RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 KLK10O43240 276 aa11.01□□□□□ -0.65
SPTLC1-201ENST00000262554 TPT1P13693 172 aaKnown RBP11.01□□□□□ -0.65
SPTLC1-201ENST00000262554 ZNF44P15621 663 aa11.01□□□□□ -0.65
SPTLC1-201ENST00000262554 TUBG1P23258 451 aa11.01□□□□□ -0.65
SPTLC1-201ENST00000262554 NAAAQ02083 359 aa11.01□□□□□ -0.65
SPTLC1-201ENST00000262554 SNTB1Q13884 538 aaKnown RBP11.01□□□□□ -0.65
SPTLC1-201ENST00000262554 OR8G1Q15617 311 aa11.01□□□□□ -0.65
SPTLC1-201ENST00000262554 WDR86Q86TI4 376 aa11.01□□□□□ -0.65
SPTLC1-201ENST00000262554 CXorf67Q86X51 503 aaPredicted RBP11.01□□□□□ -0.65
SPTLC1-201ENST00000262554 FOXRED2Q8IWF2 684 aa11.01□□□□□ -0.65
SPTLC1-201ENST00000262554 OR11L1Q8NGX0 322 aa11.01□□□□□ -0.65
SPTLC1-201ENST00000262554 KLF14Q8TD94 323 aaPredicted RBP11.01□□□□□ -0.65
SPTLC1-201ENST00000262554 SHARPINQ9H0F6 387 aa11.01□□□□□ -0.65
SPTLC1-201ENST00000262554 OBP2BQ9NPH6 170 aa11.01□□□□□ -0.65
SPTLC1-201ENST00000262554 TUBG2Q9NRH3 451 aa11.01□□□□□ -0.65
SPTLC1-201ENST00000262554 MBD3L4A6NDZ8 208 aaPredicted RBP11□□□□□ -0.65
SPTLC1-201ENST00000262554 MBD3L3A6NE82 208 aaPredicted RBP11□□□□□ -0.65
SPTLC1-201ENST00000262554 MBD3L5A6NJ08 208 aaPredicted RBP11□□□□□ -0.65
SPTLC1-201ENST00000262554 TMEM210A6NLX4 147 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 TNFSF13O75888 250 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 SRPXP78539 464 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 P2RY6Q15077 328 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 PAN3Q58A45 887 aaKnown RBP11□□□□□ -0.65
SPTLC1-201ENST00000262554 FAM74A1Q5RGS3 127 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 ZNF610Q8N9Z0 462 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 MBD3L2Q8NHZ7 208 aaPredicted RBP11□□□□□ -0.65
SPTLC1-201ENST00000262554 GLYATL2Q8WU03 294 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 STARD4Q96DR4 205 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 C18orf12Q96KH6 178 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 DMRTA2Q96SC8 542 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 TMEM100Q9NV29 134 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 CACNA1GO43497 2377 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 SHANK1Q9Y566 2161 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11□□□□□ -0.65
SPTLC1-201ENST00000262554 C3orf85A0A1B0GTC6 90 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 MSGN1A6NI15 193 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 H7C1Q1 480 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 MPPED1O15442 326 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 PHF1O43189 567 aaPredicted RBP11□□□□□ -0.65
SPTLC1-201ENST00000262554 ZNF250P15622 560 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 GNRHRP30968 328 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 MPV17P39210 176 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 MDH2P40926 338 aaKnown RBP11□□□□□ -0.65
SPTLC1-201ENST00000262554 HERPUD1Q15011 391 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 IGFBP7Q16270 282 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 ALKBH6Q3KRA9 238 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 SPIN3Q5JUX0 258 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 Q6P435 159 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 Q6ZS92 163 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 BEND4Q6ZU67 534 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 BHLHA15Q7RTS1 189 aaPredicted RBP11□□□□□ -0.65
SPTLC1-201ENST00000262554 OR4A4PQ8NGN8 299 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 LRRC20Q8TCA0 184 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 SECTM1Q8WVN6 248 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 MSI2Q96DH6 328 aaKnown RBP11□□□□□ -0.65
SPTLC1-201ENST00000262554 OPN3Q9H1Y3 402 aaPredicted RBP11□□□□□ -0.65
SPTLC1-201ENST00000262554 ZC4H2Q9NQZ6 224 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 ZNF71Q9NQZ8 489 aaPredicted RBP11□□□□□ -0.65
SPTLC1-201ENST00000262554 PCDHB10Q9UN67 800 aa11□□□□□ -0.65
SPTLC1-201ENST00000262554 GPR31O00270 319 aa10.99□□□□□ -0.65
SPTLC1-201ENST00000262554 CDIPTO14735 213 aa10.99□□□□□ -0.65
SPTLC1-201ENST00000262554 DEDDO75618 318 aa10.99□□□□□ -0.65
SPTLC1-201ENST00000262554 TUSC2O75896 110 aa10.99□□□□□ -0.65
SPTLC1-201ENST00000262554 NXPH2O95156 264 aa10.99□□□□□ -0.65
SPTLC1-201ENST00000262554 CGAP01215 116 aa10.99□□□□□ -0.65
SPTLC1-201ENST00000262554 CRYABP02511 175 aaKnown RBP10.99□□□□□ -0.65
SPTLC1-201ENST00000262554 CECR9P0C854 216 aa10.99□□□□□ -0.65
SPTLC1-201ENST00000262554 PGA5P0DJD9 388 aa10.99□□□□□ -0.65
SPTLC1-201ENST00000262554 ERVK11-1P61568 191 aa10.99□□□□□ -0.65
SPTLC1-201ENST00000262554 RND3P61587 244 aa10.99□□□□□ -0.65
SPTLC1-201ENST00000262554 ZNF154Q13106 437 aa10.99□□□□□ -0.65
SPTLC1-201ENST00000262554 ZNF880Q6PDB4 577 aa10.99□□□□□ -0.65
SPTLC1-201ENST00000262554 LYZL2Q7Z4W2 148 aa10.99□□□□□ -0.65
SPTLC1-201ENST00000262554 HSD17B13Q7Z5P4 300 aaPredicted RBP10.99□□□□□ -0.65
SPTLC1-201ENST00000262554 FAM219AQ8IW50 185 aa10.99□□□□□ -0.65
SPTLC1-201ENST00000262554 BAP18Q8IXM2 172 aa10.99□□□□□ -0.65
SPTLC1-201ENST00000262554 OR8G5Q8NG78 346 aa10.99□□□□□ -0.65
SPTLC1-201ENST00000262554 SNIP1Q8TAD8 396 aaKnown RBP10.99□□□□□ -0.65
SPTLC1-201ENST00000262554 NRIP2Q9BQI9 281 aa10.99□□□□□ -0.65
SPTLC1-201ENST00000262554 BCL2L14Q9BZR8 327 aa10.99□□□□□ -0.65
SPTLC1-201ENST00000262554 SLC5A7Q9GZV3 580 aa10.99□□□□□ -0.65
SPTLC1-201ENST00000262554 CYTL1Q9NRR1 136 aa10.99□□□□□ -0.65
SPTLC1-201ENST00000262554 ZFP57Q9NU63 452 aa10.99□□□□□ -0.65
SPTLC1-201ENST00000262554 TREM2Q9NZC2 230 aa10.99□□□□□ -0.65
SPTLC1-201ENST00000262554 PURGQ9UJV8 347 aaKnown RBP10.99□□□□□ -0.65
SPTLC1-201ENST00000262554 LSM5Q9Y4Y9 91 aaKnown RBP10.99□□□□□ -0.65
SPTLC1-201ENST00000262554 GTF3C1Q12789 2109 aa10.99□□□□□ -0.65
SPTLC1-201ENST00000262554 K7EPK0 472 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 SH2D1BO14796 132 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 TAAR5O14804 337 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 SCGB1D2O95969 90 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 GRPP07492 148 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 GLI4P10075 376 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 KCNJ3P48549 501 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 HLA-DRB3P79483 266 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 EIF2S3LQ2VIR3 472 aaKnown RBP10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 FIP1L1Q6UN15 594 aaKnown RBP10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 C20orf204Q6ZNR8 217 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 MOB1BQ7L9L4 216 aa10.98□□□□□ -0.65
SPTLC1-201ENST00000262554 C5orf24Q7Z6I8 188 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms