RNA–Protein interactions for RNA: ENST00000630424.2

UBE3A-220, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 5 BASIC

Gene UBE3A, Length 5,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-220ENST00000630424 VAMP4O75379 141 aa16.07■□□□□ 0.16
UBE3A-220ENST00000630424 PARP1P09874 1014 aaKnown RBP16.07■□□□□ 0.16
UBE3A-220ENST00000630424 GIMAP6Q6P9H5 292 aa16.07■□□□□ 0.16
UBE3A-220ENST00000630424 TSNARE1Q96NA8 513 aa16.07■□□□□ 0.16
UBE3A-220ENST00000630424 TRAPPC8Q9Y2L5 1435 aa16.07■□□□□ 0.16
UBE3A-220ENST00000630424 TTC41PQ6P2S7 1318 aa16.06■□□□□ 0.16
UBE3A-220ENST00000630424 CALRP27797 417 aaKnown RBP16.06■□□□□ 0.16
UBE3A-220ENST00000630424 MCM7P33993 719 aa16.06■□□□□ 0.16
UBE3A-220ENST00000630424 IFI16Q16666 785 aaKnown RBP16.06■□□□□ 0.16
UBE3A-220ENST00000630424 NEMFO60524 1076 aa16.06■□□□□ 0.16
UBE3A-220ENST00000630424 APOBRQ0VD83 1088 aa16.06■□□□□ 0.16
UBE3A-220ENST00000630424 GPR162Q16538 588 aa16.06■□□□□ 0.16
UBE3A-220ENST00000630424 DDX17Q92841 729 aaKnown RBP16.06■□□□□ 0.16
UBE3A-220ENST00000630424 UBASH3AP57075 661 aa16.06■□□□□ 0.16
UBE3A-220ENST00000630424 LRRC45Q96CN5 670 aa16.06■□□□□ 0.16
UBE3A-220ENST00000630424 ZSWIM4Q9H7M6 989 aa16.06■□□□□ 0.16
UBE3A-220ENST00000630424 THOC2Q8NI27 1593 aaKnown RBP16.05■□□□□ 0.16
UBE3A-220ENST00000630424 EYA2O00167 538 aa16.05■□□□□ 0.16
UBE3A-220ENST00000630424 HARSP12081 509 aaKnown RBP16.05■□□□□ 0.16
UBE3A-220ENST00000630424 CAVIN2O95810 425 aa16.05■□□□□ 0.16
UBE3A-220ENST00000630424 DNAJC10Q8IXB1 793 aa16.05■□□□□ 0.16
UBE3A-220ENST00000630424 PDCL2Q8N4E4 241 aa16.05■□□□□ 0.16
UBE3A-220ENST00000630424 PLBD2Q8NHP8 589 aa16.05■□□□□ 0.16
UBE3A-220ENST00000630424 CCDC87Q9NVE4 849 aa16.05■□□□□ 0.16
UBE3A-220ENST00000630424 A0A1B0GUL7 405 aa16.05■□□□□ 0.16
UBE3A-220ENST00000630424 PLIN2Q99541 437 aa16.05■□□□□ 0.16
UBE3A-220ENST00000630424 KRT2P35908 639 aa16.05■□□□□ 0.16
UBE3A-220ENST00000630424 GNG11P61952 73 aa16.05■□□□□ 0.16
UBE3A-220ENST00000630424 ARHGEF10LQ9HCE6 1279 aa16.05■□□□□ 0.16
UBE3A-220ENST00000630424 PTGS1P23219 599 aa16.04■□□□□ 0.16
UBE3A-220ENST00000630424 TRPM2O94759 1503 aa16.04■□□□□ 0.16
UBE3A-220ENST00000630424 UHRF1BP1Q6BDS2 1440 aa16.04■□□□□ 0.16
UBE3A-220ENST00000630424 BICRAQ9NZM4 1560 aa16.04■□□□□ 0.16
UBE3A-220ENST00000630424 SPTLC2O15270 562 aa16.04■□□□□ 0.16
UBE3A-220ENST00000630424 EEF2P13639 858 aaKnown RBP16.04■□□□□ 0.16
UBE3A-220ENST00000630424 OTUD6BQ8N6M0 293 aa16.04■□□□□ 0.16
UBE3A-220ENST00000630424 INCENPQ9NQS7 918 aa16.04■□□□□ 0.16
UBE3A-220ENST00000630424 PODXL2Q9NZ53 605 aa16.04■□□□□ 0.16
UBE3A-220ENST00000630424 PDE8AO60658 829 aa16.04■□□□□ 0.16
UBE3A-220ENST00000630424 KIF4AO95239 1232 aa16.04■□□□□ 0.16
UBE3A-220ENST00000630424 ADCY5O95622 1261 aa16.04■□□□□ 0.16
UBE3A-220ENST00000630424 PLCB3Q01970 1234 aa16.04■□□□□ 0.16
UBE3A-220ENST00000630424 DTHD1Q6ZMT9 781 aa16.04■□□□□ 0.16
UBE3A-220ENST00000630424 PPP1R14CQ8TAE6 165 aa16.04■□□□□ 0.16
UBE3A-220ENST00000630424 YTHDC2Q9H6S0 1430 aaKnown RBP16.03■□□□□ 0.16
UBE3A-220ENST00000630424 SHTN1A0MZ66 631 aa16.03■□□□□ 0.16
UBE3A-220ENST00000630424 CYLC1P35663 651 aaPredicted RBP16.03■□□□□ 0.16
UBE3A-220ENST00000630424 MRPS9P82933 396 aaKnown RBP16.03■□□□□ 0.16
UBE3A-220ENST00000630424 PUM3Q15397 648 aaKnown RBP16.03■□□□□ 0.16
UBE3A-220ENST00000630424 EAPPQ56P03 285 aaPredicted RBP16.03■□□□□ 0.16
UBE3A-220ENST00000630424 CEP85Q6P2H3 762 aa16.03■□□□□ 0.16
UBE3A-220ENST00000630424 CPXCR1Q8N123 301 aa16.03■□□□□ 0.16
UBE3A-220ENST00000630424 BCS1LQ9Y276 419 aa16.03■□□□□ 0.16
UBE3A-220ENST00000630424 PRDM1O75626 825 aa16.03■□□□□ 0.16
UBE3A-220ENST00000630424 PDE6BP35913 854 aa16.03■□□□□ 0.16
UBE3A-220ENST00000630424 DHX32Q7L7V1 743 aaKnown RBP16.03■□□□□ 0.16
UBE3A-220ENST00000630424 LETM2Q2VYF4 491 aa16.03■□□□□ 0.16
UBE3A-220ENST00000630424 CTAGE1Q96RT6 745 aa16.03■□□□□ 0.16
UBE3A-220ENST00000630424 SOS1Q07889 1333 aaPredicted RBP16.03■□□□□ 0.16
UBE3A-220ENST00000630424 TAF5LO75529 589 aa16.03■□□□□ 0.16
UBE3A-220ENST00000630424 CNPY2Q9Y2B0 182 aa16.03■□□□□ 0.16
UBE3A-220ENST00000630424 MAATS1Q7Z4T9 603 aa16.02■□□□□ 0.16
UBE3A-220ENST00000630424 NIM1KQ8IY84 436 aa16.02■□□□□ 0.16
UBE3A-220ENST00000630424 RNF216Q9NWF9 866 aaPredicted RBP16.02■□□□□ 0.16
UBE3A-220ENST00000630424 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.02■□□□□ 0.167e-9■■■□□ 18.2
UBE3A-220ENST00000630424 MAST3O60307 1309 aa16.02■□□□□ 0.16
UBE3A-220ENST00000630424 CCDC171Q6TFL3 1326 aa16.02■□□□□ 0.16
UBE3A-220ENST00000630424 GOLGA6L9A6NEM1 432 aa16.02■□□□□ 0.16
UBE3A-220ENST00000630424 TCP10Q12799 353 aa16.02■□□□□ 0.16
UBE3A-220ENST00000630424 IL27Q8NEV9 243 aa16.02■□□□□ 0.16
UBE3A-220ENST00000630424 TBC1D32Q96NH3 1257 aa16.02■□□□□ 0.16
UBE3A-220ENST00000630424 DACT1Q9NYF0 836 aa16.02■□□□□ 0.16
UBE3A-220ENST00000630424 CREB3L3Q68CJ9 461 aa16.02■□□□□ 0.15
UBE3A-220ENST00000630424 EHBP1Q8NDI1 1231 aa16.02■□□□□ 0.15
UBE3A-220ENST00000630424 KLHDC4Q8TBB5 520 aa16.02■□□□□ 0.15
UBE3A-220ENST00000630424 WDR66Q8TBY9 1149 aa16.02■□□□□ 0.15
UBE3A-220ENST00000630424 ZNF594Q96JF6 807 aaPredicted RBP16.02■□□□□ 0.15
UBE3A-220ENST00000630424 DUOX2Q9NRD8 1548 aa16.02■□□□□ 0.15
UBE3A-220ENST00000630424 CEP83Q9Y592 693 aa16.02■□□□□ 0.15
UBE3A-220ENST00000630424 CCDC117Q8IWD4 279 aaPredicted RBP16.01■□□□□ 0.15
UBE3A-220ENST00000630424 SYCP2Q9BX26 1530 aa16.01■□□□□ 0.15
UBE3A-220ENST00000630424 CHMP2AO43633 222 aa16.01■□□□□ 0.15
UBE3A-220ENST00000630424 CCDC175P0C221 793 aa16.01■□□□□ 0.15
UBE3A-220ENST00000630424 SNW1Q13573 536 aaKnown RBP16.01■□□□□ 0.15
UBE3A-220ENST00000630424 MSL1Q68DK7 614 aa16.01■□□□□ 0.15
UBE3A-220ENST00000630424 NSMFQ6X4W1 530 aa16.01■□□□□ 0.15
UBE3A-220ENST00000630424 ABCC10Q5T3U5 1492 aa16.01■□□□□ 0.15
UBE3A-220ENST00000630424 NOP56O00567 594 aaKnown RBP16.01■□□□□ 0.15
UBE3A-220ENST00000630424 FNBP4Q8N3X1 1017 aaPredicted RBP16.01■□□□□ 0.15
UBE3A-220ENST00000630424 METTL22Q9BUU2 404 aaPredicted RBP16.01■□□□□ 0.15
UBE3A-220ENST00000630424 PTPDC1A2A3K4 754 aa16.01■□□□□ 0.15
UBE3A-220ENST00000630424 ERICH4A6NGS2 130 aa16.01■□□□□ 0.15
UBE3A-220ENST00000630424 FERP16591 822 aa16.01■□□□□ 0.15
UBE3A-220ENST00000630424 STX17P56962 302 aa16.01■□□□□ 0.15
UBE3A-220ENST00000630424 DNM1Q05193 864 aaKnown RBP16.01■□□□□ 0.15
UBE3A-220ENST00000630424 HOOK2Q96ED9 719 aa16.01■□□□□ 0.15
UBE3A-220ENST00000630424 PUS7Q96PZ0 661 aaKnown RBP16.01■□□□□ 0.15
UBE3A-220ENST00000630424 DCTPP1Q9H773 170 aa16.01■□□□□ 0.15
UBE3A-220ENST00000630424 ARMT1Q9H993 441 aa16.01■□□□□ 0.15
UBE3A-220ENST00000630424 BIRC3Q13489 604 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms