RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 CNPY2Q9Y2B0 182 aa19.2■□□□□ 0.66
CACNA1A-253ENST00000637927 ACEP12821 1306 aa19.2■□□□□ 0.66
CACNA1A-253ENST00000637927 ARID4AP29374 1257 aaPredicted RBP19.2■□□□□ 0.66
CACNA1A-253ENST00000637927 IL1RL1Q01638 556 aa19.2■□□□□ 0.66
CACNA1A-253ENST00000637927 DHX58Q96C10 678 aa19.2■□□□□ 0.66
CACNA1A-253ENST00000637927 CD109Q6YHK3 1445 aa19.2■□□□□ 0.66
CACNA1A-253ENST00000637927 CCDC169A6NNP5 214 aa19.2■□□□□ 0.66
CACNA1A-253ENST00000637927 SARNPP82979 210 aaKnown RBP19.2■□□□□ 0.66
CACNA1A-253ENST00000637927 FAM47CQ5HY64 1035 aa19.2■□□□□ 0.66
CACNA1A-253ENST00000637927 SKA2Q8WVK7 121 aaPredicted RBP19.2■□□□□ 0.66
CACNA1A-253ENST00000637927 ASIC1P78348 528 aa19.2■□□□□ 0.66
CACNA1A-253ENST00000637927 IGSF3O75054 1194 aa19.2■□□□□ 0.66
CACNA1A-253ENST00000637927 TNNI2P48788 182 aa19.2■□□□□ 0.66
CACNA1A-253ENST00000637927 SNW1Q13573 536 aaKnown RBP19.2■□□□□ 0.66
CACNA1A-253ENST00000637927 JAKMIP2Q96AA8 810 aa19.2■□□□□ 0.66
CACNA1A-253ENST00000637927 ALG1Q9BT22 464 aa19.2■□□□□ 0.66
CACNA1A-253ENST00000637927 FNDC3AQ9Y2H6 1198 aaKnown RBP19.2■□□□□ 0.66
CACNA1A-253ENST00000637927 VIMP08670 466 aaKnown RBP19.19■□□□□ 0.66
CACNA1A-253ENST00000637927 Q6ZUG5 572 aa19.19■□□□□ 0.66
CACNA1A-253ENST00000637927 DYNC1I1O14576 645 aa19.19■□□□□ 0.66
CACNA1A-253ENST00000637927 GAS8O95995 478 aa19.19■□□□□ 0.66
CACNA1A-253ENST00000637927 ECHDC1Q9NTX5 307 aa19.19■□□□□ 0.66
CACNA1A-253ENST00000637927 RFC1P35251 1148 aaPredicted RBP19.19■□□□□ 0.66
CACNA1A-253ENST00000637927 LCA5Q86VQ0 697 aa19.19■□□□□ 0.66
CACNA1A-253ENST00000637927 TAB3Q8N5C8 712 aaPredicted RBP19.19■□□□□ 0.66
CACNA1A-253ENST00000637927 MAGEB6Q8N7X4 407 aa19.19■□□□□ 0.66
CACNA1A-253ENST00000637927 GPCPD1Q9NPB8 672 aa19.19■□□□□ 0.66
CACNA1A-253ENST00000637927 TACC3Q9Y6A5 838 aa19.19■□□□□ 0.66
CACNA1A-253ENST00000637927 ANKRD13DQ6ZTN6 518 aa19.19■□□□□ 0.66
CACNA1A-253ENST00000637927 GPHNQ9NQX3 736 aaPredicted RBP19.19■□□□□ 0.66
CACNA1A-253ENST00000637927 COPS6Q7L5N1 327 aa19.18■□□□□ 0.66
CACNA1A-253ENST00000637927 KRT19P08727 400 aa19.18■□□□□ 0.66
CACNA1A-253ENST00000637927 BIRC3Q13489 604 aa19.18■□□□□ 0.66
CACNA1A-253ENST00000637927 CASC4Q6P4E1 433 aa19.18■□□□□ 0.66
CACNA1A-253ENST00000637927 VPS52Q8N1B4 723 aa19.18■□□□□ 0.66
CACNA1A-253ENST00000637927 TBC1D2Q9BYX2 928 aa19.18■□□□□ 0.66
CACNA1A-253ENST00000637927 TRIM7Q9C029 511 aa19.18■□□□□ 0.66
CACNA1A-253ENST00000637927 ZRANB1Q9UGI0 708 aa19.18■□□□□ 0.66
CACNA1A-253ENST00000637927 IGHDP01880 384 aa19.18■□□□□ 0.66
CACNA1A-253ENST00000637927 XRCC6P12956 609 aaKnown RBP eCLIP19.18■□□□□ 0.66
CACNA1A-253ENST00000637927 ALDH1L2Q3SY69 923 aa19.18■□□□□ 0.66
CACNA1A-253ENST00000637927 CEP120Q8N960 986 aa19.18■□□□□ 0.66
CACNA1A-253ENST00000637927 ZCRB1Q8TBF4 217 aaKnown RBP19.18■□□□□ 0.66
CACNA1A-253ENST00000637927 SLC4A1P02730 911 aa19.18■□□□□ 0.66
CACNA1A-253ENST00000637927 MICALL1Q8N3F8 863 aa19.18■□□□□ 0.66
CACNA1A-253ENST00000637927 BRF1Q92994 677 aa19.18■□□□□ 0.66
CACNA1A-253ENST00000637927 LDHCP07864 332 aa19.17■□□□□ 0.66
CACNA1A-253ENST00000637927 RHOXF2BP0C7M4 288 aa19.17■□□□□ 0.66
CACNA1A-253ENST00000637927 GSTO1P78417 241 aa19.17■□□□□ 0.66
CACNA1A-253ENST00000637927 RHOXF2Q9BQY4 288 aa19.17■□□□□ 0.66
CACNA1A-253ENST00000637927 MKRN1Q9UHC7 482 aaKnown RBP19.17■□□□□ 0.66
CACNA1A-253ENST00000637927 SNRPA1P09661 255 aaKnown RBP19.17■□□□□ 0.66
CACNA1A-253ENST00000637927 NAA16Q6N069 864 aaPredicted RBP19.17■□□□□ 0.66
CACNA1A-253ENST00000637927 RNF217Q8TC41 542 aa19.17■□□□□ 0.66
CACNA1A-253ENST00000637927 MAGEB6P1A0A0J9YX57 407 aa19.17■□□□□ 0.66
CACNA1A-253ENST00000637927 DTNBO60941 627 aa19.17■□□□□ 0.66
CACNA1A-253ENST00000637927 PDIA4P13667 645 aaKnown RBP19.17■□□□□ 0.66
CACNA1A-253ENST00000637927 TMTC4Q5T4D3 741 aa19.17■□□□□ 0.66
CACNA1A-253ENST00000637927 FCHSD1Q86WN1 690 aa19.17■□□□□ 0.66
CACNA1A-253ENST00000637927 GSDMBQ8TAX9 411 aa19.17■□□□□ 0.66
CACNA1A-253ENST00000637927 CEP85LQ5SZL2 805 aa19.17■□□□□ 0.66
CACNA1A-253ENST00000637927 PAGR1Q9BTK6 254 aa19.17■□□□□ 0.66
CACNA1A-253ENST00000637927 NOS1P29475 1434 aa19.16■□□□□ 0.66
CACNA1A-253ENST00000637927 ITKQ08881 620 aa19.16■□□□□ 0.66
CACNA1A-253ENST00000637927 RAD51AP2Q09MP3 1159 aa19.16■□□□□ 0.66
CACNA1A-253ENST00000637927 RMDN2Q96LZ7 410 aa19.16■□□□□ 0.66
CACNA1A-253ENST00000637927 TBC1D7Q9P0N9 293 aa19.16■□□□□ 0.66
CACNA1A-253ENST00000637927 TROQ12816 1431 aaPredicted RBP19.16■□□□□ 0.66
CACNA1A-253ENST00000637927 HSPA4P34932 840 aa19.16■□□□□ 0.66
CACNA1A-253ENST00000637927 RTN1Q16799 776 aa19.16■□□□□ 0.66
CACNA1A-253ENST00000637927 SAT1P21673 171 aa19.16■□□□□ 0.66
CACNA1A-253ENST00000637927 SYKP43405 635 aa19.16■□□□□ 0.66
CACNA1A-253ENST00000637927 CC2D2AQ9P2K1 1620 aa19.16■□□□□ 0.66
CACNA1A-253ENST00000637927 LPXNO60711 386 aa19.15■□□□□ 0.66
CACNA1A-253ENST00000637927 PPP2R5AQ15172 486 aa19.15■□□□□ 0.66
CACNA1A-253ENST00000637927 PARD3BQ8TEW8 1205 aa19.15■□□□□ 0.66
CACNA1A-253ENST00000637927 PTPDC1A2A3K4 754 aa19.15■□□□□ 0.66
CACNA1A-253ENST00000637927 TXNDC9O14530 226 aa19.15■□□□□ 0.66
CACNA1A-253ENST00000637927 MCM5P33992 734 aa19.15■□□□□ 0.66
CACNA1A-253ENST00000637927 ATP6V0A2Q9Y487 856 aa19.15■□□□□ 0.66
CACNA1A-253ENST00000637927 ZBTB43O43298 467 aa19.15■□□□□ 0.66
CACNA1A-253ENST00000637927 SESTD1Q86VW0 696 aa19.15■□□□□ 0.66
CACNA1A-253ENST00000637927 MEIS3Q99687 375 aa19.15■□□□□ 0.66
CACNA1A-253ENST00000637927 ABCC5O15440 1437 aa19.15■□□□□ 0.66
CACNA1A-253ENST00000637927 SYNJ2BP-COX16A0A087WUM0 186 aa19.14■□□□□ 0.66
CACNA1A-253ENST00000637927 IDI1Q13907 227 aa19.14■□□□□ 0.66
CACNA1A-253ENST00000637927 COX16Q9P0S2 106 aa19.14■□□□□ 0.66
CACNA1A-253ENST00000637927 UBASH3AP57075 661 aa19.14■□□□□ 0.65
CACNA1A-253ENST00000637927 PTPROQ16827 1216 aa19.14■□□□□ 0.65
CACNA1A-253ENST00000637927 USH1GQ495M9 461 aa19.14■□□□□ 0.65
CACNA1A-253ENST00000637927 FAM114A1Q8IWE2 563 aa19.14■□□□□ 0.65
CACNA1A-253ENST00000637927 GBP7Q8N8V2 638 aaPredicted RBP19.14■□□□□ 0.65
CACNA1A-253ENST00000637927 PTPRCP08575 1304 aa19.14■□□□□ 0.65
CACNA1A-253ENST00000637927 SPDYE2BA6NHP3 402 aa19.14■□□□□ 0.65
CACNA1A-253ENST00000637927 SPDYE6P0CI01 402 aa19.14■□□□□ 0.65
CACNA1A-253ENST00000637927 ANO6Q4KMQ2 910 aa19.14■□□□□ 0.65
CACNA1A-253ENST00000637927 SLC9C2Q5TAH2 1124 aa19.14■□□□□ 0.65
CACNA1A-253ENST00000637927 BAG1Q99933 345 aaPredicted RBP19.14■□□□□ 0.65
CACNA1A-253ENST00000637927 SPDYE3A6NKU9 549 aa19.14■□□□□ 0.65
CACNA1A-253ENST00000637927 CAMSAP2Q08AD1 1489 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms