RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 OPN3Q9H1Y3 402 aaPredicted RBP11.65□□□□□ -0.54
COL1A1-201ENST00000225964 PHOX2AO14813 284 aa11.65□□□□□ -0.55
COL1A1-201ENST00000225964 SULT1A1P50225 295 aa11.65□□□□□ -0.55
COL1A1-201ENST00000225964 CEBPEQ15744 281 aa11.65□□□□□ -0.55
COL1A1-201ENST00000225964 TSPO2Q5TGU0 170 aa11.65□□□□□ -0.55
COL1A1-201ENST00000225964 SH2D5Q6ZV89 423 aa11.65□□□□□ -0.55
COL1A1-201ENST00000225964 VN1R4Q7Z5H5 301 aa11.65□□□□□ -0.55
COL1A1-201ENST00000225964 SSMEM1Q8WWF3 244 aa11.65□□□□□ -0.55
COL1A1-201ENST00000225964 IL22RA2Q969J5 263 aa11.65□□□□□ -0.55
COL1A1-201ENST00000225964 SLC2A9Q9NRM0 540 aa11.65□□□□□ -0.55
COL1A1-201ENST00000225964 ASPDHA6ND91 283 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 P01737 135 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 COL19A1Q14993 1142 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 MMDQ15546 238 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 PERPQ96FX8 193 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 UCN2Q96RP3 112 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 SIRT5Q9NXA8 310 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 COLQQ9Y215 455 aaPredicted RBP11.64□□□□□ -0.55
COL1A1-201ENST00000225964 HILPDAQ9Y5L2 63 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 GLI3P10071 1580 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 A0A1W2PPE3 182 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 ALX3O95076 343 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 SLC6A1P30531 599 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 POLR2GP62487 172 aaKnown RBP eCLIP11.64□□□□□ -0.55
COL1A1-201ENST00000225964 IZUMO4Q1ZYL8 232 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 DCAF10Q5QP82 559 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 FAM222BQ8WU58 562 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 TCL1AP56279 114 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 AESQ08117 197 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 ZIC1Q15915 447 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 ST3GAL2Q16842 350 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 MESTQ5EB52 335 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 NSUN5P2Q63ZY6 315 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 MUC20Q8N307 709 aaPredicted RBP11.64□□□□□ -0.55
COL1A1-201ENST00000225964 ADAMTS17Q8TE56 1095 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 SRD5A3Q9H8P0 318 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 PIPOXQ9P0Z9 390 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 WSB1Q9Y6I7 421 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 RREB1Q92766 1687 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 PPIAL4EA0A075B759 164 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 PRSS44E7EML9 344 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 PPIAL4DF5H284 164 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 KCNAB3O43448 404 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 PPIAL4FP0DN26 164 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 DHRS2Q13268 280 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 SCGB1D4Q6XE38 83 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 ZNF841Q6ZN19 808 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 MANBALQ9NQG1 85 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 LPAR3Q9UBY5 353 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 PPIAL4AQ9Y536 164 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 A0A1W2PQD3 144 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 TMEM210A6NLX4 147 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 TO15178 435 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 CRISP2P16562 243 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 KIR2DL1P43626 348 aaPredicted RBP11.64□□□□□ -0.55
COL1A1-201ENST00000225964 KIR2DL2P43627 348 aaPredicted RBP11.64□□□□□ -0.55
COL1A1-201ENST00000225964 INO80CQ6PI98 192 aaPredicted RBP11.64□□□□□ -0.55
COL1A1-201ENST00000225964 ZNF680Q8NEM1 530 aa11.64□□□□□ -0.55
COL1A1-201ENST00000225964 TRAV34A0A0B4J273 112 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 PRR35P0CG20 571 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 WNT5AP41221 380 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 ZNF273Q14593 569 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 CD226Q15762 336 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 FAM219AQ8IW50 185 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 FADS6Q8N9I5 356 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 PIMREGQ9BSJ6 248 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 CSF2RBP32927 897 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 ROM1Q03395 351 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 Q6ZN92 141 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 NHSL1Q5SYE7 1610 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 TBX19O60806 448 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 RIGQ13278 110 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 KHDC3LQ587J8 217 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 HSD17B13Q7Z5P4 300 aaPredicted RBP11.63□□□□□ -0.55
COL1A1-201ENST00000225964 OR1L6Q8NGR2 347 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 OR10AC1Q8NH08 325 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 FGF11Q92914 225 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 STARD4Q96DR4 205 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 IGSF23A1L1A6 192 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 CIDEAO60543 219 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 PPOXP50336 477 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 SLC35B1P78383 322 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 PMS2P11Q13670 270 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 GAB4Q2WGN9 574 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 ZNF770Q6IQ21 691 aaPredicted RBP11.63□□□□□ -0.55
COL1A1-201ENST00000225964 OR10C1Q96KK4 312 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 SEC11CQ9BY50 192 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 FLRT3Q9NZU0 649 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 HRKO00198 91 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 INHBBP09529 407 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 LIFP15018 202 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 KIR3DL2P43630 455 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 PIGYQ3MUY2 71 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 LYRM7Q5U5X0 104 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 CCDC144NLQ6NUI1 221 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 GAPTQ8N292 157 aa11.63□□□□□ -0.55
COL1A1-201ENST00000225964 MFNGO00587 321 aa11.62□□□□□ -0.55
COL1A1-201ENST00000225964 HLA-GP17693 338 aa11.62□□□□□ -0.55
COL1A1-201ENST00000225964 ANKRD55Q3KP44 614 aa11.62□□□□□ -0.55
COL1A1-201ENST00000225964 SMRP1Q8NCR6 262 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms