALD1Q8TB05 177 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 DYRK2Q92630 601 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 SLC25A28Q96A46 364 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 FAM3DQ96BQ1 224 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 Q96M66 194 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 C1orf147Q96MC9 270 aaPredicted RBP5.34□□□□□ -1.55
CD44-204ENST00000279452 KCTD7Q96MP8 289 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 GFI1Q99684 422 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 NICN1Q9BSH3 213 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 C19orf24Q9BVV8 132 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 CLEC7AQ9BXN2 247 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 TMEM133Q9H2Q1 129 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 ZNF696Q9H7X3 374 aa5.34□□□□□ -1.55
CD44-204ENST00000279452 LIN7BQ9HAP6 207 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms