RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 COL1A1P02452 1464 aaPredicted RBP24■■□□□ 1.43
PHGDH-210ENST00000641115 RIMBP2O15034 1052 aa23.99■■□□□ 1.43
PHGDH-210ENST00000641115 NLGN2Q8NFZ4 835 aa23.99■■□□□ 1.43
PHGDH-210ENST00000641115 RUFY2Q8WXA3 655 aa23.99■■□□□ 1.43
PHGDH-210ENST00000641115 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.99■■□□□ 1.431e-14■□□□□ 11
PHGDH-210ENST00000641115 WWC3Q9ULE0 1092 aa23.99■■□□□ 1.43
PHGDH-210ENST00000641115 ARFGEF1Q9Y6D6 1849 aa23.98■■□□□ 1.43
PHGDH-210ENST00000641115 TDRD7Q8NHU6 1098 aaKnown RBP23.98■■□□□ 1.43
PHGDH-210ENST00000641115 COA1Q9GZY4 146 aa23.98■■□□□ 1.43
PHGDH-210ENST00000641115 CD209Q9NNX6 404 aa23.98■■□□□ 1.43
PHGDH-210ENST00000641115 FHDC1Q9C0D6 1143 aaPredicted RBP23.97■■□□□ 1.43
PHGDH-210ENST00000641115 UPF2Q9HAU5 1272 aaKnown RBP23.97■■□□□ 1.43
PHGDH-210ENST00000641115 G3V3G9 751 aa23.96■■□□□ 1.43
PHGDH-210ENST00000641115 IL1R1P14778 569 aa23.96■■□□□ 1.43
PHGDH-210ENST00000641115 MFAP1P55081 439 aaKnown RBP23.96■■□□□ 1.43
PHGDH-210ENST00000641115 DCAF8Q5TAQ9 597 aa23.96■■□□□ 1.43
PHGDH-210ENST00000641115 CWC27Q6UX04 472 aaKnown RBP23.96■■□□□ 1.43
PHGDH-210ENST00000641115 PSMD1Q99460 953 aa23.96■■□□□ 1.43
PHGDH-210ENST00000641115 ESYT1Q9BSJ8 1104 aa23.96■■□□□ 1.43
PHGDH-210ENST00000641115 PIH1D3Q9NQM4 214 aaKnown RBP23.96■■□□□ 1.43
PHGDH-210ENST00000641115 BCS1LQ9Y276 419 aa23.96■■□□□ 1.43
PHGDH-210ENST00000641115 FER1L6Q2WGJ9 1857 aa23.96■■□□□ 1.43
PHGDH-210ENST00000641115 SEC24BO95487 1268 aa23.95■■□□□ 1.43
PHGDH-210ENST00000641115 ZFYP08048 801 aaPredicted RBP23.95■■□□□ 1.43
PHGDH-210ENST00000641115 CHAF1AQ13111 956 aaPredicted RBP23.95■■□□□ 1.43
PHGDH-210ENST00000641115 ZSCAN25Q6NSZ9 544 aa23.95■■□□□ 1.43
PHGDH-210ENST00000641115 IDH1O75874 414 aaKnown RBP23.95■■□□□ 1.42
PHGDH-210ENST00000641115 RAD50Q92878 1312 aa23.94■■□□□ 1.42
PHGDH-210ENST00000641115 CCDC88AQ3V6T2 1871 aa23.94■■□□□ 1.42
PHGDH-210ENST00000641115 REC8O95072 547 aa23.94■■□□□ 1.42
PHGDH-210ENST00000641115 MAP3K12Q12852 859 aa23.94■■□□□ 1.42
PHGDH-210ENST00000641115 NMIQ13287 307 aaPredicted RBP23.94■■□□□ 1.42
PHGDH-210ENST00000641115 LRP2BPQ9P2M1 347 aa23.94■■□□□ 1.42
PHGDH-210ENST00000641115 ABCF2Q9UG63 623 aa23.94■■□□□ 1.42
PHGDH-210ENST00000641115 RNF113AO15541 343 aaKnown RBP23.93■■□□□ 1.42
PHGDH-210ENST00000641115 WDR66Q8TBY9 1149 aa23.93■■□□□ 1.42
PHGDH-210ENST00000641115 MAST2Q6P0Q8 1798 aa23.93■■□□□ 1.42
PHGDH-210ENST00000641115 KIAA2012Q0VF49 1180 aa23.92■■□□□ 1.42
PHGDH-210ENST00000641115 ZGPATQ8N5A5 531 aaKnown RBP23.92■■□□□ 1.42
PHGDH-210ENST00000641115 FAM227BQ96M60 508 aa23.92■■□□□ 1.42
PHGDH-210ENST00000641115 CHD4Q14839 1912 aa23.92■■□□□ 1.42
PHGDH-210ENST00000641115 SGSM2O43147 1006 aa23.92■■□□□ 1.42
PHGDH-210ENST00000641115 PPIP5K2O43314 1243 aa23.92■■□□□ 1.42
PHGDH-210ENST00000641115 AOC3Q16853 763 aa23.92■■□□□ 1.42
PHGDH-210ENST00000641115 DOK7Q18PE1 504 aa23.92■■□□□ 1.42
PHGDH-210ENST00000641115 SLC9C2Q5TAH2 1124 aa23.92■■□□□ 1.42
PHGDH-210ENST00000641115 TSHZ2Q9NRE2 1034 aa23.92■■□□□ 1.42
PHGDH-210ENST00000641115 SALL1Q9NSC2 1324 aa23.91■■□□□ 1.42
PHGDH-210ENST00000641115 A0A0D9SFI3 127 aa23.91■■□□□ 1.42
PHGDH-210ENST00000641115 PODNQ7Z5L7 613 aa23.9■■□□□ 1.42
PHGDH-210ENST00000641115 VPS33BQ9H267 617 aa23.9■■□□□ 1.42
PHGDH-210ENST00000641115 HELLSQ9NRZ9 838 aa23.9■■□□□ 1.42
PHGDH-210ENST00000641115 JAG2Q9Y219 1238 aa23.9■■□□□ 1.42
PHGDH-210ENST00000641115 ADD2P35612 726 aa23.89■■□□□ 1.42
PHGDH-210ENST00000641115 ZMYM1Q5SVZ6 1142 aa23.89■■□□□ 1.42
PHGDH-210ENST00000641115 SPTY2D1Q68D10 685 aaPredicted RBP23.89■■□□□ 1.42
PHGDH-210ENST00000641115 SYT17Q9BSW7 474 aa23.89■■□□□ 1.42
PHGDH-210ENST00000641115 TAOK3Q9H2K8 898 aa23.89■■□□□ 1.42
PHGDH-210ENST00000641115 DBNDD1Q9H9R9 158 aa23.89■■□□□ 1.42
PHGDH-210ENST00000641115 RAI14Q9P0K7 980 aa23.89■■□□□ 1.42
PHGDH-210ENST00000641115 ECE2O60344 883 aa23.88■■□□□ 1.41
PHGDH-210ENST00000641115 CHGBP05060 677 aa23.88■■□□□ 1.41
PHGDH-210ENST00000641115 PDE6AP16499 860 aa23.88■■□□□ 1.41
PHGDH-210ENST00000641115 UBE3CQ15386 1083 aa23.88■■□□□ 1.41
PHGDH-210ENST00000641115 MCMDC2Q4G0Z9 681 aa23.88■■□□□ 1.41
PHGDH-210ENST00000641115 KIAA1211Q6ZU35 1233 aa23.88■■□□□ 1.41
PHGDH-210ENST00000641115 ERICH6Q7L0X2 663 aa23.88■■□□□ 1.41
PHGDH-210ENST00000641115 TBC1D22AQ8WUA7 517 aa23.88■■□□□ 1.41
PHGDH-210ENST00000641115 APPBP2Q92624 585 aa23.88■■□□□ 1.41
PHGDH-210ENST00000641115 IL25Q9H293 177 aa23.88■■□□□ 1.41
PHGDH-210ENST00000641115 ANO2Q9NQ90 1003 aa23.88■■□□□ 1.41
PHGDH-210ENST00000641115 IGSF3O75054 1194 aa23.88■■□□□ 1.41
PHGDH-210ENST00000641115 MAGEB6Q8N7X4 407 aa23.88■■□□□ 1.41
PHGDH-210ENST00000641115 FAM205AQ6ZU69 1335 aa23.87■■□□□ 1.41
PHGDH-210ENST00000641115 GTF2IP78347 998 aa23.87■■□□□ 1.41
PHGDH-210ENST00000641115 ZNF277Q9NRM2 450 aaPredicted RBP23.87■■□□□ 1.41
PHGDH-210ENST00000641115 ZNF532Q9HCE3 1301 aa23.87■■□□□ 1.41
PHGDH-210ENST00000641115 SLFNL1Q499Z3 407 aa23.86■■□□□ 1.41
PHGDH-210ENST00000641115 LARGE2Q8N3Y3 721 aa23.86■■□□□ 1.41
PHGDH-210ENST00000641115 FBXW7Q969H0 707 aa23.86■■□□□ 1.41
PHGDH-210ENST00000641115 LDHBP07195 334 aaKnown RBP23.85■■□□□ 1.41
PHGDH-210ENST00000641115 MFSD14BQ5SR56 506 aa23.85■■□□□ 1.41
PHGDH-210ENST00000641115 TMED8Q6PL24 325 aaPredicted RBP23.85■■□□□ 1.41
PHGDH-210ENST00000641115 SEC62Q99442 399 aaKnown RBP23.85■■□□□ 1.41
PHGDH-210ENST00000641115 MAST3O60307 1309 aa23.85■■□□□ 1.41
PHGDH-210ENST00000641115 PSME4Q14997 1843 aa23.85■■□□□ 1.41
PHGDH-210ENST00000641115 SCN9AQ15858 1988 aa23.85■■□□□ 1.41
PHGDH-210ENST00000641115 PRDX5P30044 214 aa23.84■■□□□ 1.41
PHGDH-210ENST00000641115 IARSP41252 1262 aaKnown RBP23.84■■□□□ 1.41
PHGDH-210ENST00000641115 TTLL5Q6EMB2 1281 aa23.84■■□□□ 1.41
PHGDH-210ENST00000641115 DZIP1Q86YF9 867 aaKnown RBP23.84■■□□□ 1.41
PHGDH-210ENST00000641115 CCDC171Q6TFL3 1326 aa23.84■■□□□ 1.41
PHGDH-210ENST00000641115 LTBP3Q9NS15 1303 aa23.84■■□□□ 1.41
PHGDH-210ENST00000641115 TCRBV5S4A2TA0A5A2 114 aa23.84■■□□□ 1.41
PHGDH-210ENST00000641115 NAA16Q6N069 864 aaPredicted RBP23.84■■□□□ 1.41
PHGDH-210ENST00000641115 OSBP2Q969R2 916 aa23.84■■□□□ 1.41
PHGDH-210ENST00000641115 C22orf23Q9BZE7 217 aa23.84■■□□□ 1.41
PHGDH-210ENST00000641115 ZNF646O15015 1829 aaPredicted RBP23.83■■□□□ 1.41
PHGDH-210ENST00000641115 SRCAPQ6ZRS2 3230 aa23.83■■□□□ 1.41
PHGDH-210ENST00000641115 NFKBIEO00221 500 aa23.83■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms