RNA–Protein interactions for RNA: ENST00000638567.1

SCARB2-210, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 4,415 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-210ENST00000638567 ANO1Q5XXA6 986 aa19.03■□□□□ 0.64
SCARB2-210ENST00000638567 MIGA1Q8NAN2 632 aa19.03■□□□□ 0.64
SCARB2-210ENST00000638567 SMARCC1Q92922 1105 aaPredicted RBP19.03■□□□□ 0.64
SCARB2-210ENST00000638567 LSG1Q9H089 658 aaKnown RBP19.03■□□□□ 0.64
SCARB2-210ENST00000638567 BMP15O95972 392 aa19.03■□□□□ 0.64
SCARB2-210ENST00000638567 ADAMTS2O95450 1211 aa19.02■□□□□ 0.64
SCARB2-210ENST00000638567 TRIM21P19474 475 aaKnown RBP19.02■□□□□ 0.64
SCARB2-210ENST00000638567 CTAGE1Q96RT6 745 aa19.02■□□□□ 0.64
SCARB2-210ENST00000638567 RAB34Q9BZG1 259 aa19.02■□□□□ 0.64
SCARB2-210ENST00000638567 LZTFL1Q9NQ48 299 aa19.02■□□□□ 0.64
SCARB2-210ENST00000638567 JADE2Q9NQC1 790 aa19.02■□□□□ 0.64
SCARB2-210ENST00000638567 B4E1Z4 1266 aa19.02■□□□□ 0.64
SCARB2-210ENST00000638567 TSG101Q99816 390 aa19.02■□□□□ 0.64
SCARB2-210ENST00000638567 PYM1Q9BRP8 204 aaKnown RBP19.02■□□□□ 0.64
SCARB2-210ENST00000638567 LRMPQ12912 555 aa19.02■□□□□ 0.63
SCARB2-210ENST00000638567 GTF3C6Q969F1 213 aa19.02■□□□□ 0.63
SCARB2-210ENST00000638567 ZKSCAN3Q9BRR0 538 aa19.02■□□□□ 0.63
SCARB2-210ENST00000638567 METP08581 1390 aa19.02■□□□□ 0.63
SCARB2-210ENST00000638567 ZPR1O75312 459 aa19.01■□□□□ 0.63
SCARB2-210ENST00000638567 NR1I2O75469 434 aa19.01■□□□□ 0.63
SCARB2-210ENST00000638567 LTKP29376 864 aa19.01■□□□□ 0.63
SCARB2-210ENST00000638567 SPAG1Q07617 926 aa19.01■□□□□ 0.63
SCARB2-210ENST00000638567 CCDC152Q4G0S7 254 aa19.01■□□□□ 0.63
SCARB2-210ENST00000638567 MAGEB6Q8N7X4 407 aa19.01■□□□□ 0.63
SCARB2-210ENST00000638567 KRI1Q8N9T8 703 aaKnown RBP19.01■□□□□ 0.63
SCARB2-210ENST00000638567 SEC62Q99442 399 aaKnown RBP19.01■□□□□ 0.63
SCARB2-210ENST00000638567 YEATS2Q9ULM3 1422 aa19.01■□□□□ 0.63
SCARB2-210ENST00000638567 ELP1O95163 1332 aa19.01■□□□□ 0.63
SCARB2-210ENST00000638567 MPHOSPH10O00566 681 aaKnown RBP19.01■□□□□ 0.63
SCARB2-210ENST00000638567 ATP5JP18859 108 aa19.01■□□□□ 0.63
SCARB2-210ENST00000638567 ZNF76P36508 570 aa19.01■□□□□ 0.63
SCARB2-210ENST00000638567 MATR3P43243 847 aaKnown RBP eCLIP19.01■□□□□ 0.63
SCARB2-210ENST00000638567 TMEM266Q2M3C6 531 aa19.01■□□□□ 0.63
SCARB2-210ENST00000638567 NAA16Q6N069 864 aaPredicted RBP19.01■□□□□ 0.63
SCARB2-210ENST00000638567 GTPBP4Q9BZE4 634 aaKnown RBP19.01■□□□□ 0.63
SCARB2-210ENST00000638567 OGFRQ9NZT2 677 aa19.01■□□□□ 0.63
SCARB2-210ENST00000638567 NSFL1CQ9UNZ2 370 aaKnown RBP19.01■□□□□ 0.63
SCARB2-210ENST00000638567 IRS4O14654 1257 aaPredicted RBP19.01■□□□□ 0.63
SCARB2-210ENST00000638567 ERO1AQ96HE7 468 aa19.01■□□□□ 0.63
SCARB2-210ENST00000638567 CTAGE15A4D2H0 777 aa19■□□□□ 0.63
SCARB2-210ENST00000638567 FGFR1OPO95684 399 aaKnown RBP19■□□□□ 0.63
SCARB2-210ENST00000638567 CTAGE8P0CG41 777 aa19■□□□□ 0.63
SCARB2-210ENST00000638567 CTAGE6Q86UF2 777 aa19■□□□□ 0.63
SCARB2-210ENST00000638567 CTAGE4Q8IX94 777 aa19■□□□□ 0.63
SCARB2-210ENST00000638567 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19■□□□□ 0.63
SCARB2-210ENST00000638567 CLASP1Q7Z460 1538 aa19■□□□□ 0.63
SCARB2-210ENST00000638567 SIRT1Q96EB6 747 aa19■□□□□ 0.63
SCARB2-210ENST00000638567 A1BGP04217 495 aa19■□□□□ 0.63
SCARB2-210ENST00000638567 STAT6P42226 847 aa19■□□□□ 0.63
SCARB2-210ENST00000638567 UBA5Q9GZZ9 404 aa19■□□□□ 0.63
SCARB2-210ENST00000638567 BCL2L12Q9HB09 334 aa19■□□□□ 0.63
SCARB2-210ENST00000638567 CDC42BPAQ5VT25 1732 aa18.99■□□□□ 0.63
SCARB2-210ENST00000638567 NEURL1BA8MQ27 555 aa18.99■□□□□ 0.63
SCARB2-210ENST00000638567 GPAA1O43292 621 aa18.99■□□□□ 0.63
SCARB2-210ENST00000638567 AKR1B10O60218 316 aa18.99■□□□□ 0.63
SCARB2-210ENST00000638567 APPBP2Q92624 585 aa18.99■□□□□ 0.63
SCARB2-210ENST00000638567 CALML4Q96GE6 196 aa18.99■□□□□ 0.63
SCARB2-210ENST00000638567 SLC52A2Q9HAB3 445 aa18.99■□□□□ 0.63
SCARB2-210ENST00000638567 ZNF202O95125 648 aa18.99■□□□□ 0.63
SCARB2-210ENST00000638567 RMND1Q9NWS8 449 aa18.99■□□□□ 0.63
SCARB2-210ENST00000638567 TMEM2Q9UHN6 1383 aa18.99■□□□□ 0.63
SCARB2-210ENST00000638567 XAGE2Q96GT9 111 aa18.99■□□□□ 0.63
SCARB2-210ENST00000638567 ANGEL1Q9UNK9 670 aaKnown RBP18.99■□□□□ 0.63
SCARB2-210ENST00000638567 FANCCQ00597 558 aa18.99■□□□□ 0.63
SCARB2-210ENST00000638567 TAX1BP1Q86VP1 789 aa18.99■□□□□ 0.63
SCARB2-210ENST00000638567 ZFP91Q96JP5 570 aaPredicted RBP18.99■□□□□ 0.63
SCARB2-210ENST00000638567 TIGD1Q96MW7 591 aa18.99■□□□□ 0.63
SCARB2-210ENST00000638567 CRNKL1Q9BZJ0 848 aaKnown RBP18.99■□□□□ 0.63
SCARB2-210ENST00000638567 SHTN1A0MZ66 631 aa18.98■□□□□ 0.63
SCARB2-210ENST00000638567 AMPD3Q01432 767 aa18.98■□□□□ 0.63
SCARB2-210ENST00000638567 SMAP1Q8IYB5 467 aaPredicted RBP18.98■□□□□ 0.63
SCARB2-210ENST00000638567 PTCH1Q13635 1447 aa18.98■□□□□ 0.63
SCARB2-210ENST00000638567 MBD4O95243 580 aa18.98■□□□□ 0.63
SCARB2-210ENST00000638567 CTR9Q6PD62 1173 aa18.98■□□□□ 0.63
SCARB2-210ENST00000638567 USP28Q96RU2 1077 aa18.98■□□□□ 0.63
SCARB2-210ENST00000638567 BAG1Q99933 345 aaPredicted RBP18.98■□□□□ 0.63
SCARB2-210ENST00000638567 C19orf44Q9H6X5 657 aa18.98■□□□□ 0.63
SCARB2-210ENST00000638567 CCDC96Q2M329 555 aa18.98■□□□□ 0.63
SCARB2-210ENST00000638567 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.98■□□□□ 0.63
SCARB2-210ENST00000638567 PUF60Q9UHX1 559 aaKnown RBP18.98■□□□□ 0.63
SCARB2-210ENST00000638567 IL2RBP14784 551 aa18.97■□□□□ 0.63
SCARB2-210ENST00000638567 GOLGA1Q92805 767 aa18.97■□□□□ 0.63
SCARB2-210ENST00000638567 KCNH3Q9ULD8 1083 aa18.97■□□□□ 0.63
SCARB2-210ENST00000638567 E7EWF7 191 aa18.97■□□□□ 0.63
SCARB2-210ENST00000638567 CCDC40Q4G0X9 1142 aa18.97■□□□□ 0.63
SCARB2-210ENST00000638567 ELF2Q15723 593 aa18.97■□□□□ 0.63
SCARB2-210ENST00000638567 CCDC178Q5BJE1 867 aa18.97■□□□□ 0.63
SCARB2-210ENST00000638567 SPECC1Q5M775 1068 aa18.97■□□□□ 0.63
SCARB2-210ENST00000638567 CCDC191Q8NCU4 936 aa18.97■□□□□ 0.63
SCARB2-210ENST00000638567 CABP5Q9NP86 173 aa18.97■□□□□ 0.63
SCARB2-210ENST00000638567 ALS2CR12Q96Q35 445 aa18.97■□□□□ 0.63
SCARB2-210ENST00000638567 CTAGE9A4FU28 777 aa18.96■□□□□ 0.63
SCARB2-210ENST00000638567 PROSER3Q2NL68 480 aa18.96■□□□□ 0.63
SCARB2-210ENST00000638567 DZIP3Q86Y13 1208 aaKnown RBP18.96■□□□□ 0.63
SCARB2-210ENST00000638567 ANKRD18AQ8IVF6 992 aa18.96■□□□□ 0.63
SCARB2-210ENST00000638567 MAP4K1Q92918 833 aa18.96■□□□□ 0.63
SCARB2-210ENST00000638567 PHKBQ93100 1093 aa18.96■□□□□ 0.63
SCARB2-210ENST00000638567 MYL10Q9BUA6 226 aa18.96■□□□□ 0.63
SCARB2-210ENST00000638567 IQGAP3Q86VI3 1631 aa18.96■□□□□ 0.63
SCARB2-210ENST00000638567 PSMA7O14818 248 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms