RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 BIN2Q9UBW5 565 aaPredicted RBP10.62□□□□□ -0.71
GGA3-223ENST00000621870 AK2P54819 239 aa10.61□□□□□ -0.71
GGA3-223ENST00000621870 AMPD3Q01432 767 aa10.61□□□□□ -0.71
GGA3-223ENST00000621870 MAP3K15Q6ZN16 1313 aa10.61□□□□□ -0.71
GGA3-223ENST00000621870 SKIDA1Q1XH10 827 aa10.61□□□□□ -0.71
GGA3-223ENST00000621870 FCHSD1Q86WN1 690 aa10.61□□□□□ -0.71
GGA3-223ENST00000621870 CPXCR1Q8N123 301 aa10.61□□□□□ -0.71
GGA3-223ENST00000621870 SPATA5Q8NB90 893 aa10.61□□□□□ -0.71
GGA3-223ENST00000621870 RRP36Q96EU6 259 aaKnown RBP10.61□□□□□ -0.71
GGA3-223ENST00000621870 C6orf50Q9HD87 102 aa10.61□□□□□ -0.71
GGA3-223ENST00000621870 AXIN2Q9Y2T1 843 aa10.61□□□□□ -0.71
GGA3-223ENST00000621870 MROH5Q6ZUA9 1318 aa10.61□□□□□ -0.71
GGA3-223ENST00000621870 PCCAP05165 728 aaPredicted RBP10.61□□□□□ -0.71
GGA3-223ENST00000621870 AFMP43652 599 aa10.61□□□□□ -0.71
GGA3-223ENST00000621870 CPLX3Q8WVH0 158 aa10.61□□□□□ -0.71
GGA3-223ENST00000621870 CNKSR1Q969H4 720 aa10.61□□□□□ -0.71
GGA3-223ENST00000621870 KDM6BO15054 1643 aa10.61□□□□□ -0.71
GGA3-223ENST00000621870 ERBB4Q15303 1308 aa10.6□□□□□ -0.71
GGA3-223ENST00000621870 TRIM75PA6NK02 468 aa10.6□□□□□ -0.71
GGA3-223ENST00000621870 EPB41L2O43491 1005 aaKnown RBP10.6□□□□□ -0.71
GGA3-223ENST00000621870 SERPINB2P05120 415 aa10.6□□□□□ -0.71
GGA3-223ENST00000621870 USP8P40818 1118 aa10.6□□□□□ -0.71
GGA3-223ENST00000621870 LRRC24Q50LG9 513 aa10.6□□□□□ -0.71
GGA3-223ENST00000621870 CCDC183Q5T5S1 534 aa10.6□□□□□ -0.71
GGA3-223ENST00000621870 ERMNQ8TAM6 284 aa10.6□□□□□ -0.71
GGA3-223ENST00000621870 TGFBRAP1Q8WUH2 860 aa10.6□□□□□ -0.71
GGA3-223ENST00000621870 TCHPQ9BT92 498 aa10.6□□□□□ -0.71
GGA3-223ENST00000621870 ZSCAN16Q9H4T2 348 aaPredicted RBP10.6□□□□□ -0.71
GGA3-223ENST00000621870 GREM2Q9H772 168 aa10.6□□□□□ -0.71
GGA3-223ENST00000621870 MAST3O60307 1309 aa10.6□□□□□ -0.71
GGA3-223ENST00000621870 ZNF532Q9HCE3 1301 aa10.6□□□□□ -0.71
GGA3-223ENST00000621870 DTNBO60941 627 aa10.6□□□□□ -0.71
GGA3-223ENST00000621870 CALML3P27482 149 aa10.6□□□□□ -0.71
GGA3-223ENST00000621870 MTIF2P46199 727 aaKnown RBP10.6□□□□□ -0.71
GGA3-223ENST00000621870 BCAMP50895 628 aa10.6□□□□□ -0.71
GGA3-223ENST00000621870 SCNN1DP51172 638 aa10.6□□□□□ -0.71
GGA3-223ENST00000621870 CCDC40Q4G0X9 1142 aa10.6□□□□□ -0.71
GGA3-223ENST00000621870 FKBP15Q5T1M5 1219 aa10.6□□□□□ -0.71
GGA3-223ENST00000621870 DPY19L2Q6NUT2 758 aa10.6□□□□□ -0.71
GGA3-223ENST00000621870 TBC1D22AQ8WUA7 517 aa10.6□□□□□ -0.71
GGA3-223ENST00000621870 TBCAO75347 108 aaKnown RBP10.6□□□□□ -0.71
GGA3-223ENST00000621870 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.6□□□□□ -0.71
GGA3-223ENST00000621870 EAF2Q96CJ1 260 aaPredicted RBP10.6□□□□□ -0.71
GGA3-223ENST00000621870 DDX19AQ9NUU7 478 aaKnown RBP10.6□□□□□ -0.71
GGA3-223ENST00000621870 CYP27B1O15528 508 aa10.59□□□□□ -0.71
GGA3-223ENST00000621870 SYKP43405 635 aa10.59□□□□□ -0.71
GGA3-223ENST00000621870 ARHGAP29Q52LW3 1261 aa10.59□□□□□ -0.71
GGA3-223ENST00000621870 BEND3Q5T5X7 828 aa10.59□□□□□ -0.71
GGA3-223ENST00000621870 HELLSQ9NRZ9 838 aa10.59□□□□□ -0.71
GGA3-223ENST00000621870 RBM27Q9P2N5 1060 aaKnown RBP10.59□□□□□ -0.71
GGA3-223ENST00000621870 SRP68Q9UHB9 627 aaKnown RBP10.59□□□□□ -0.71
GGA3-223ENST00000621870 FAM135BQ49AJ0 1406 aa10.59□□□□□ -0.71
GGA3-223ENST00000621870 ADGRL3Q9HAR2 1447 aa10.59□□□□□ -0.71
GGA3-223ENST00000621870 ZSCAN22P10073 491 aaPredicted RBP10.59□□□□□ -0.71
GGA3-223ENST00000621870 SH2D4AQ9H788 454 aa10.59□□□□□ -0.71
GGA3-223ENST00000621870 ARGLU1Q9NWB6 273 aaPredicted RBP10.59□□□□□ -0.71
GGA3-223ENST00000621870 ZBTB21Q9ULJ3 1066 aa10.59□□□□□ -0.71
GGA3-223ENST00000621870 AATKQ6ZMQ8 1374 aa10.59□□□□□ -0.71
GGA3-223ENST00000621870 PLA2R1Q13018 1463 aa10.59□□□□□ -0.71
GGA3-223ENST00000621870 PTPDC1A2A3K4 754 aa10.59□□□□□ -0.71
GGA3-223ENST00000621870 PARP1P09874 1014 aaKnown RBP10.59□□□□□ -0.71
GGA3-223ENST00000621870 TDRD12Q587J7 1177 aaKnown RBP10.59□□□□□ -0.71
GGA3-223ENST00000621870 BICD1Q96G01 975 aa10.59□□□□□ -0.71
GGA3-223ENST00000621870 PKD2L1Q9P0L9 805 aa10.59□□□□□ -0.71
GGA3-223ENST00000621870 SETD1BQ9UPS6 1966 aaKnown RBP10.58□□□□□ -0.71
GGA3-223ENST00000621870 TRIM21P19474 475 aaKnown RBP10.58□□□□□ -0.72
GGA3-223ENST00000621870 SFPQP23246 707 aaKnown RBP eCLIP10.58□□□□□ -0.72
GGA3-223ENST00000621870 GNA11P29992 359 aa10.58□□□□□ -0.72
GGA3-223ENST00000621870 KIAA1328Q86T90 577 aa10.58□□□□□ -0.72
GGA3-223ENST00000621870 TEKT1Q969V4 418 aa10.58□□□□□ -0.72
GGA3-223ENST00000621870 USP40Q9NVE5 1235 aa10.58□□□□□ -0.72
GGA3-223ENST00000621870 RAD50Q92878 1312 aa10.58□□□□□ -0.72
GGA3-223ENST00000621870 ABCC3O15438 1527 aa10.58□□□□□ -0.72
GGA3-223ENST00000621870 B4DLN1 442 aa10.58□□□□□ -0.72
GGA3-223ENST00000621870 USP17L12C9JPN9 530 aa10.58□□□□□ -0.72
GGA3-223ENST00000621870 USP17L21D6R901 530 aa10.58□□□□□ -0.72
GGA3-223ENST00000621870 BACH1O14867 736 aa10.58□□□□□ -0.72
GGA3-223ENST00000621870 FGFR1OPO95684 399 aaKnown RBP10.58□□□□□ -0.72
GGA3-223ENST00000621870 SLC1A4P43007 532 aa10.58□□□□□ -0.72
GGA3-223ENST00000621870 ZNF165P49910 485 aa10.58□□□□□ -0.72
GGA3-223ENST00000621870 MRPL12P52815 198 aaKnown RBP10.58□□□□□ -0.72
GGA3-223ENST00000621870 HSP90B2PQ58FF3 399 aa10.58□□□□□ -0.72
GGA3-223ENST00000621870 ZNF397Q8NF99 534 aaPredicted RBP10.58□□□□□ -0.72
GGA3-223ENST00000621870 PUS3Q9BZE2 481 aaKnown RBP10.58□□□□□ -0.72
GGA3-223ENST00000621870 CTAGE5O15320 804 aa10.58□□□□□ -0.72
GGA3-223ENST00000621870 CCP110O43303 1012 aa10.58□□□□□ -0.72
GGA3-223ENST00000621870 SEC24BO95487 1268 aa10.58□□□□□ -0.72
GGA3-223ENST00000621870 POTEJP0CG39 1038 aa10.58□□□□□ -0.72
GGA3-223ENST00000621870 CETN1Q12798 172 aa10.58□□□□□ -0.72
GGA3-223ENST00000621870 HSP90AA4PQ58FG1 418 aa10.58□□□□□ -0.72
GGA3-223ENST00000621870 RTL9Q8NET4 1388 aa10.57□□□□□ -0.72
GGA3-223ENST00000621870 MMP10P09238 476 aa10.57□□□□□ -0.72
GGA3-223ENST00000621870 DNM1Q05193 864 aaKnown RBP10.57□□□□□ -0.72
GGA3-223ENST00000621870 CHRNDQ07001 517 aa10.57□□□□□ -0.72
GGA3-223ENST00000621870 MYL10Q9BUA6 226 aa10.57□□□□□ -0.72
GGA3-223ENST00000621870 ARHGEF10LQ9HCE6 1279 aa10.57□□□□□ -0.72
GGA3-223ENST00000621870 SEC31BQ9NQW1 1179 aa10.57□□□□□ -0.72
GGA3-223ENST00000621870 BMP15O95972 392 aa10.57□□□□□ -0.72
GGA3-223ENST00000621870 DESP17661 470 aa10.57□□□□□ -0.72
GGA3-223ENST00000621870 NSMFQ6X4W1 530 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms