RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 NBPF26B4DH59 902 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 E7EWF7 191 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 NBPF14Q5TI25 921 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 NBPF10Q6P3W6 841 aaKnown RBP5.29□□□□□ -1.56
SCN1A-210ENST00000635776 BARGINQ6ZT62 677 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 NBPF15Q8N660 670 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 RNF214Q8ND24 703 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 PIGBQ92521 554 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 ZMYM6O95789 1325 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 LMO7Q8WWI1 1683 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 A0A1W2PQ27 194 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 A0A1W2PQ64 194 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 A0A1W2PQD8 194 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 IFIT3O14879 490 aaKnown RBP5.29□□□□□ -1.56
SCN1A-210ENST00000635776 CLSTN2Q9H4D0 955 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 PRAMEF22A3QJZ6 481 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 CNPY2Q9Y2B0 182 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 PLCG2P16885 1265 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 PRIM1P49642 420 aaKnown RBP5.29□□□□□ -1.56
SCN1A-210ENST00000635776 DNM1Q05193 864 aaKnown RBP5.29□□□□□ -1.56
SCN1A-210ENST00000635776 FAM160A1Q05DH4 1040 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 FOXD4L6Q3SYB3 417 aaPredicted RBP5.29□□□□□ -1.56
SCN1A-210ENST00000635776 RILPL1Q5EBL4 403 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 FOXD4L3Q6VB84 417 aaPredicted RBP5.29□□□□□ -1.56
SCN1A-210ENST00000635776 TMC4Q7Z404 712 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 CATIPQ7Z7H3 387 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 CCDC12Q8WUD4 166 aaPredicted RBP5.29□□□□□ -1.56
SCN1A-210ENST00000635776 PRIMPOLQ96LW4 560 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 CYP21A2P08686 494 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 TMEM67Q5HYA8 995 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 MEX3CQ5U5Q3 659 aaKnown RBP5.29□□□□□ -1.56
SCN1A-210ENST00000635776 SETDB2Q96T68 719 aa5.29□□□□□ -1.56
SCN1A-210ENST00000635776 GPAA1O43292 621 aa5.28□□□□□ -1.56
SCN1A-210ENST00000635776 CYP19A1P11511 503 aaPredicted RBP5.28□□□□□ -1.56
SCN1A-210ENST00000635776 TTLL11Q8NHH1 800 aa5.28□□□□□ -1.56
SCN1A-210ENST00000635776 KLHDC4Q8TBB5 520 aa5.28□□□□□ -1.56
SCN1A-210ENST00000635776 SMC2O95347 1197 aa5.28□□□□□ -1.56
SCN1A-210ENST00000635776 WTAPQ15007 396 aa5.28□□□□□ -1.56
SCN1A-210ENST00000635776 NGLY1Q96IV0 654 aa5.28□□□□□ -1.56
SCN1A-210ENST00000635776 TPCN1Q9ULQ1 816 aa5.28□□□□□ -1.56
SCN1A-210ENST00000635776 CASP7P55210 303 aa5.28□□□□□ -1.56
SCN1A-210ENST00000635776 GIMAP6Q6P9H5 292 aa5.28□□□□□ -1.56
SCN1A-210ENST00000635776 FERMT3Q86UX7 667 aa5.28□□□□□ -1.56
SCN1A-210ENST00000635776 KAZALD1Q96I82 304 aa5.28□□□□□ -1.56
SCN1A-210ENST00000635776 MAST3O60307 1309 aa5.28□□□□□ -1.56
SCN1A-210ENST00000635776 PATL2C9JE40 543 aaKnown RBP5.28□□□□□ -1.56
SCN1A-210ENST00000635776 LIFRP42702 1097 aa5.28□□□□□ -1.56
SCN1A-210ENST00000635776 SPATA5Q8NB90 893 aa5.28□□□□□ -1.56
SCN1A-210ENST00000635776 EPHA10Q5JZY3 1008 aa5.28□□□□□ -1.56
SCN1A-210ENST00000635776 NECAB1Q8N987 351 aa5.28□□□□□ -1.56
SCN1A-210ENST00000635776 LOC102724428A0A0B4J2F2 783 aa5.28□□□□□ -1.56
SCN1A-210ENST00000635776 SIK1P57059 783 aa5.28□□□□□ -1.56
SCN1A-210ENST00000635776 ZNF165P49910 485 aa5.28□□□□□ -1.56
SCN1A-210ENST00000635776 SMARCC2Q8TAQ2 1214 aa5.28□□□□□ -1.56
SCN1A-210ENST00000635776 RTCBQ9Y3I0 505 aaKnown RBP5.28□□□□□ -1.56
SCN1A-210ENST00000635776 KDM4AO75164 1064 aa5.28□□□□□ -1.56
SCN1A-210ENST00000635776 CCDC102BQ68D86 513 aa5.28□□□□□ -1.56
SCN1A-210ENST00000635776 LEO1Q8WVC0 666 aaPredicted RBP5.28□□□□□ -1.56
SCN1A-210ENST00000635776 DDX11Q96FC9 970 aa5.28□□□□□ -1.56
SCN1A-210ENST00000635776 G3V3G9 751 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 DEXIO95424 95 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 ADD2P35612 726 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 DCAF8Q5TAQ9 597 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 ATG9AQ7Z3C6 839 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 CCDC148Q8NFR7 591 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 DDX17Q92841 729 aaKnown RBP5.27□□□□□ -1.57
SCN1A-210ENST00000635776 DACT1Q9NYF0 836 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 CT47A1Q5JQC4 288 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-210ENST00000635776 SPTLC2O15270 562 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 TRAF1Q13077 416 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 RC3H1Q5TC82 1133 aaKnown RBP5.27□□□□□ -1.57
SCN1A-210ENST00000635776 ADALQ6DHV7 355 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 CCAR1Q8IX12 1150 aaKnown RBP5.27□□□□□ -1.57
SCN1A-210ENST00000635776 TLR7Q9NYK1 1049 aaKnown RBP5.27□□□□□ -1.57
SCN1A-210ENST00000635776 TMEM63CQ9P1W3 806 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 CALML3P27482 149 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 ARID4AP29374 1257 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-210ENST00000635776 HOXA7P31268 230 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-210ENST00000635776 ZAP70P43403 619 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 FILIP1LQ4L180 1135 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 NBPF5PQ86XG9 351 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-210ENST00000635776 ZNF34Q8IZ26 560 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 PDLIM2Q96JY6 352 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 RCOR1Q9UKL0 485 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 SLC4A4Q9Y6R1 1079 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 ZNF609O15014 1411 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 MAGEB6P1A0A0J9YX57 407 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 ZNF500O60304 480 aaPredicted RBP5.27□□□□□ -1.57
SCN1A-210ENST00000635776 ADAMTS2O95450 1211 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 EIF5P55010 431 aaKnown RBP5.27□□□□□ -1.57
SCN1A-210ENST00000635776 ADCK5Q3MIX3 580 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 FSIP1Q8NA03 581 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 TIGD1Q96MW7 591 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 ALG1Q9BT22 464 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 STK36Q9NRP7 1315 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 TNS2Q63HR2 1409 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 GOLGA6L9A6NEM1 432 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 ADRA2BP18089 450 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 EVCP57679 992 aa5.27□□□□□ -1.57
SCN1A-210ENST00000635776 RTN1Q16799 776 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms