RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 RNF114Q9Y508 228 aa13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 TRAV34A0A0B4J273 112 aa13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 IGHV1OR15-9A0A0B4J2B8 117 aa13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 BPNT1O95861 308 aa13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 GRK6P43250 576 aa13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 ZNF41P51814 821 aaPredicted RBP13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 ZNF74Q16587 644 aa13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 LDLRAD2Q5SZI1 272 aa13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 GRINAQ7Z429 371 aa13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 TGIF2LYQ8IUE0 185 aa13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 TMEM217Q8N7C4 229 aa13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 CDRT4Q8N9R6 151 aa13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 G6PC2Q9NQR9 355 aa13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 CLDN16Q9Y5I7 305 aa13.65□□□□□ -0.22
CTDSP1-201ENST00000273062 CRYM-AS1A6NIL9 109 aa13.64□□□□□ -0.23
CTDSP1-201ENST00000273062 FBXW12Q6X9E4 464 aa13.64□□□□□ -0.23
CTDSP1-201ENST00000273062 LHFPL4Q7Z7J7 247 aa13.64□□□□□ -0.23
CTDSP1-201ENST00000273062 GATSQ8NAP1 163 aa13.64□□□□□ -0.23
CTDSP1-201ENST00000273062 SUMF1Q8NBK3 374 aa13.64□□□□□ -0.23
CTDSP1-201ENST00000273062 KLHDC3Q9BQ90 382 aa13.64□□□□□ -0.23
CTDSP1-201ENST00000273062 LIME1Q9H400 295 aa13.64□□□□□ -0.23
CTDSP1-201ENST00000273062 FREM3P0C091 2139 aa13.64□□□□□ -0.23
CTDSP1-201ENST00000273062 TRIOBPQ9H2D6 2365 aa13.64□□□□□ -0.23
CTDSP1-201ENST00000273062 GRIFINA4D1Z8 144 aa13.64□□□□□ -0.23
CTDSP1-201ENST00000273062 CST7O76096 145 aa13.64□□□□□ -0.23
CTDSP1-201ENST00000273062 TOMM40O96008 361 aa13.64□□□□□ -0.23
CTDSP1-201ENST00000273062 CSNK1A1P48729 337 aa13.64□□□□□ -0.23
CTDSP1-201ENST00000273062 SLC18B1Q6NT16 456 aa13.64□□□□□ -0.23
CTDSP1-201ENST00000273062 GLIPR1L1Q6UWM5 242 aa13.64□□□□□ -0.23
CTDSP1-201ENST00000273062 SYT13Q7L8C5 426 aa13.64□□□□□ -0.23
CTDSP1-201ENST00000273062 OR4C5Q8NGB2 326 aa13.64□□□□□ -0.23
CTDSP1-201ENST00000273062 RBMXL1Q96E39 390 aaKnown RBP13.64□□□□□ -0.23
CTDSP1-201ENST00000273062 CTDSP1Q9GZU7 261 aa13.64□□□□□ -0.23
CTDSP1-201ENST00000273062 OR6C3Q9NZP0 311 aa13.64□□□□□ -0.23
CTDSP1-201ENST00000273062 SPACA6W5XKT8 324 aa13.64□□□□□ -0.23
CTDSP1-201ENST00000273062 C17orf105B2RV13 164 aa13.63□□□□□ -0.23
CTDSP1-201ENST00000273062 SRSF10O75494 262 aaKnown RBP13.63□□□□□ -0.23
CTDSP1-201ENST00000273062 BCL2P10415 239 aa13.63□□□□□ -0.23
CTDSP1-201ENST00000273062 HOXC12P31275 282 aa13.63□□□□□ -0.23
CTDSP1-201ENST00000273062 COMPP49747 757 aaPredicted RBP13.63□□□□□ -0.23
CTDSP1-201ENST00000273062 GFERP55789 205 aa13.63□□□□□ -0.23
CTDSP1-201ENST00000273062 LINC01551Q86U37 167 aa13.63□□□□□ -0.23
CTDSP1-201ENST00000273062 OR10G4Q8NGN3 311 aa13.63□□□□□ -0.23
CTDSP1-201ENST00000273062 LMX1AQ8TE12 382 aa13.63□□□□□ -0.23
CTDSP1-201ENST00000273062 TOMM40LQ969M1 308 aa13.63□□□□□ -0.23
CTDSP1-201ENST00000273062 CTHRC1Q96CG8 243 aa13.63□□□□□ -0.23
CTDSP1-201ENST00000273062 ZNF552Q9H707 407 aaPredicted RBP13.63□□□□□ -0.23
CTDSP1-201ENST00000273062 ZNF160Q9HCG1 818 aa13.63□□□□□ -0.23
CTDSP1-201ENST00000273062 DMDP11532 3685 aa13.63□□□□□ -0.23
CTDSP1-201ENST00000273062 C11orf98E9PRG8 122 aa13.63□□□□□ -0.23
CTDSP1-201ENST00000273062 OR3A4PP47883 348 aa13.63□□□□□ -0.23
CTDSP1-201ENST00000273062 SLC22A24Q8N4F4 322 aa13.63□□□□□ -0.23
CTDSP1-201ENST00000273062 ZNF709Q8N972 641 aa13.63□□□□□ -0.23
CTDSP1-201ENST00000273062 OR5C1Q8NGR4 320 aa13.63□□□□□ -0.23
CTDSP1-201ENST00000273062 C1orf147Q96MC9 270 aaPredicted RBP13.63□□□□□ -0.23
CTDSP1-201ENST00000273062 ABCA7Q8IZY2 2146 aa13.63□□□□□ -0.23
CTDSP1-201ENST00000273062 LRRC3CA6NJW4 275 aa13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 HSPB2A8KAH6 182 aa13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 J3QW42 95 aa13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 FOXS1O43638 330 aa13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 RENP00797 406 aa13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 TMEM225BP0DP42 221 aa13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 MLF1P58340 268 aa13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 EGR4Q05215 589 aa13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 HSPB2Q16082 182 aa13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 DEFB133Q30KQ1 61 aa13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 ACOT6Q3I5F7 207 aaPredicted RBP13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 LCN15Q6UWW0 184 aa13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 TMPRSS7Q7RTY8 843 aa13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 DAZLQ92904 295 aaKnown RBP13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 MOB3AQ96BX8 217 aa13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 MMP25Q9NPA2 562 aa13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 COX11Q9Y6N1 276 aa13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 H7BYZ3 331 aa13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 ST8SIA3O43173 380 aa13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 SRFP11831 508 aa13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 SFTPDP35247 375 aa13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 PIGPP57054 158 aa13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 ROM1Q03395 351 aa13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 ZNF266Q14584 549 aa13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 FBLN7Q53RD9 439 aa13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 OR2C3Q8N628 320 aa13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 RNF2Q99496 336 aa13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 ELL3Q9HB65 397 aaPredicted RBP13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 B3GALT1Q9Y5Z6 326 aa13.62□□□□□ -0.23
CTDSP1-201ENST00000273062 SLC16A7O60669 478 aa13.61□□□□□ -0.23
CTDSP1-201ENST00000273062 CTLA4P16410 223 aa13.61□□□□□ -0.23
CTDSP1-201ENST00000273062 LINC00310P59036 64 aa13.61□□□□□ -0.23
CTDSP1-201ENST00000273062 S100A7AQ86SG5 101 aa13.61□□□□□ -0.23
CTDSP1-201ENST00000273062 LINC00346Q8IVM7 164 aa13.61□□□□□ -0.23
CTDSP1-201ENST00000273062 ODF3L1Q8IXM7 274 aa13.61□□□□□ -0.23
CTDSP1-201ENST00000273062 MAGT1Q9H0U3 335 aa13.61□□□□□ -0.23
CTDSP1-201ENST00000273062 VSIRQ9H7M9 311 aa13.61□□□□□ -0.23
CTDSP1-201ENST00000273062 TMEM9BQ9NQ34 198 aa13.61□□□□□ -0.23
CTDSP1-201ENST00000273062 PCDH15Q96QU1 1955 aa13.61□□□□□ -0.23
CTDSP1-201ENST00000273062 IGHV2-70DA0A0C4DH43 119 aa13.61□□□□□ -0.23
CTDSP1-201ENST00000273062 A0A1W2PNV4 684 aa13.61□□□□□ -0.23
CTDSP1-201ENST00000273062 MAP1LC3B2A6NCE7 125 aa13.61□□□□□ -0.23
CTDSP1-201ENST00000273062 ZNF93P35789 620 aaPredicted RBP13.61□□□□□ -0.23
CTDSP1-201ENST00000273062 HINT1P49773 126 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms