RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 USP17L3A6NCW0 530 aa15.7■□□□□ 0.1
PHGDH-220ENST00000641570 USP17L4A6NCW7 530 aa15.7■□□□□ 0.1
PHGDH-220ENST00000641570 IL1R1P14778 569 aa15.7■□□□□ 0.1
PHGDH-220ENST00000641570 GTF2IP78347 998 aa15.7■□□□□ 0.1
PHGDH-220ENST00000641570 MAP3K12Q12852 859 aa15.7■□□□□ 0.1
PHGDH-220ENST00000641570 RASGRF1Q13972 1273 aa15.7■□□□□ 0.1
PHGDH-220ENST00000641570 TTC22Q5TAA0 569 aa15.7■□□□□ 0.1
PHGDH-220ENST00000641570 TTLL5Q6EMB2 1281 aa15.7■□□□□ 0.1
PHGDH-220ENST00000641570 USP17L1Q7RTZ2 530 aa15.7■□□□□ 0.1
PHGDH-220ENST00000641570 DZIP1Q86YF9 867 aaKnown RBP15.7■□□□□ 0.1
PHGDH-220ENST00000641570 SLF2Q8IX21 1173 aa15.7■□□□□ 0.1
PHGDH-220ENST00000641570 EVI5LQ96CN4 794 aa15.7■□□□□ 0.1
PHGDH-220ENST00000641570 HAUS7Q99871 368 aa15.7■□□□□ 0.1
PHGDH-220ENST00000641570 NOL10Q9BSC4 688 aaKnown RBP15.7■□□□□ 0.1
PHGDH-220ENST00000641570 RAI14Q9P0K7 980 aa15.7■□□□□ 0.1
PHGDH-220ENST00000641570 HIP1O00291 1037 aa15.69■□□□□ 0.1
PHGDH-220ENST00000641570 IDH1O75874 414 aaKnown RBP15.69■□□□□ 0.1
PHGDH-220ENST00000641570 MAP4K4O95819 1239 aaPredicted RBP15.69■□□□□ 0.1
PHGDH-220ENST00000641570 MCAMP43121 646 aa15.69■□□□□ 0.1
PHGDH-220ENST00000641570 ERICH6Q7L0X2 663 aa15.69■□□□□ 0.1
PHGDH-220ENST00000641570 TXNRD3Q86VQ6 643 aa15.69■□□□□ 0.1
PHGDH-220ENST00000641570 TDRD7Q8NHU6 1098 aaKnown RBP15.69■□□□□ 0.1
PHGDH-220ENST00000641570 BRCA1P38398 1863 aaKnown RBP15.69■□□□□ 0.1
PHGDH-220ENST00000641570 MAST3O60307 1309 aa15.68■□□□□ 0.1
PHGDH-220ENST00000641570 PDS5AQ29RF7 1337 aaKnown RBP15.68■□□□□ 0.1
PHGDH-220ENST00000641570 MYO3BQ8WXR4 1341 aa15.68■□□□□ 0.1
PHGDH-220ENST00000641570 ARFGEF1Q9Y6D6 1849 aa15.68■□□□□ 0.1
PHGDH-220ENST00000641570 DUOX1Q9NRD9 1551 aa15.68■□□□□ 0.1
PHGDH-220ENST00000641570 WTIPA6NIX2 430 aaPredicted RBP15.68■□□□□ 0.1
PHGDH-220ENST00000641570 EIF5BO60841 1220 aaKnown RBP15.68■□□□□ 0.1
PHGDH-220ENST00000641570 LDHBP07195 334 aaKnown RBP15.68■□□□□ 0.1
PHGDH-220ENST00000641570 ZAP70P43403 619 aa15.68■□□□□ 0.1
PHGDH-220ENST00000641570 GSTO1P78417 241 aa15.68■□□□□ 0.1
PHGDH-220ENST00000641570 MFSD14BQ5SR56 506 aa15.68■□□□□ 0.1
PHGDH-220ENST00000641570 C9orf131Q5VYM1 1079 aa15.68■□□□□ 0.1
PHGDH-220ENST00000641570 CIAPIN1Q6FI81 312 aa15.68■□□□□ 0.1
PHGDH-220ENST00000641570 DIAPH3Q9NSV4 1193 aa15.68■□□□□ 0.1
PHGDH-220ENST00000641570 HMG20BQ9P0W2 317 aa15.68■□□□□ 0.1
PHGDH-220ENST00000641570 HDAC9Q9UKV0 1011 aa15.68■□□□□ 0.1
PHGDH-220ENST00000641570 JAG2Q9Y219 1238 aa15.68■□□□□ 0.1
PHGDH-220ENST00000641570 ARAP2Q8WZ64 1704 aa15.68■□□□□ 0.1
PHGDH-220ENST00000641570 RAD17O75943 681 aa15.67■□□□□ 0.1
PHGDH-220ENST00000641570 BMP2KLQ5H9B9 411 aa15.67■□□□□ 0.1
PHGDH-220ENST00000641570 STRIP1Q5VSL9 837 aa15.67■□□□□ 0.1
PHGDH-220ENST00000641570 DPY19L2Q6NUT2 758 aa15.67■□□□□ 0.1
PHGDH-220ENST00000641570 OGFOD1Q8N543 542 aa15.67■□□□□ 0.1
PHGDH-220ENST00000641570 PI4K2BQ8TCG2 481 aa15.67■□□□□ 0.1
PHGDH-220ENST00000641570 GJA3Q9Y6H8 435 aa15.67■□□□□ 0.1
PHGDH-220ENST00000641570 SALL3Q9BXA9 1300 aa15.67■□□□□ 0.1
PHGDH-220ENST00000641570 A0A1B0GUL6 1792 aa15.66■□□□□ 0.1
PHGDH-220ENST00000641570 SNED1Q8TER0 1413 aa15.66■□□□□ 0.1
PHGDH-220ENST00000641570 IGSF3O75054 1194 aa15.65■□□□□ 0.1
PHGDH-220ENST00000641570 ZFYP08048 801 aaPredicted RBP15.65■□□□□ 0.1
PHGDH-220ENST00000641570 LMOD1P29536 600 aaPredicted RBP15.65■□□□□ 0.1
PHGDH-220ENST00000641570 PI16Q6UXB8 463 aa15.65■□□□□ 0.1
PHGDH-220ENST00000641570 SKAP1Q86WV1 359 aa15.65■□□□□ 0.1
PHGDH-220ENST00000641570 RUFY2Q8WXA3 655 aa15.65■□□□□ 0.1
PHGDH-220ENST00000641570 SUGT1Q9Y2Z0 365 aa15.65■□□□□ 0.1
PHGDH-220ENST00000641570 LTBP1Q14766 1721 aa15.65■□□□□ 0.1
PHGDH-220ENST00000641570 ZC3H4Q9UPT8 1303 aaKnown RBP15.65■□□□□ 0.1
PHGDH-220ENST00000641570 IRS2Q9Y4H2 1338 aa15.65■□□□□ 0.1
PHGDH-220ENST00000641570 F8W031 263 aaPredicted RBP15.64■□□□□ 0.09
PHGDH-220ENST00000641570 LDHCP07864 332 aa15.64■□□□□ 0.09
PHGDH-220ENST00000641570 RBM5P52756 815 aaKnown RBP eCLIP15.64■□□□□ 0.09
PHGDH-220ENST00000641570 SCARF1Q14162 830 aa15.64■□□□□ 0.09
PHGDH-220ENST00000641570 TMED8Q6PL24 325 aaPredicted RBP15.64■□□□□ 0.09
PHGDH-220ENST00000641570 KBTBD3Q8NAB2 608 aa15.64■□□□□ 0.09
PHGDH-220ENST00000641570 NDUFB9Q9Y6M9 179 aa15.64■□□□□ 0.09
PHGDH-220ENST00000641570 FAM205AQ6ZU69 1335 aa15.64■□□□□ 0.09
PHGDH-220ENST00000641570 SALL1Q9NSC2 1324 aa15.64■□□□□ 0.09
PHGDH-220ENST00000641570 PSMD14O00487 310 aa15.63■□□□□ 0.09
PHGDH-220ENST00000641570 ZBTB22O15209 634 aa15.63■□□□□ 0.09
PHGDH-220ENST00000641570 CDC45O75419 566 aa15.63■□□□□ 0.09
PHGDH-220ENST00000641570 RPS12P25398 132 aaKnown RBP15.63■□□□□ 0.09
PHGDH-220ENST00000641570 MFAP1P55081 439 aaKnown RBP15.63■□□□□ 0.09
PHGDH-220ENST00000641570 FKBP1AP62942 108 aaKnown RBP15.63■□□□□ 0.09
PHGDH-220ENST00000641570 NAA16Q6N069 864 aaPredicted RBP15.63■□□□□ 0.09
PHGDH-220ENST00000641570 RSBN1LQ6PCB5 846 aaPredicted RBP15.63■□□□□ 0.09
PHGDH-220ENST00000641570 CYP2E1P05181 493 aaPredicted RBP15.62■□□□□ 0.09
PHGDH-220ENST00000641570 SDSP20132 328 aa15.62■□□□□ 0.09
PHGDH-220ENST00000641570 SLC9C2Q5TAH2 1124 aa15.62■□□□□ 0.09
PHGDH-220ENST00000641570 TBC1D9Q6ZT07 1266 aa15.62■□□□□ 0.09
PHGDH-220ENST00000641570 TICAM2Q86XR7 235 aa15.62■□□□□ 0.09
PHGDH-220ENST00000641570 AGBL3Q8NEM8 1001 aa15.62■□□□□ 0.09
PHGDH-220ENST00000641570 TTF2Q9UNY4 1162 aaKnown RBP15.62■□□□□ 0.09
PHGDH-220ENST00000641570 FER1L6Q2WGJ9 1857 aa15.62■□□□□ 0.09
PHGDH-220ENST00000641570 RFX7Q2KHR2 1363 aa15.62■□□□□ 0.09
PHGDH-220ENST00000641570 FZD9O00144 591 aa15.61■□□□□ 0.09
PHGDH-220ENST00000641570 BAG3O95817 575 aa15.61■□□□□ 0.09
PHGDH-220ENST00000641570 GSPT1P15170 499 aaKnown RBP15.61■□□□□ 0.09
PHGDH-220ENST00000641570 MMP14P50281 582 aa15.61■□□□□ 0.09
PHGDH-220ENST00000641570 CERS3Q8IU89 383 aa15.61■□□□□ 0.09
PHGDH-220ENST00000641570 KIAA0825Q8IV33 1275 aa15.61■□□□□ 0.09
PHGDH-220ENST00000641570 GPC2Q8N158 579 aa15.61■□□□□ 0.09
PHGDH-220ENST00000641570 MAGEB6Q8N7X4 407 aa15.61■□□□□ 0.09
PHGDH-220ENST00000641570 TEKT1Q969V4 418 aa15.61■□□□□ 0.09
PHGDH-220ENST00000641570 YDJCA8MPS7 323 aa15.6■□□□□ 0.09
PHGDH-220ENST00000641570 H7C1D1 291 aa15.6■□□□□ 0.09
PHGDH-220ENST00000641570 RNF113AO15541 343 aaKnown RBP15.6■□□□□ 0.09
PHGDH-220ENST00000641570 CYP7A1P22680 504 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms